BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038265
         (1109 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik...   392   e-106
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   389   e-105
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   389   e-105
ref|XP_002331405.1| predicted protein [Populus trichocarpa]           389   e-105
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]     385   e-104
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe...   384   e-104
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   383   e-104
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        381   e-103
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   381   e-103
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]     380   e-103
gb|AFW76096.1| pseudouridylate synthase [Zea mays]                    380   e-103
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              380   e-103
gb|ACF83621.1| unknown [Zea mays]                                     380   e-103
gb|EMT12212.1| Protein kinase APK1B, chloroplastic [Aegilops tau...   378   e-102
ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [A...   377   e-102
gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indi...   377   e-102
ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778...   374   e-101
dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japo...   373   e-101
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   372   e-100
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   372   e-100

>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 410

 Score =  392 bits (1008), Expect = e-106
 Identities = 203/344 (59%), Positives = 252/344 (73%), Gaps = 9/344 (2%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            R GRW R+TFKIV+SYHG SFDGWQKQP L+TVQ VVEQCLGRFVDEKKA+ LKE+ +P+
Sbjct: 77   RGGRWARLTFKIVVSYHGGSFDGWQKQPELYTVQSVVEQCLGRFVDEKKAQMLKEKGLPL 136

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            EG   VAGRTDKGVTAL QVCSFYTW KDV C DI  +I+  APGK+R + VT VSRVFH
Sbjct: 137  EGAATVAGRTDKGVTALNQVCSFYTWSKDVRCQDIADAIDNAAPGKLRTVSVTEVSRVFH 196

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQLTS 578
            PNF+A WR+Y YI P ND+EE      +   SN +   E+ Q+ +++ENH    E ++ S
Sbjct: 197  PNFSAKWRRYLYIFPFNDDEE------DREQSNDT--GENAQILKIKENH---HEHEVVS 245

Query: 579  SHLNE---------DGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSS 731
             + +E         D     +E KP+ FS+S+V++LLQ+LEGK LSYKMFARDTKASR+ 
Sbjct: 246  DNCSEANVGNTNITDDVGLEAEKKPQMFSVSRVNKLLQKLEGKLLSYKMFARDTKASRNE 305

Query: 732  GPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAG 911
            GP TECF+FHARA E ++ C+  ++E  +R+MC+EL+ANRFLR+M+RVLVAT+IREAAAG
Sbjct: 306  GPPTECFVFHARAREYRLPCS--EHEKGRRIMCIELIANRFLRRMIRVLVATSIREAAAG 363

Query: 912  ADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            AD+DALIKLMD             DGLCL++VGY EF    CLI
Sbjct: 364  ADEDALIKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPLDCLI 407


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  389 bits (999), Expect = e-105
 Identities = 206/337 (61%), Positives = 249/337 (73%), Gaps = 2/337 (0%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            ++GRW R+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LGRFVDEKKA+QLKE+  P+
Sbjct: 127  KSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPL 186

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            EGC  VAGRTDKGV+ALQQVCSFYTWRKDV   +I  +IN+VAPGK+R   ++ VSR FH
Sbjct: 187  EGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFH 246

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSN--SSIGCEDDQMNELQENHPVEKEQQL 572
            PNF+A WR+Y YI PLND E       EG   N  S   CE  Q NE  E   +  E+ +
Sbjct: 247  PNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCE-KQRNECGE---LASEENV 302

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
             +S ++++        KPRSFS+ +V+QLLQQLEGK LSYKMFARDTKASR+ GP TECF
Sbjct: 303  ENSIISDED-ELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 361

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            ++HARA ET++     D+E   RVMCVEL+ANRFLRKMVRVLVAT++REAAAGA +DAL+
Sbjct: 362  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 419

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            KLMD             DGLCL++VGY EF  + CLI
Sbjct: 420  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 456


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  389 bits (999), Expect = e-105
 Identities = 206/337 (61%), Positives = 249/337 (73%), Gaps = 2/337 (0%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            ++GRW R+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LGRFVDEKKA+QLKE+  P+
Sbjct: 118  KSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPL 177

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            EGC  VAGRTDKGV+ALQQVCSFYTWRKDV   +I  +IN+VAPGK+R   ++ VSR FH
Sbjct: 178  EGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFH 237

