BLASTX nr result
ID: Zingiber24_contig00038170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038170
(249 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arab... 64 3e-08
ref|XP_004301413.1| PREDICTED: RING-H2 finger protein ATL43-like... 63 4e-08
ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group] g... 63 5e-08
ref|XP_003562077.1| PREDICTED: RING-H2 finger protein ATL16-like... 63 5e-08
gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indi... 63 5e-08
ref|XP_006648132.1| PREDICTED: RING-H2 finger protein ATL1-like ... 62 8e-08
ref|XP_004246183.1| PREDICTED: RING-H2 finger protein ATL52-like... 62 8e-08
gb|AFP44689.1| hypothetical protein [Eragrostis tef] 62 1e-07
gb|EMJ26276.1| hypothetical protein PRUPE_ppa017787mg, partial [... 61 1e-07
ref|XP_002300781.1| zinc finger family protein [Populus trichoca... 61 1e-07
ref|XP_004954415.1| PREDICTED: RING-H2 finger protein ATL16-like... 60 2e-07
ref|XP_004296360.1| PREDICTED: RING-H2 finger protein ATL16-like... 60 2e-07
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu... 60 2e-07
ref|XP_006403239.1| hypothetical protein EUTSA_v10003389mg [Eutr... 60 4e-07
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ... 59 5e-07
ref|XP_003601910.1| RING-H2 finger protein ATL5F [Medicago trunc... 59 5e-07
ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like... 59 9e-07
emb|CBI19211.3| unnamed protein product [Vitis vinifera] 59 9e-07
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera] 59 9e-07
ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana] g... 58 1e-06
>ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp.
lyrata] gi|297311259|gb|EFH41683.1| hypothetical protein
ARALYDRAFT_494656 [Arabidopsis lyrata subsp. lyrata]
Length = 379
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVRD 185
H+FH+DCID WLQ+NANCPLCRAR++ D + P D++ A S P+ G T+ VR
Sbjct: 157 HLFHIDCIDVWLQNNANCPLCRARVSCD-TSFPPDRVSA--PSSSPENPIVGSGTVVVRG 213
Query: 186 DEPEV 200
+ V
Sbjct: 214 ENEYV 218
>ref|XP_004301413.1| PREDICTED: RING-H2 finger protein ATL43-like [Fragaria vesca subsp.
vesca]
Length = 416
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVRD 185
H FHV+C+DTWL +++ CPLCR R+ P+ + +++ P + + P DV ID+
Sbjct: 99 HAFHVECVDTWLDAHSTCPLCRYRVDPEDILL-IEQPPTNSQPQTPAPHHQNDVVIDIET 157
Query: 186 DEPEVDWRRQLRRHGSTGARR 248
D P +RR RH S R+
Sbjct: 158 DRP--GFRRVSGRHSSALERQ 176
>ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa
Japonica Group] gi|222623928|gb|EEE58060.1| hypothetical
protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDK 113
HVFHVDCIDTWLQ NANCPLCRA I + + +P+D+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCRAAIATNDSQLPLDQ 198
>ref|XP_003562077.1| PREDICTED: RING-H2 finger protein ATL16-like [Brachypodium
distachyon]
Length = 287
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGD---VTID 176
H FH+DCIDTWLQ +A CP CRA +T VPV PA R G + G+ V ++
Sbjct: 154 HAFHIDCIDTWLQGSARCPFCRADVTVPPLPVPV---PAGRHGRDDDGQQLGERDSVVVE 210
Query: 177 VRDDEPEVDWRRQLRR 224
VR E E R+ ++
Sbjct: 211 VRSGEQESRGRKSKKK 226
>gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDK 113
HVFHVDCIDTWLQ NANCPLCRA I + + +P+D+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCRAAIATNDSQLPLDQ 198
>ref|XP_006648132.1| PREDICTED: RING-H2 finger protein ATL1-like [Oryza brachyantha]
