BLASTX nr result
ID: Zingiber24_contig00038244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038244
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS48785.1| putative ATP-dependent RNA helicase YTHDC2 [Triti... 184 1e-44
ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helica... 182 7e-44
ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g... 178 8e-43
gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japo... 178 8e-43
gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indi... 178 8e-43
gb|AFW84952.1| hypothetical protein ZEAMMB73_244337 [Zea mays] 177 2e-42
ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica... 176 3e-42
ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [S... 175 7e-42
ref|NP_001170323.1| uncharacterized protein LOC100384291 [Zea ma... 175 7e-42
ref|XP_006646361.1| PREDICTED: probable ATP-dependent RNA helica... 169 4e-40
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 153 3e-35
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 151 1e-34
ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, part... 141 1e-31
ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helica... 140 2e-31
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 138 1e-30
gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [T... 137 2e-30
gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [T... 137 2e-30
ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica... 137 2e-30
ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Pop... 137 3e-30
ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [A... 132 8e-29
>gb|EMS48785.1| putative ATP-dependent RNA helicase YTHDC2 [Triticum urartu]
Length = 1185
Score = 184 bits (467), Expect = 1e-44
Identities = 102/179 (56%), Positives = 120/179 (67%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMY++NCS+VG YPLL LA E+ VAP +
Sbjct: 954 RGDGGMYVKNCSVVGSYPLLLLATEIAVAPPDD----VSDEDDEGSSGDEAGKSTLGQQK 1009
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
EEIMSSP+N VSVV+D WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPPALGA+
Sbjct: 1010 EEIMSSPDNTVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGAT 1069
Query: 361 VYAIACILSCDGLPSALADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YAIACILS DGLP LA + S + D + S +G R+GGFI PGGFL SL+SD
Sbjct: 1070 MYAIACILSYDGLPGNLAT----KHGSGQSSADASGSAEG-RKGGFIPPGGFLMSLLSD 1123
>ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Setaria
italica]
Length = 1197
Score = 182 bits (461), Expect = 7e-44
Identities = 104/185 (56%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+NCS+VG +PLL LA EMVVAP P LV H
Sbjct: 964 RGDGGMYIKNCSVVGSHPLLLLATEMVVAP---PDDDSDEEEDSSEDEAEKSTLVQ--HK 1018
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
EEIMSSP+N VSVV+D WLR ++TALDVAQIYCLRERL SAILFK K PQ VLP ALGAS
Sbjct: 1019 EEIMSSPDNTVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKYPQDVLPQALGAS 1078
Query: 361 VYAIACILSCDGLPSAL-ADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YAIACILS DGLP+ + ++ P + S ++ + + QG+R G+I PGGFL SL++D
Sbjct: 1079 MYAIACILSYDGLPAMVPSNDLPANRGSGQNSAEASSFSQGRR-AGYIPPGGFLVSLLAD 1137
Query: 538 NVRTP 552
P
Sbjct: 1138 KPHQP 1142
>ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa
Japonica Group]
Length = 1223
Score = 178 bits (452), Expect = 8e-43
Identities = 101/180 (56%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPL+ LA EMVVAP P ++ H
Sbjct: 988 RGDGGMYIKNSSVVGSYPLIILATEMVVAP---PEDDDSDEEDGDSSEDETEKVTLGQH- 1043
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
+EIMSSP+N+VSVVID WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPP LGA+