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSN--SSIGCEDDQMNELQENHPVEKEQQL 572
            PNF+A WR+Y YI PLND E       EG   N  S   CE  Q NE  E   +  E+ +
Sbjct: 238  PNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCE-KQRNECGE---LASEENV 293

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
             +S ++++        KPRSFS+ +V+QLLQQLEGK LSYKMFARDTKASR+ GP TECF
Sbjct: 294  ENSIISDED-ELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 352

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            ++HARA ET++     D+E   RVMCVEL+ANRFLRKMVRVLVAT++REAAAGA +DAL+
Sbjct: 353  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 410

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            KLMD             DGLCL++VGY EF  + CLI
Sbjct: 411  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 447


>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
          Length = 428

 Score =  389 bits (999), Expect = e-105
 Identities = 206/337 (61%), Positives = 249/337 (73%), Gaps = 2/337 (0%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            ++GRW R+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LGRFVDEKKA+QLKE+  P+
Sbjct: 98   KSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPL 157

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            EGC  VAGRTDKGV+ALQQVCSFYTWRKDV   +I  +IN+VAPGK+R   ++ VSR FH
Sbjct: 158  EGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFH 217

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSN--SSIGCEDDQMNELQENHPVEKEQQL 572
            PNF+A WR+Y YI PLND E       EG   N  S   CE  Q NE  E   +  E+ +
Sbjct: 218  PNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHENCE-KQRNECGE---LASEENV 273

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
             +S ++++        KPRSFS+ +V+QLLQQLEGK LSYKMFARDTKASR+ GP TECF
Sbjct: 274  ENSIISDED-ELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 332

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            ++HARA ET++     D+E   RVMCVEL+ANRFLRKMVRVLVAT++REAAAGA +DAL+
Sbjct: 333  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 390

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            KLMD             DGLCL++VGY EF  + CLI
Sbjct: 391  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 427


>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
          Length = 446

 Score =  385 bits (989), Expect = e-104
 Identities = 202/347 (58%), Positives = 250/347 (72%), Gaps = 2/347 (0%)
 Frame = +3

Query: 9    STEVTEPVKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKA 188
            + EV++    R+GRWER+TFKI++SY+G +FDGWQKQPGL+TVQ +VE+ LGRFVDEKKA
Sbjct: 103  TVEVSDEKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEKKA 162

Query: 189  KQLKERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRAL 368
            + LKE+S P+EGC VVAGRTDKGV+A++QVCSFYTWRKDV   DI  +IN VAPGK+R +
Sbjct: 163  QLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLRVV 222

Query: 369  EVTGVSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSI--GCEDDQMNELQE 542
             V+ VSRVFHPNF+A WR Y YI PL++ E     C       + I  G  ++Q N   E
Sbjct: 223  SVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGYLE 282

Query: 543  NHPVEKEQQLTSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKAS 722
            N   E  + L  S    D     +  KP  FS+ +V+QLLQQLE K LSYKMFARDTKAS
Sbjct: 283  NIRWENVENLIIS----DNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKAS 338

Query: 723  RSSGPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREA 902
            R+ GP TECFM+HARAAE +I C++ D+   + VMCVELVANRFLRKMVRVLVAT+IREA
Sbjct: 339  RNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLVATSIREA 398

Query: 903  AAGADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            AAGA++DAL+KLM              DGLCL++VGY EF  + CL+
Sbjct: 399  AAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 445


>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  384 bits (985), Expect = e-104
 Identities = 197/359 (54%), Positives = 249/359 (69%), Gaps = 16/359 (4%)
 Frame = +3

Query: 15   EVTEPVKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQ 194
            E   P + + GRW R+TFKIV+SYHG SFDGWQ+QPGL+TVQ VVE+ LG+FVDE+KA+ 
Sbjct: 70   ESLPPSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGKFVDERKAQM 129

Query: 195  LKERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEV 374
            LK++ +P+EG  +VAGRTDKGVTA+ QVCSFYTWRKDV   DI  +IN  APGK+R + V
Sbjct: 130  LKDKGLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAINSAAPGKLRVVSV 189

Query: 375  TGVSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPV 554
            T VSR FHPNF A WR Y YI P ND E++                  +Q N+  EN   
Sbjct: 190  TEVSRAFHPNFTAKWRHYLYIFPFNDEEDM------------------EQSNQSGEN--A 229

Query: 555  EKEQQLTSSHLNEDGCPAISE----------------LKPRSFSISKVDQLLQQLEGKSL 686
            +  + L + H +++GC   +E                LKPR F++S+V+QLLQ+LEGK L
Sbjct: 230  QNFKSLENYHEHKNGCDQCNEANVGNLVINDNEDLETLKPREFTVSRVNQLLQKLEGKLL 289

Query: 687  SYKMFARDTKASRSSGPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKM 866
            SYKMFARDTK SR+ GP TECF++HARA E+K+ C+  ++E  +RVMC+ELVANRFLR+M
Sbjct: 290  SYKMFARDTKPSRNEGPPTECFLYHARAKESKLPCS--EHEKGRRVMCIELVANRFLRRM 347

Query: 867  VRVLVATAIREAAAGADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            VRVLVAT+IREAAAGAD+DAL+KLMD             DGLCL++VGY EF  + CLI
Sbjct: 348  VRVLVATSIREAAAGADEDALLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  383 bits (984), Expect = e-104
 Identities = 199/338 (58%), Positives = 242/338 (71%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            K R GRW R+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE  LGRFVDE+KA+QLKE+++
Sbjct: 99   KDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQQLKEKNL 158

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            PVEG + VAGRTDKGVTALQQVCSFYTW+KDV   DI  +IN  APGK+R + V+ VSR+
Sbjct: 159  PVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRI 218

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNF+A WR YFYI PLND ++   +  E       I   +    +  E        + 
Sbjct: 219  FHPNFSAKWRHYFYIFPLNDGDD-GEQISENEMDIQKISFNEKYGEQGSECPAQYNGGEN 277

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
            T + + +D     S  KP +FSIS+VDQLL+QLEGK LSYK+FARDTKASR+ GP TECF
Sbjct: 278  TENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECF 337

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            +FHARA E +++    D     +VMC+ELVANRFLRKMVRVLVAT+IREAAAGA+ DAL+
Sbjct: 338  VFHARATEARLQ--FSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALL 395

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLIR 1046
            KLMD             DGLCL++VG+ EF  + C IR
Sbjct: 396  KLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFIR 433


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  381 bits (979), Expect = e-103
 Identities = 198/335 (59%), Positives = 243/335 (72%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            R+GRW R TFK+VL YHG SFDGWQKQPGL+TVQG+VE+ LGRFVDEKKA+ LK++ +P+
Sbjct: 120  RSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLPL 179

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            E C VVAGRTDKGVTALQQVCSFYTWRKD++C DI  +IN  A GK++A  V+ VSRVFH
Sbjct: 180  EACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFH 239

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQLTS 578
            PNF+A WR+Y YI P ND E+            S+   E+ +  E  E+   E   +   
Sbjct: 240  PNFSAKWRRYLYIFPFNDEED---------EEQSNKNGENLETYEKIESGCGEWNDESFG 290

Query: 579  SHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECFMF 758
            + + +D     S  KP SFS+S+VDQLL+ LEGK LSYKMFARDTKASR+ GP TECF++
Sbjct: 291  NLIIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMFARDTKASRNEGPPTECFIY 350

Query: 759  HARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALIKL 938
            HARAAE ++  +  D    +++MCVELVANRFLRKMVRVLVAT+IREAAAGA++DAL+KL
Sbjct: 351  HARAAEARLPTS--DCTEGRKIMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKL 408

Query: 939  MDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            MD             DGLCL++VGY EFK   CLI
Sbjct: 409  MDATCRRATAPPAPPDGLCLVDVGYSEFKPNNCLI 443


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  381 bits (979), Expect = e-103
 Identities = 202/338 (59%), Positives = 246/338 (72%), Gaps = 3/338 (0%)
 Frame = +3

Query: 39   RTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMPV 218
            R GRW R+ FKI LSYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDEKKA+QLKE   P+
Sbjct: 113  RFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQQLKEACKPL 172

