BLASTX nr result

ID: Zingiber24_contig00038214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038214
         (411 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Ae...    65   1e-08
gb|EEE70097.1| hypothetical protein OsJ_30101 [Oryza sativa Japo...    64   2e-08
gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indi...    64   2e-08
ref|XP_006653917.1| PREDICTED: zinc finger CCCH domain-containin...    63   5e-08
ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835...    58   2e-06
tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea m...    56   6e-06
tpg|DAA57608.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea m...    56   6e-06
ref|NP_001132826.1| uncharacterized protein LOC100194316 [Zea ma...    56   6e-06

>gb|EMT32909.1| Zinc finger CCCH domain-containing protein 44 [Aegilops tauschii]
          Length = 1804

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 47/133 (35%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
 Frame = -3

Query: 397  QTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVA-PAMGNTNQTPGWG 221
            Q  A +NMG  +  Q N + N GW          PGNTNMN  W      G  N     G
Sbjct: 1532 QGAASYNMGMTMPTQQNAVQNMGW------VTPNPGNTNMNMVWATNQGQGTPNAAAMMG 1585

Query: 220  AQLQGNFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQAMN---MNPAWGPGQG 50
            AQ+QG  +M P       G  N  PGWV  +  ++ +    SA        NP  G GQG
Sbjct: 1586 AQMQG-VAMAPWGGAIAQGNANSYPGWVPQVGNASQNAGGWSAPPQGNSVPNPVNGTGQG 1644

Query: 49   NIKPSMNPPVGNP 11
            N   + N P GNP
Sbjct: 1645 NNNVNWNSPSGNP 1657


>gb|EEE70097.1| hypothetical protein OsJ_30101 [Oryza sativa Japonica Group]
          Length = 1764

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/147 (33%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
 Frame = -3

Query: 409  GQTTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAPAMGNTN--- 239
            G T Q+   +NMG  +Q Q N + N GW           GNTNMN  W     G  N   
Sbjct: 1497 GGTAQSATGYNMGLAMQAQPNAVPNMGWVTPNP------GNTNMNMMWATQGQGTPNAAA 1550

Query: 238  ----QTPG-----WGAQLQGNFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQA 86
                Q  G     WGA  QGN +  P W   + G  N + GW AP+Q             
Sbjct: 1551 MVGTQMQGVAMAPWGAIAQGNTNSYPGWGGQV-GNMNQNVGWGAPMQ------------- 1596

Query: 85   MNMNPAW--GPGQGNIKPSMNPPVGNP 11
            +N  P+   G GQ N   + N P GNP
Sbjct: 1597 VNPGPSTGNGTGQDNNNMNWNSPSGNP 1623


>gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indica Group]
          Length = 1764

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/147 (33%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
 Frame = -3

Query: 409  GQTTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAPAMGNTN--- 239
            G T Q+   +NMG  +Q Q N + N GW           GNTNMN  W     G  N   
Sbjct: 1497 GGTAQSATGYNMGLAMQAQPNAVPNMGWVTPNP------GNTNMNMMWATQGQGTPNAAA 1550

Query: 238  ----QTPG-----WGAQLQGNFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQA 86
                Q  G     WGA  QGN +  P W   + G  N + GW AP+Q             
Sbjct: 1551 MVGTQMQGVAMAPWGAIAQGNTNSYPGWGGQV-GNMNQNVGWGAPMQ------------- 1596

Query: 85   MNMNPAW--GPGQGNIKPSMNPPVGNP 11
            +N  P+   G GQ N   + N P GNP
Sbjct: 1597 VNPGPSTGNGTGQDNNNMNWNSPSGNP 1623


>ref|XP_006653917.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Oryza
            brachyantha]
          Length = 1718

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/160 (30%), Positives = 57/160 (35%), Gaps = 27/160 (16%)
 Frame = -3

Query: 409  GQTTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAP--------- 257
            G   Q+   +NMG  +Q Q N + N GW          PGNTNMN  W A          
Sbjct: 1447 GGPAQSATGYNMGLTMQAQTNAVPNMGW------VTPNPGNTNMNMIWAATQGQGTPNAA 1500

Query: 256  ------------------AMGNTNQTPGWGAQLQGNFSMNPVWAMFMPGQPNPSPGWVAP 131
                              A GNTN  PGWG Q+ GN + N  W   + G P PS G    
Sbjct: 1501 AMVGTQMQGVAMAPWGTIAQGNTNSYPGWGPQV-GNMNQNAGWVAPVQGNPGPSTG---- 1555