Sbjct: 1044 KEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGAT 1103
Query: 361 VYAIACILSCDGLPSAL-ADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YAIACILS DGLP+ + +D Q S + + ++ QG+R G+I PGGFL SL+SD
Sbjct: 1104 MYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRV-GYIPPGGFLMSLLSD 1162
>gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japonica Group]
Length = 1286
Score = 178 bits (452), Expect = 8e-43
Identities = 101/180 (56%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPL+ LA EMVVAP P ++ H
Sbjct: 1051 RGDGGMYIKNSSVVGSYPLIILATEMVVAP---PEDDDSDEEDGDSSEDETEKVTLGQH- 1106
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
+EIMSSP+N+VSVVID WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPP LGA+
Sbjct: 1107 KEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGAT 1166
Query: 361 VYAIACILSCDGLPSAL-ADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YAIACILS DGLP+ + +D Q S + + ++ QG+R G+I PGGFL SL+SD
Sbjct: 1167 MYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRV-GYIPPGGFLMSLLSD 1225
>gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group]
Length = 1277
Score = 178 bits (452), Expect = 8e-43
Identities = 101/180 (56%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPL+ LA EMVVAP P ++ H
Sbjct: 1042 RGDGGMYIKNSSVVGSYPLIILATEMVVAP---PEDDDSDEEDGDSSEDETEKVTLGQH- 1097
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
+EIMSSP+N+VSVVID WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPP LGA+
Sbjct: 1098 KEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGAT 1157
Query: 361 VYAIACILSCDGLPSAL-ADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YAIACILS DGLP+ + +D Q S + + ++ QG+R G+I PGGFL SL+SD
Sbjct: 1158 MYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRV-GYIPPGGFLMSLLSD 1216
>gb|AFW84952.1| hypothetical protein ZEAMMB73_244337 [Zea mays]
Length = 325
Score = 177 bits (448), Expect = 2e-42
Identities = 105/196 (53%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPLL +A EMVVAP + H
Sbjct: 91 RGDGGMYIKNSSVVGSYPLLLIAAEMVVAPPDDDSDEDEEDSSEDEAE----ESTLVQHK 146
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
EEIMSSP++ VSVV+D WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPPALGAS
Sbjct: 147 EEIMSSPDSIVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGAS 206
Query: 361 VYAIACILSCDGLPSALADAPP----YRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSL 528
+YAI CILS DGLPS + PP + S +D + +K QG+R G+I P GFL SL
Sbjct: 207 MYAITCILSFDGLPSMV---PPNDLSANRGSGQDLAEASKFSQGRR-AGYIPPSGFLMSL 262
Query: 529 ISDNVRTPNVHIVRNA 576
++D RT N +N+
Sbjct: 263 LAD--RTHNAPSFQNS 276
>ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
distachyon]
Length = 1272
Score = 176 bits (447), Expect = 3e-42
Identities = 96/180 (53%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+NCS+VG YPL+ LA EM VAP S
Sbjct: 1038 RGDGGMYIKNCSVVGSYPLVLLATEMAVAPPDDSDEEEGSSEDEAEKN------TSGQQN 1091
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
EEIMS P+N VSV+ID WLR ++TALD+AQIYCLRERL SAILFK K+PQ VLPPALGA+
Sbjct: 1092 EEIMSLPDNTVSVIIDRWLRFDATALDIAQIYCLRERLASAILFKVKHPQDVLPPALGAT 1151
Query: 361 VYAIACILSCDGLPSALADAP-PYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
+YA+ACILS DGLP + A + S + + ++ QG+R +I PGGFL SL+SD
Sbjct: 1152 MYAVACILSYDGLPGMVESADLSTNRGSNQSSTEASRFTQGRR-ASYIPPGGFLMSLLSD 1210
>ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
gi|241928377|gb|EES01522.1| hypothetical protein
SORBIDRAFT_03g035700 [Sorghum bicolor]
Length = 1299
Score = 175 bits (444), Expect = 7e-42
Identities = 103/183 (56%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPLL +A EMVVAP P LV H