Query: 219  EGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVFH 398
            EGC VVAGRTDKGV+AL+QVCSFYTWRKDV   +I  +IN  APGKIR + V+ VSRVFH
Sbjct: 173  EGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFH 232

Query: 399  PNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCE--DDQMNELQENHPVEKEQQL 572
            PNF+A WR+Y YI P+ND E+   + F+     +    E  D+Q N   E    E  ++L
Sbjct: 233  PNFSAKWRRYLYIFPINDGED-SEQSFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEEL 291

Query: 573  TSSHLNE-DGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATEC 749
             +S  +E +G       KPR FSI +V+QLLQQLEGK LSYK+FARDTKASR+ GP TEC
Sbjct: 292  ITSDKDELEGAK-----KPRIFSICRVNQLLQQLEGKLLSYKIFARDTKASRNVGPPTEC 346

Query: 750  FMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDAL 929
            F++HARA E ++ C   D+   ++VMCVELVANRFLRKMVRVLVAT+IREAAAGA+DDAL
Sbjct: 347  FIYHARATEARLPC--PDHGEGRKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDAL 404

Query: 930  IKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            +KLMD             DGLCL +VGY EF  + C++
Sbjct: 405  LKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIV 442


>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
          Length = 444

 Score =  380 bits (975), Expect = e-103
 Identities = 202/347 (58%), Positives = 249/347 (71%), Gaps = 2/347 (0%)
 Frame = +3

Query: 9    STEVTEPVKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKA 188
            + EV++    R+GRWER+TFKI++SY+G +FDGWQKQPGL+TVQ +VE+ LGRFVDEKKA
Sbjct: 103  TVEVSDEKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEKKA 162

Query: 189  KQLKERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRAL 368
            + LKE+S P+EGC VVAGRTDKGV+A++QVCSFYTWRKDV   DI  +IN VAPGK+R +
Sbjct: 163  QLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLRVV 222

Query: 369  EVTGVSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSI--GCEDDQMNELQE 542
             V+ VSRVFHPNF+A WR Y YI PL++ E     C       + I  G  ++Q N   E
Sbjct: 223  SVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGYLE 282

Query: 543  NHPVEKEQQLTSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKAS 722
            N   E  + L  S    D     +  KP  FS+ +V+QLLQQLE K LSYKMFARDTKAS
Sbjct: 283  NIRWENVENLIIS----DNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKAS 338

Query: 723  RSSGPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREA 902
            R+ GP TECFM+HARAAE +I C+  D+   + VMCVELVANRFLRKMVRVLVAT+IREA
Sbjct: 339  RNIGPPTECFMYHARAAEARIPCS--DHGEGREVMCVELVANRFLRKMVRVLVATSIREA 396

Query: 903  AAGADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            AAGA++DAL+KLM              DGLCL++VGY EF  + CL+
Sbjct: 397  AAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 443


>gb|AFW76096.1| pseudouridylate synthase [Zea mays]
          Length = 422

 Score =  380 bits (975), Expect = e-103
 Identities = 194/337 (57%), Positives = 239/337 (70%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            K R GRWER+TFK+V+SYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDE+KAKQL+ RS+
Sbjct: 118  KGRGGRWERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSL 177

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            P+EGC +VAGRTDKGVTALQQVCSFYTWRKDV  GDI  +INE AP K++ L V+ VSR 
Sbjct: 178  PIEGCAIVAGRTDKGVTALQQVCSFYTWRKDVKSGDIKGAINEAAPDKLKPLHVSEVSRE 237

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNFAA WR+Y YI PL+++ +LI                   + E Q +  +E  +  
Sbjct: 238  FHPNFAAKWRRYMYIFPLDEDADLI-------------------LGEAQSSKTLENSEH- 277

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
                           +KP+SF +SKVD++L+ L GK+LSYKMFARDT+ASRS GP TECF
Sbjct: 278  --------------NIKPQSFDVSKVDEILKPLAGKTLSYKMFARDTQASRSVGPPTECF 323