Query: 130  LQPSTCHTMETSAQAMNMNPAWGPGQGNIKPSMNPPVGNP 11
                                  G GQGN   + N P GNP
Sbjct: 1556 ---------------------NGTGQGNNNMNWNAPSGNP 1574


>ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835763 [Brachypodium
            distachyon]
          Length = 1800

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/133 (33%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
 Frame = -3

Query: 397  QTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAP-AMGNTNQTPGWG 221
            Q    +NMG  +  Q N + N GW           GN+NMN  W A    G  N     G
Sbjct: 1560 QGATSYNMGLTMPTQQNAVPNMGWVTQNP------GNSNMNMMWTATQGQGTPNAATMMG 1613

Query: 220  AQLQGNFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQAMNM---NPAWGPGQG 50
            AQ+QG  +M P W     G  N  PGWV P   +    +  SA        NP  G GQ 
Sbjct: 1614 AQMQG-VAMAP-WGAMAQGNANSYPGWV-PQVGNINQNVGWSAPVQGNPGPNPVNGTGQA 1670

Query: 49   NIKPSMNPPVGNP 11
            N   + N P  NP
Sbjct: 1671 NNNMNWNSPGSNP 1683


>tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
          Length = 1254

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
 Frame = -3

Query: 403  TTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAP-AMGNTNQTPG 227
            + Q  + +NMG  +  Q N + N GW           GNT+MN  W A    G  N  P 
Sbjct: 1016 SAQGASGYNMGVAMPTQPNAVPNMGWLPNP-------GNTSMNMIWAATQGQGTPNAAPM 1068

Query: 226  WGAQLQG------------NFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQAM 83
             G Q+QG            + +  P W     G  N + GW AP+Q +            
Sbjct: 1069 MGGQMQGVPMAPWGGVAAGSANSYPAWGNQQAGNMNQNVGWSAPVQGN------------ 1116

Query: 82   NMNPAWGPGQGNIKPSMNPPVGNP 11
                   PGQ N   + N P GNP
Sbjct: 1117 -------PGQANNNMNWNAPNGNP 1133


>tpg|DAA57608.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
          Length = 992

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
 Frame = -3

Query: 403  TTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAP-AMGNTNQTPG 227
            + Q  + +NMG  +  Q N + N GW           GNT+MN  W A    G  N  P 
Sbjct: 754  SAQGASGYNMGVAMPTQPNAVPNMGWLPNP-------GNTSMNMIWAATQGQGTPNAAPM 806

Query: 226  WGAQLQG------------NFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQAM 83
             G Q+QG            + +  P W     G  N + GW AP+Q +            
Sbjct: 807  MGGQMQGVPMAPWGGVAAGSANSYPAWGNQQAGNMNQNVGWSAPVQGN------------ 854

Query: 82   NMNPAWGPGQGNIKPSMNPPVGNP 11
                   PGQ N   + N P GNP
Sbjct: 855  -------PGQANNNMNWNAPNGNP 871


>ref|NP_001132826.1| uncharacterized protein LOC100194316 [Zea mays]
           gi|194695504|gb|ACF81836.1| unknown [Zea mays]
          Length = 427

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
 Frame = -3

Query: 403 TTQTLADFNMGSGVQNQVNPMVNAGWXXXXXXXXXXPGNTNMNAGWVAP-AMGNTNQTPG 227
           + Q  + +NMG  +  Q N + N GW           GNT+MN  W A    G  N  P 
Sbjct: 189 SAQGASGYNMGVAMPTQPNAVPNMGWLPNP-------GNTSMNMIWAATQGQGTPNAAPM 241

Query: 226 WGAQLQG------------NFSMNPVWAMFMPGQPNPSPGWVAPLQPSTCHTMETSAQAM 83
            G Q+QG            + +  P W     G  N + GW AP+Q +            
Sbjct: 242 MGGQMQGVPMAPWGGVAAGSANSYPAWGNQQAGNMNQNVGWSAPVQGN------------ 289

Query: 82  NMNPAWGPGQGNIKPSMNPPVGNP 11
                  PGQ N   + N P GNP
Sbjct: 290 -------PGQANNNMNWNAPNGNP 306


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