Sbjct: 1077 RGDGGMYIKNSSVVGSYPLLLIATEMVVAP---PDDDSDEEENSSEDEAEESTLVQ--HK 1131
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
E+IMSSP++ VSVV+D WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPPALGAS
Sbjct: 1132 EDIMSSPDSTVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGAS 1191
Query: 361 VYAIACILSCDGLPSALADAPP----YRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSL 528
YAIACILS DGLP A PP Q S ++ + ++ QG+R G+I P GFL SL
Sbjct: 1192 TYAIACILSYDGLP---AMVPPNDLSANQGSGQNLAEASRFSQGRRT-GYIPPSGFLMSL 1247
Query: 529 ISD 537
++D
Sbjct: 1248 LAD 1250
>ref|NP_001170323.1| uncharacterized protein LOC100384291 [Zea mays]
gi|224035055|gb|ACN36603.1| unknown [Zea mays]
Length = 336
Score = 175 bits (444), Expect = 7e-42
Identities = 105/196 (53%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPLL +A EMVVAP + H
Sbjct: 102 RGDGGMYIKNSSVVGSYPLLLIAAEMVVAPPDDDSDEDEEDSSEDEAE----ESTLVQHK 157
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
EEIMSSP++ VSVV+D WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPPALGAS
Sbjct: 158 EEIMSSPDSIVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGAS 217
Query: 361 VYAIACILSCDGLPSALADAPP----YRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSL 528
+YAI CILS DGLPS + PP + S +D + +K QG+R G+I P GFL SL
Sbjct: 218 MYAITCILSFDGLPSMV---PPNDLSANRGSGQDLAEASKFSQGRR-AGYIPPIGFLMSL 273
Query: 529 ISDNVRTPNVHIVRNA 576
++D RT N +N+
Sbjct: 274 LAD--RTHNAPSFQNS 287
>ref|XP_006646361.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Oryza
brachyantha]
Length = 1181
Score = 169 bits (429), Expect = 4e-40
Identities = 99/181 (54%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGMYI+N S+VG YPL+ LA EMVVAP +
Sbjct: 959 RGDGGMYIKNSSVVGTYPLIILATEMVVAPPDDDDSDDEDDTDKG----------TLGQQ 1008
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
+EIMSSP+N+VSVVID WLR ++TALDVAQIYCLRERL SAILFK K+PQ VLPP LGA+
Sbjct: 1009 KEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGAT 1068
Query: 361 VYAIACILSCDGLPSALA--DAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLIS 534
+YAIACILS DGLP+ + DA R S + ++ QG+R +I PGGFL SL+S
Sbjct: 1069 MYAIACILSYDGLPAMVTTDDAGTSRGSS---STESSRFAQGRRV-AYIPPGGFLMSLLS 1124
Query: 535 D 537
D
Sbjct: 1125 D 1125
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 153 bits (387), Expect = 3e-35
Identities = 91/190 (47%), Positives = 118/190 (62%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQLVSSSHG 180
RGDGGM+IRNC+++GP PLL LA E+VVAP ++ G
Sbjct: 953 RGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKA------------------NNKLNGQQG 994
Query: 181 EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALGAS 360
E+IMSSP+N V+VV+D W ESTALDVAQIYCLRERL +AI FKA + + VLPP LGAS
Sbjct: 995 EKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGAS 1054
Query: 361 VYAIACILSCDGLPS-ALADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGGFLRSLISD 537
VYAIACILS DGL +L+ S + +++ S G+R+ G P FL++L+S
Sbjct: 1055 VYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRRMG-QNPNNFLKTLMSH 1113
Query: 538 NVR--TPNVH 561
R +P+ H
Sbjct: 1114 GTRHKSPSKH 1123
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 151 bits (382), Expect = 1e-34
Identities = 92/201 (45%), Positives = 119/201 (59%), Gaps = 14/201 (6%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSG-----------PXXXXXXXXXXXXXXX 147
RGDGGM+IRNC+++GP PLL LA E+VVAP G
Sbjct: 965 RGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKGNDDDDEDCDDDSDGDDIDEDDSEGDGK 1024
Query: 148 XXXQLVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNP 327
++ GE+IMSSP+N V+VV+D W ESTALDVAQIYCLRERL +AI FKA +