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            MFH+RAA  K+    ED++    VMCVELVANRFLRKMVRVLVATAIREAAAGA  DAL+
Sbjct: 324  MFHSRAAVAKLHSANEDHKGGMVVMCVELVANRFLRKMVRVLVATAIREAAAGAGADALL 383

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
             LM+             +GLCL++VGY +F ++ C I
Sbjct: 384  NLMEATDRRATAPPAPPEGLCLVDVGYEDFDKQRCFI 420


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  380 bits (975), Expect = e-103
 Identities = 199/338 (58%), Positives = 239/338 (70%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            K R GRW R+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE  LGRFVDE+KA+QLKE+++
Sbjct: 99   KDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQQLKEKNL 158

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            PVEG + VAGRTDKGVTALQQVCSFYTW+KDV   DI  +IN  APGK+R + V+ VSR+
Sbjct: 159  PVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRI 218

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNF+A WR YFYI PLND                  G + +Q++        E E  +
Sbjct: 219  FHPNFSAKWRHYFYIFPLND------------------GDDGEQIS--------ENEMDI 252

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
                 NE      +  KP +FSIS+VDQLL+QLEGK LSYK+FARDTKASR+ GP TECF
Sbjct: 253  QKISFNE------NRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECF 306

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            +FHARA E +++    D     +VMC+ELVANRFLRKMVRVLVAT+IREAAAGA+ DAL+
Sbjct: 307  VFHARATEARLQ--FSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALL 364

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLIR 1046
            KLMD             DGLCL++VG+ EF  + C IR
Sbjct: 365  KLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFIR 402


>gb|ACF83621.1| unknown [Zea mays]
          Length = 414

 Score =  380 bits (975), Expect = e-103
 Identities = 194/337 (57%), Positives = 239/337 (70%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            K R GRWER+TFK+V+SYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDE+KAKQL+ RS+
Sbjct: 110  KGRGGRWERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSL 169

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            P+EGC +VAGRTDKGVTALQQVCSFYTWRKDV  GDI  +INE AP K++ L V+ VSR 
Sbjct: 170  PIEGCAIVAGRTDKGVTALQQVCSFYTWRKDVKSGDIKGAINEAAPDKLKPLHVSEVSRE 229

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNFAA WR+Y YI PL+++ +LI                   + E Q +  +E  +  
Sbjct: 230  FHPNFAAKWRRYMYIFPLDEDADLI-------------------LGEAQSSKTLENSEH- 269

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
                           +KP+SF +SKVD++L+ L GK+LSYKMFARDT+ASRS GP TECF
Sbjct: 270  --------------NIKPQSFDVSKVDEILKPLAGKTLSYKMFARDTQASRSVGPPTECF 315

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            MFH+RAA  K+    ED++    VMCVELVANRFLRKMVRVLVATAIREAAAGA  DAL+
Sbjct: 316  MFHSRAAVAKLHSANEDHKGGMVVMCVELVANRFLRKMVRVLVATAIREAAAGAGADALL 375

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
             LM+             +GLCL++VGY +F ++ C I
Sbjct: 376  NLMEATDRRATAPPAPPEGLCLVDVGYEDFDKQRCFI 412


>gb|EMT12212.1| Protein kinase APK1B, chloroplastic [Aegilops tauschii]
          Length = 914

 Score =  378 bits (971), Expect = e-102
 Identities = 200/338 (59%), Positives = 241/338 (71%), Gaps = 1/338 (0%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            KAR GRWER  FKIVLSYHG SFDGWQKQP L+TVQG+VE+ LG+FVDE+KAKQL+ERS+
Sbjct: 611  KARGGRWERANFKIVLSYHGGSFDGWQKQPDLNTVQGLVEKHLGQFVDERKAKQLQERSL 670

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            P+EGC  VAGRTDKGVTALQQVCSFYTWRKDV  GDI  +INE AP KI++L V+ VSR 
Sbjct: 671  PIEGCATVAGRTDKGVTALQQVCSFYTWRKDVQPGDIKDTINEAAPDKIKSLVVSEVSRE 730

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNF+A WR+Y YI PL+ +   I+              ED+Q + + EN         
Sbjct: 731  FHPNFSAKWRRYLYIFPLDGDATSIS--------------EDEQSSTILEN--------- 767

