BLASTX nr result
ID: Zingiber24_contig00038263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038263
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18220.1| hypothetical protein PRUPE_ppa001933mg [Prunus pe... 77 3e-12
ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
emb|CBI16904.3| unnamed protein product [Vitis vinifera] 71 1e-10
emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera] 71 1e-10
gb|ESW11366.1| hypothetical protein PHAVU_008G023900g [Phaseolus... 70 4e-10
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati... 70 4e-10
ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group] g... 70 4e-10
gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japo... 70 4e-10
gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat doma... 70 4e-10
ref|XP_003621610.1| Pentatricopeptide repeat-containing protein ... 69 6e-10
gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indi... 68 1e-09
gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protei... 68 1e-09
gb|EMT10346.1| Pentatricopeptide repeat-containing protein [Aegi... 67 3e-09
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,... 66 4e-09
ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Popu... 66 5e-09
ref|XP_002331286.1| predicted protein [Populus trichocarpa] 66 5e-09
gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis] 65 1e-08
gb|EOX98930.1| Pentatricopeptide repeat (PPR) superfamily protei... 64 2e-08
>gb|EMJ18220.1| hypothetical protein PRUPE_ppa001933mg [Prunus persica]
Length = 739
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/61 (52%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVED--EEGERKDQLE 174
E+K+E+H FLVGDKAHP+CNE+YE+LD L++EMM GY P+++ +++ EE E +D+L+
Sbjct: 674 EVKDELHAFLVGDKAHPRCNEVYEKLDLLVAEMMRVGYRPEIDALLDEEMEEQELEDKLK 733
Query: 175 L 177
+
Sbjct: 734 I 734
>ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLE 174
E+++E+HTFLVGDKAHP+ EIYE+ L+ EM WAGY+PD++ F+ DEE E +D E
Sbjct: 786 EVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDID-FMLDEEMEEQDPYE 842
>ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLE 174
E+++E+HTFLVGDKAHP+ EIYE+ L+ EM WAGY+PD+++ + DEE E +D E
Sbjct: 786 EVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDSML-DEEVEEQDPYE 842
>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEE 150
EIK+E+H FLVGDKAHP+ EIYE LD L EM W GY+PD + + D+E
Sbjct: 822 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 871
>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEE 150
EIK+E+H FLVGDKAHP+ EIYE LD L EM W GY+PD + + D+E
Sbjct: 775 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 824
>emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEE 150
EIK+E+H FLVGDKAHP+ EIYE LD L EM W GY+PD + + D+E
Sbjct: 759 EIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808
>gb|ESW11366.1| hypothetical protein PHAVU_008G023900g [Phaseolus vulgaris]
Length = 891
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLE 174
E+++E+HTFLVGD+AHP+ EIYE+ + L+ EM WAGY+P ++ F+ DEE E +D E
Sbjct: 825 EVRDEVHTFLVGDRAHPRSEEIYEQTNLLVEEMKWAGYVPYID-FLLDEEVEEQDVYE 881
>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
Length = 905
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQ-LE 174
E+++EMH FLVGDKAHP+ E+YE L++LI EM +GY PD +FVE DEEG + LE
Sbjct: 839 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLE 898
Query: 175 LL 180
LL
Sbjct: 899 LL 900
>ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa
Japonica Group]
Length = 863
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQ-LE 174
E+++EMH FLVGDKAHP+ E+YE L++LI EM +GY PD +FVE DEEG + LE
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLE 856
Query: 175 LL 180
LL
Sbjct: 857 LL 858
>gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQ-LE 174
E+++EMH FLVGDKAHP+ E+YE L++LI EM +GY PD +FVE DEEG + LE
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLE 856
Query: 175 LL 180
LL
Sbjct: 857 LL 858
>gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQ-LE 174
E+++EMH FLVGDKAHP+ E+YE L++LI EM +GY PD +FVE DEEG + LE
Sbjct: 325 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLE 384
Query: 175 LL 180
LL
Sbjct: 385 LL 386
>ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 881
Score = 68.9 bits (167), Expect = 6e-10
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLE 174
++++E+H FLVGDKAHP+ EIY++ L+ EM W GY+P+++ F+ DEE + +D E
Sbjct: 818 QVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSYE 875
>gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQ-LE 174
E ++EMH FLVGDKAHP+ E+YE L++LI EM +GY PD +FVE DEEG + LE
Sbjct: 733 EAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLE 792
Query: 175 LL 180
LL
Sbjct: 793 LL 794
>gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 860
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLEL 177
E+K+E+H FLVGDKAHP+C EIYE+L L+ EM Y+ D++ F+E+E + K+Q EL
Sbjct: 797 EVKDEVHAFLVGDKAHPRCKEIYEKLGILVDEMRC--YVADIDFFLEEEANQLKEQEEL 853
>gb|EMT10346.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 860
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVE-DEEGERKDQLEL 177
E++NEMH FLVGD HP+ E+Y+ L +L+ EM +GY PD +F E DEEG +Q +L
Sbjct: 795 EVQNEMHGFLVGDNVHPRSRELYDMLHDLLDEMKLSGYDPDSASFAEVDEEGSASEQDDL 854
Query: 178 LAV 186
L +
Sbjct: 855 LGM 857
>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 939
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQ 168
E+K+E+H FLVG+K HP+ EIY+ L L+ EM W GY+PD++ F+ DEE E +Q
Sbjct: 824 EVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDID-FLIDEESEEYEQ 878
>ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Populus trichocarpa]
gi|550340791|gb|ERP62042.1| hypothetical protein
POPTR_0004s11010g [Populus trichocarpa]
Length = 897
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLELL 180
E+K+E+H FLVGDK HP+ EIYE+L LI EM GY+PD + + DEE E QLE L
Sbjct: 829 ELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLL-DEEVEEPAQLEEL 887
>ref|XP_002331286.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKDQLELL 180
E+K+E+H FLVGDK HP+ EIYE+L LI EM GY+PD + + DEE E QLE L
Sbjct: 829 ELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLL-DEEVEEPAQLEEL 887
>gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]
Length = 879
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLP----DLETFVEDEEGE 156
E+K+E+H FLVGDKAHP+C EIYE+L L+ EM WAGY D + VE++E E
Sbjct: 821 EVKDEVHAFLVGDKAHPRCIEIYEKLHLLVGEMKWAGYSLYAHFDEDVEVEEQEEE 876
>gb|EOX98930.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 642
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = +1
Query: 1 EIKNEMHTFLVGDKAHPKCNEIYERLDELISEMMWAGYLPDLETFVEDEEGERKD 165
E+ ++H F++GD AHPK NEI RL++LI ++M GY+PD + ++D EGE++D
Sbjct: 514 EVNKQIHAFILGDTAHPKINEINRRLNQLIHKLMGMGYVPDTDFVLQDLEGEQRD 568