Sbjct: 1025 EANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHA 1084
Query: 328 QAVLPPALGASVYAIACILSCDGLPS-ALADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQ 504
+ VLPP LGASVYAIACILS DGL +L+ S + +++ S G+R+ G
Sbjct: 1085 REVLPPMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRRMG-QN 1143
Query: 505 PGGFLRSLISDNVR--TPNVH 561
P FL++L+S R +P+ H
Sbjct: 1144 PNNFLKTLMSHGTRHKSPSKH 1164
>ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, partial [Citrus clementina]
gi|557539285|gb|ESR50329.1| hypothetical protein
CICLE_v10033885mg, partial [Citrus clementina]
Length = 1197
Score = 141 bits (356), Expect = 1e-31
Identities = 82/192 (42%), Positives = 104/192 (54%), Gaps = 10/192 (5%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPT---------SGPXXXXXXXXXXXXXXXXX 153
RGDGGM++RNC++VGP PLL LA E+ VAP
Sbjct: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEECMEI 1027
Query: 154 XQLVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQA 333
S HGE +MSSP+ +V+V++D WL STALD+AQIYCLRERL +AILFK +PQ
Sbjct: 1028 DDKTSEQHGENVMSSPDKSVTVLVDRWLYFGSTALDIAQIYCLRERLSAAILFKVTHPQK 1087
Query: 334 VLPPALGASVYAIACILSCDGLPSALADAPPYRQ-QSPRDKVDMNKSIQGKRQGGFIQPG 510
LPP L AS+YA+A ILS DG A S +++K + +G P
Sbjct: 1088 ALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPS 1147
Query: 511 GFLRSLISDNVR 546
FL SL+S N R
Sbjct: 1148 NFLMSLMSPNTR 1159
>ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Citrus
sinensis]
Length = 1233
Score = 140 bits (353), Expect = 2e-31
Identities = 82/192 (42%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPT---------SGPXXXXXXXXXXXXXXXXX 153
RGDGGM++RNC++VGP PLL LA E+ VAP
Sbjct: 976 RGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEI 1035
Query: 154 XQLVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQA 333
S HGE +MSSP+ +V+V++D WL STALD+AQIYCLRERL AILFK +PQ
Sbjct: 1036 DDKTSGQHGENVMSSPDKSVTVLVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQK 1095
Query: 334 VLPPALGASVYAIACILSCDGLPSALADAPPYRQ-QSPRDKVDMNKSIQGKRQGGFIQPG 510
LPP L AS+YA+A ILS DG A S +++K + +G P
Sbjct: 1096 ALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPS 1155
Query: 511 GFLRSLISDNVR 546
FL SL+S N R
Sbjct: 1156 NFLMSLMSPNTR 1167
>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1229
Score = 138 bits (347), Expect = 1e-30
Identities = 85/210 (40%), Positives = 115/210 (54%), Gaps = 17/210 (8%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPT------------SGPXXXXXXXXXXXXXX 144
RG+ GM IRNC++VGP LL LA E+VV P +
Sbjct: 961 RGEWGMNIRNCTIVGPLALLLLATEIVVTPAKDHDEEDNEGDDNNDGSDTAPEDEGDEDK 1020
Query: 145 XXXXQLVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKN 324
+ + E+IMSSP+N+V+VV+D WL STAL+VAQIYCLRERL +AILF+ +
Sbjct: 1021 MEIDDRLGGHNDEKIMSSPDNSVNVVVDRWLYFSSTALEVAQIYCLRERLSAAILFRVMH 1080
Query: 325 PQAVLPPALGASVYAIACILSCDG-----LPSALADAPPYRQQSPRDKVDMNKSIQGKRQ 489
P+ LPPAL AS+ A AC+LS DG LP D+ S D +++ + G+R+
Sbjct: 1081 PKQELPPALAASMRATACVLSYDGQSGISLPQESVDS----LASMVDATEIDSTAPGRRK 1136
Query: 490 GGFIQPGGFLRSLISDNVRTPNVHIVRNAK 579
P GFLRSL+S+ + H RNA+
Sbjct: 1137 AMGHNPSGFLRSLMSNRRQQTTPHHYRNAR 1166
>gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1207
Score = 137 bits (346), Expect = 2e-30
Identities = 81/179 (45%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSG-----------PXXXXXXXXXXXXXXX 147
RGDGGM+IRNC+++GP PLL LA E+ VAP G
Sbjct: 942 RGDGGMHIRNCTVIGPLPLLLLATEIAVAPAKGNDDNEDDDDDDDDDDGSDDADECDTDG 1001
Query: 148 XXXQLVSSSHG--EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAK 321
+VS S G E++MSSP+N+V VV+D WL STA DVAQIYCLRERL +AIL K
Sbjct: 1002 DEMLMVSKSGGNEEKVMSSPDNSVMVVVDRWLSFRSTAFDVAQIYCLRERLSAAILSKVL 1061