Query: 573  TSSHLNEDGCPAISELK-PRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATEC 749
                          ELK P+SF ++KVD++++QLEGK LSYK+FARDT+ASRS GPATEC
Sbjct: 768  -------------PELKAPQSFDVAKVDKIIRQLEGKMLSYKIFARDTQASRSDGPATEC 814

Query: 750  FMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDAL 929
            FM+H+RAA TK+    E+ +    VMCVELVANRFLRKMVRVLVAT IREAAAGAD+DAL
Sbjct: 815  FMYHSRAAVTKLYSADENCKEGTTVMCVELVANRFLRKMVRVLVATTIREAAAGADEDAL 874

Query: 930  IKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            + LMD             +GLCL++VGY +F E+ C I
Sbjct: 875  LNLMDATCRRATAPPAPAEGLCLVDVGYEDFDEQRCFI 912


>ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [Amborella trichopoda]
            gi|548854646|gb|ERN12556.1| hypothetical protein
            AMTR_s00025p00208060 [Amborella trichopoda]
          Length = 371

 Score =  377 bits (967), Expect = e-102
 Identities = 199/343 (58%), Positives = 243/343 (70%), Gaps = 6/343 (1%)
 Frame = +3

Query: 36   ARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSMP 215
            +R GRW R TFKIV+SYHG SFDGWQKQPGL TVQG VE  LG+FVD+KKA+QL+++S+P
Sbjct: 43   SRGGRWARRTFKIVVSYHGSSFDGWQKQPGLRTVQGSVESVLGKFVDDKKAQQLRDKSLP 102

Query: 216  VEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRVF 395
            VEGC  VAGRTDKGV+ALQQVCSFYTWR DV   +I H+IN VAPG++RA+ V+ VSR F
Sbjct: 103  VEGCATVAGRTDKGVSALQQVCSFYTWRTDVKTQEIEHAINTVAPGQLRAVYVSEVSRAF 162

Query: 396  HPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQLT 575
            HPNF+A WR Y YI PL   EE             S+G E+     +Q N+  E+ ++  
Sbjct: 163  HPNFSAKWRHYLYIFPLKVEEE-------------SLGLENIGGGFIQCNNHDEERKEWV 209

Query: 576  SSHLNEDGCPA------ISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGP 737
             + L E+GC        +   KP  FS+SKVD++L+QLEG+ LSYKMFARDTK+SR+ GP
Sbjct: 210  ENGL-ENGCSIMVDEDYLERSKPMRFSVSKVDRILRQLEGRLLSYKMFARDTKSSRNEGP 268

Query: 738  ATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGAD 917
             TECF++HARAAET++ C  E   N   VMCVELVANRFLRKMVRVLVAT+IREAAAGA 
Sbjct: 269  PTECFLYHARAAETRLPCPDEVDGNGLGVMCVELVANRFLRKMVRVLVATSIREAAAGAG 328

Query: 918  DDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLIR 1046
            DD L++LMD             DGLCL++VGY +FK     IR
Sbjct: 329  DDVLLRLMDATCRRATAPPAPPDGLCLVDVGYEDFKPGNTFIR 371


>gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indica Group]
            gi|125598125|gb|EAZ37905.1| hypothetical protein
            OsJ_22255 [Oryza sativa Japonica Group]
          Length = 417

 Score =  377 bits (967), Expect = e-102
 Identities = 199/342 (58%), Positives = 240/342 (70%), Gaps = 1/342 (0%)
 Frame = +3

Query: 21   TEPVKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLK 200
            T+  K R GRWER+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDEKKAKQL+
Sbjct: 108  TKSSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLE 167

Query: 201  ERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTG 380
             RS+P+EGC VVAGRTDKGVTALQQVCSFYTWRKDV   DI  +IN+ AP K+R L V+ 
Sbjct: 168  ARSLPLEGCAVVAGRTDKGVTALQQVCSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQ 227

Query: 381  VSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEK 560
            VSR FHPNFAA WR+Y YI PL+++ +LI+                    E Q    VE 
Sbjct: 228  VSREFHPNFAAKWRRYLYIFPLDEDVKLIS-------------------GEEQSAKTVEG 268

Query: 561  EQQLTSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPA 740
             +                 +KP+SF + KVD++++QLEGKSLSYKMFARDT+ASRS GP 
Sbjct: 269  PE---------------CNIKPQSFDVGKVDKIIRQLEGKSLSYKMFARDTQASRSVGPP 313

Query: 741  TECFMFHARAAETKIRCNLED-YENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGAD 917
            TECFMFH+RAA  K+    E+  E   R +C+ELVANRFLRKMVRVLVATAIREAAAGA+
Sbjct: 314  TECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRKMVRVLVATAIREAAAGAE 373

Query: 918  DDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            +DAL+ LM+             DGLCL++VGY +F  + C I
Sbjct: 374  EDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQRCFI 415


>ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778125 [Setaria italica]
          Length = 422

 Score =  374 bits (960), Expect = e-101
 Identities = 196/337 (58%), Positives = 242/337 (71%)
 Frame = +3

Query: 33   KARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLKERSM 212
            K R GRWER+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDE+KAKQL+ RS+
Sbjct: 119  KDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSL 178

Query: 213  PVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTGVSRV 392
            P+EG  +VAGRTDKGVTALQQVCSFYTWRKDV   DI  +I E AP K++ L V+ V+R 
Sbjct: 179  PIEGGAIVAGRTDKGVTALQQVCSFYTWRKDVKSEDIKDAIKEAAPDKLKPLHVSEVARE 238

Query: 393  FHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEKEQQL 572
            FHPNFAA WR+Y YI PL+++ + I    EGH             +E+ +N         
Sbjct: 239  FHPNFAAKWRRYMYIFPLDEDAKSIIG--EGH-------------SEVLKN--------- 274

Query: 573  TSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPATECF 752
             S H+          +KP+SF ++KVD++L++L GK+LSYKMFARDT+ASRS GP TECF
Sbjct: 275  -SEHI----------IKPQSFDVAKVDEILRKLAGKTLSYKMFARDTQASRSVGPPTECF 323

Query: 753  MFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGADDDALI 932
            MFH+RAA  K+ C  EDY+    VMCVELVANRFLRKMVRVLVATAIREAAAGA +DAL+
Sbjct: 324  MFHSRAAAAKLYCANEDYKEGLSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL 383

Query: 933  KLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
             LM+             +GLCL++VGY +F ++ C I
Sbjct: 384  NLMEATDRRATAPPAPPEGLCLVDVGYKDFSKQRCFI 420


>dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japonica Group]
          Length = 495

 Score =  373 bits (957), Expect = e-101
 Identities = 197/338 (58%), Positives = 238/338 (70%), Gaps = 1/338 (0%)
 Frame = +3

Query: 21   TEPVKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDEKKAKQLK 200
            T+  K R GRWER+TFKIVLSYHG SFDGWQKQPGL+TVQG+VE+ LG+FVDEKKAKQL+
Sbjct: 108  TKSSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLE 167

Query: 201  ERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKIRALEVTG 380
             RS+P+EGC VVAGRTDKGVTALQQVCSFYTWRKDV   DI  +IN+ AP K+R L V+ 
Sbjct: 168  ARSLPLEGCAVVAGRTDKGVTALQQVCSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQ 227

Query: 381  VSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQENHPVEK 560
            VSR FHPNFAA WR+Y YI PL+++ +LI+                    E Q    VE 
Sbjct: 228  VSREFHPNFAAKWRRYLYIFPLDEDVKLIS-------------------GEEQSAKTVEG 268

Query: 561  EQQLTSSHLNEDGCPAISELKPRSFSISKVDQLLQQLEGKSLSYKMFARDTKASRSSGPA 740
             +                 +KP+SF + KVD++++QLEGKSLSYKMFARDT+ASRS GP 
Sbjct: 269  PE---------------CNIKPQSFDVGKVDKIIRQLEGKSLSYKMFARDTQASRSVGPP 313

Query: 741  TECFMFHARAAETKIRCNLED-YENCQRVMCVELVANRFLRKMVRVLVATAIREAAAGAD 917
            TECFMFH+RAA  K+    E+  E   R +C+ELVANRFLRKMVRVLVATAIREAAAGA+
Sbjct: 314  TECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRKMVRVLVATAIREAAAGAE 373

Query: 918  DDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEK 1031
            +DAL+ LM+             DGLCL++VGY +F  +
Sbjct: 374  EDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 411


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  372 bits (955), Expect = e-100
 Identities = 204/352 (57%), Positives = 248/352 (70%), Gaps = 5/352 (1%)
 Frame = +3

Query: 3    YISTEVTEP-VKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDE 179
            Y S E+    VK +TGRW R TFKIVLSY G SFDGWQKQPGL+TVQG+VE+ LG+FVDE
Sbjct: 98   YNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDE 157

Query: 180  KKAKQLKERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKI 359
            KKA+ LK++ +P+EGC +VAGRTDKGVTAL+QVCSFYTWR DV   DI  SIN  APGK+
Sbjct: 158  KKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKL 217

Query: 360  RALEVTGVSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQ 539
            R   V+ VSR+FHPNF+A WR+Y YILPLND E +        W N     E+ +     
Sbjct: 218  RTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENM--EPDSTTWEN----VENREEENFV 271

Query: 540  ENHPVEKEQQLTSSHLNEDGCPAISEL----KPRSFSISKVDQLLQQLEGKSLSYKMFAR 707
            +      E+ +   H N    P   EL    KP++FSI++V+QLL++LEGK LSYKMFAR
Sbjct: 272  KIEASNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFAR 331

Query: 708  DTKASRSSGPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVAT 887
            DTKASR+ GP TECF++HARAAET++ C LE     + VMCVELVANRFLRKMVRVLVAT
Sbjct: 332  DTKASRNEGPPTECFVYHARAAETRLPC-LEQGVG-RSVMCVELVANRFLRKMVRVLVAT 389

Query: 888  AIREAAAGADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            AIREAAAGA +DAL++LMD             DGL L++VGY +F  + C I
Sbjct: 390  AIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  372 bits (955), Expect = e-100
 Identities = 204/352 (57%), Positives = 248/352 (70%), Gaps = 5/352 (1%)
 Frame = +3

Query: 3    YISTEVTEP-VKARTGRWERITFKIVLSYHGWSFDGWQKQPGLHTVQGVVEQCLGRFVDE 179
            Y S E+    VK +TGRW R TFKIVLSY G SFDGWQKQPGL+TVQG+VE+ LG+FVDE
Sbjct: 98   YNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDE 157

Query: 180  KKAKQLKERSMPVEGCIVVAGRTDKGVTALQQVCSFYTWRKDVSCGDIMHSINEVAPGKI 359
            KKA+ LK++ +P+EGC +VAGRTDKGVTAL+QVCSFYTWR DV   DI  SIN  APGK+
Sbjct: 158  KKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKL 217

Query: 360  RALEVTGVSRVFHPNFAATWRQYFYILPLNDNEELITRCFEGHWSNSSIGCEDDQMNELQ 539
            R   V+ VSR+FHPNF+A WR+Y YILPLND E +        W N     E+ +     
Sbjct: 218  RTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENM--EPDSTTWEN----VENREEENFV 271

Query: 540  ENHPVEKEQQLTSSHLNEDGCPAISEL----KPRSFSISKVDQLLQQLEGKSLSYKMFAR 707
            +      E+ +   H N    P   EL    KP++FSI++V+QLL++LEGK LSYKMFAR
Sbjct: 272  KIEASNGEKCVDGIHDNLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFAR 331

Query: 708  DTKASRSSGPATECFMFHARAAETKIRCNLEDYENCQRVMCVELVANRFLRKMVRVLVAT 887
            DTKASR+ GP TECF++HARAAET++ C LE     + VMCVELVANRFLRKMVRVLVAT
Sbjct: 332  DTKASRNEGPPTECFVYHARAAETRLPC-LEQGVG-RSVMCVELVANRFLRKMVRVLVAT 389

Query: 888  AIREAAAGADDDALIKLMDXXXXXXXXXXXXXDGLCLLNVGYGEFKEKFCLI 1043
            AIREAAAGA +DAL++LMD             DGL L++VGY +F  + C I
Sbjct: 390  AIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441