Query: 322 NPQAVLPPALGASVYAIACILSCDGLPSALADAPPYRQQSPRDK-VDMNKSIQGKRQGG 495
+P VL P LGAS+YAIACILS DGL A + + + +++K + G+R G
Sbjct: 1062 HPHQVLTPVLGASIYAIACILSYDGLSGISTRAESVDSLTLKVRATEIDKPLPGRRGSG 1120
>gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao]
Length = 1181
Score = 137 bits (345), Expect = 2e-30
Identities = 77/154 (50%), Positives = 91/154 (59%), Gaps = 13/154 (8%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSG-----------PXXXXXXXXXXXXXXX 147
RGDGGM+IRNC+++GP PLL LA E+ VAP G
Sbjct: 942 RGDGGMHIRNCTVIGPLPLLLLATEIAVAPAKGNDDNEDDDDDDDDDDGSDDADECDTDG 1001
Query: 148 XXXQLVSSSHG--EEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAK 321
+VS S G E++MSSP+N+V VV+D WL STA DVAQIYCLRERL +AIL K
Sbjct: 1002 DEMLMVSKSGGNEEKVMSSPDNSVMVVVDRWLSFRSTAFDVAQIYCLRERLSAAILSKVL 1061
Query: 322 NPQAVLPPALGASVYAIACILSCDGLPSALADAP 423
+P VL P LGAS+YAIACILS DGL P
Sbjct: 1062 HPHQVLTPVLGASIYAIACILSYDGLSGRRGSGP 1095
>ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
lycopersicum]
Length = 1199
Score = 137 bits (345), Expect = 2e-30
Identities = 83/198 (41%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTS---------GPXXXXXXXXXXXXXXXXX 153
RGDGG+ IRNCS++GP PLL LA E+VVAP +
Sbjct: 977 RGDGGLLIRNCSVIGPLPLLLLATEIVVAPGNEDDDDDNDDDESDYEDADEDNGEEGNIK 1036
Query: 154 XQLVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQA 333
L + GE+IMSSP+N V V++D W+ ESTALDVAQIYCLRERL +AILFK +P
Sbjct: 1037 ADLSEAHQGEKIMSSPDNTVKVIVDRWIPFESTALDVAQIYCLRERLAAAILFKVTHPGK 1096
Query: 334 VLPPALGASVYAIACILSCDGLPSALADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPGG 513
VLP L AS+ A+ CILS +G+ P + VD ++ G + G PG
Sbjct: 1097 VLPEVLAASINAMGCILSYNGMSGI---------SLPHEPVDSLTTMVGATEIGQSDPGW 1147
Query: 514 FLRSLISDNVR--TPNVH 561
R ++ N+R PN+H
Sbjct: 1148 NNRMDMNPNIRHQHPNMH 1165
>ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa]
gi|550339560|gb|EEE94565.2| NUCLEAR DEIH-BOXHELICASE
family protein [Populus trichocarpa]
Length = 1207
Score = 137 bits (344), Expect = 3e-30
Identities = 86/202 (42%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXXQ------- 159
RGDGGM+IRNC+++GP PLL LA E+VVAP
Sbjct: 964 RGDGGMHIRNCTVIGPLPLLLLATEIVVAPAENDDEDDEEDDDDYDSADGAESDEDGMEI 1023
Query: 160 --LVSSSHGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQA 333
+ + GE IMSSP+N+V VV+D WL +TALDVAQIYCLRE+L +AILFK +P
Sbjct: 1024 HGKLGTQQGERIMSSPDNSVMVVVDRWLYFGATALDVAQIYCLREQLSAAILFKVTHPHK 1083
Query: 334 VLPPALGASVYAIACILSCDGLPS-ALADAPPYRQQSPRDKVDMNKSIQGKRQGGFIQPG 510
LPPAL A Y ACILS DGL +L S ++++S G+R G P
Sbjct: 1084 ELPPALAAYTYTTACILSNDGLSGISLPGESVESLTSMVHATEIDESCSGRR-GISQNPN 1142
Query: 511 GFLRSLISDNVRT-PNVHIVRN 573
FL SL ++ +T P H R+
Sbjct: 1143 SFLSSLKNNTQQTAPRYHNARS 1164
>ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [Amborella trichopoda]
gi|548857005|gb|ERN14819.1| hypothetical protein
AMTR_s00032p00104970 [Amborella trichopoda]
Length = 1198
Score = 132 bits (331), Expect = 8e-29
Identities = 75/170 (44%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Frame = +1
Query: 1 RGDGGMYIRNCSLVGPYPLLFLAVEMVVAPTSGPXXXXXXXXXXXXXXXXXX--QLVSSS 174
RGD GMY++NC++VGPYPLLF A E+ VAP + V
Sbjct: 948 RGDMGMYVKNCTIVGPYPLLFWATELAVAPLNNEAESDLEDDSSDSEEDEMDIEGSVGRR 1007
Query: 175 HGEEIMSSPENNVSVVIDGWLRLESTALDVAQIYCLRERLFSAILFKAKNPQAVLPPALG 354
HGE ++SSP+N V VV+D W++ +STALDVAQIYCLRE+L +AILFK K LPPAL
Sbjct: 1008 HGERLLSSPDNPVLVVVDRWIKFQSTALDVAQIYCLREQLSAAILFKVKESHKALPPALA 1067
Query: 355 ASVYAIACILS---CDGLPSALADAPPYRQQSPRDKVDMNKSIQGKRQGG 495
AS++AIA ILS +PSA ++D S G G
Sbjct: 1068 ASMHAIAGILSNSNISEMPSAKESIDTLTTMVSTARIDPRNSSNGMHLAG 1117