Length = 318
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKL 116
HVFHVDCIDTWLQ NANCPLCRA I + + +P D L
Sbjct: 164 HVFHVDCIDTWLQGNANCPLCRAAIATNNSQLPWDHL 200
>ref|XP_004246183.1| PREDICTED: RING-H2 finger protein ATL52-like [Solanum lycopersicum]
Length = 341
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVR- 182
H FHV CIDTWL+S++NCPLCR+ I AA P P + R + D+ + VR
Sbjct: 165 HAFHVTCIDTWLKSHSNCPLCRSNIVFVTAAPPPVIEPPLINERTSENQPENDIEMGVRE 224
Query: 183 -DDEPEV 200
DDE EV
Sbjct: 225 EDDEQEV 231
>gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVRD 185
H FH+DCID WLQS ANCPLCRA ++ D+LP + P G D+ ID+ D
Sbjct: 116 HAFHIDCIDAWLQSTANCPLCRAAVS------AADRLPL----QVPAGASHDDIVIDISD 165
Query: 186 ----DEP---EVDWRRQLRRHGSTGAR 245
+EP + RR L ST R
Sbjct: 166 LSAAEEPCQHPMTARRSLSMDSSTDKR 192
>gb|EMJ26276.1| hypothetical protein PRUPE_ppa017787mg, partial [Prunus persica]
Length = 418
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVRD 185
H FHV+C+DTWL +++ CPLCR R+ P+ + VD L S+ +S DV +D+ +
Sbjct: 137 HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLL-VDDASKILHSQ-----QSSDVVLDIEN 190
Query: 186 DEPEVDWRRQLRRHGSTGARR 248
D +RR RH G +R
Sbjct: 191 DP---GYRRVSGRHSFAGEQR 208
>ref|XP_002300781.1| zinc finger family protein [Populus trichocarpa]
gi|222842507|gb|EEE80054.1| zinc finger family protein
[Populus trichocarpa]
Length = 344
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTR 155
H FH+DCID W QSNANCPLCR I+ PVD++ A S PQG++
Sbjct: 143 HAFHLDCIDIWFQSNANCPLCRTSISGSGTKYPVDRIIA--PSSSPQGSQ 190
>ref|XP_004954415.1| PREDICTED: RING-H2 finger protein ATL16-like [Setaria italica]
Length = 336
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLP 119
HVFHV CIDTWLQSNANCPLCRA I+ P+D P
Sbjct: 179 HVFHVGCIDTWLQSNANCPLCRAAISGHCLLPPLDHPP 216
>ref|XP_004296360.1| PREDICTED: RING-H2 finger protein ATL16-like [Fragaria vesca subsp.
vesca]
Length = 369
Score = 60.5 bits (145), Expect = 2e-07
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPA 122
HVFH+DCID WLQ+NANCPLCR I+ + P D++ A
Sbjct: 159 HVFHIDCIDVWLQNNANCPLCRTSISSNTTRFPYDRIVA 197
>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein,
putative [Ricinus communis]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPA 122
HVFH+DCID WLQ+NANCPLCR I+ ++P D++ A
Sbjct: 154 HVFHIDCIDVWLQNNANCPLCRNSISSTTRSIPFDRIIA 192
>ref|XP_006403239.1| hypothetical protein EUTSA_v10003389mg [Eutrema salsugineum]
gi|557104352|gb|ESQ44692.1| hypothetical protein
EUTSA_v10003389mg [Eutrema salsugineum]
Length = 377
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +3
Query: 3 FHVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGPQGTRSGDVTIDVR 182
+H+FH+DCID WLQ+NANCPLCR R++ D + P D++ A S P+ T VR
Sbjct: 149 YHLFHIDCIDIWLQNNANCPLCRTRVSCD-VSFPPDRVSAL--SSSPENQVLDSDTTVVR 205
Query: 183 DDEPEVDWRRQLRRHGSTGA 242
+ V L ST +
Sbjct: 206 GENEYVVIELGLGNDNSTSS 225
>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
gi|194707124|gb|ACF87646.1| unknown [Zea mays]
gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 393
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/72 (44%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPV-----DKLPAFLRS---RGPQGTRSG 161
HVFH DCIDTWL S+ CP+CRA + PDA A P D P L P +
Sbjct: 156 HVFHPDCIDTWLASHVTCPVCRANLVPDANAPPPPPPADDDAPELLPPPPVSAPPAAAAA 215
Query: 162 DVTIDVRDDEPE 197
V IDV + E E
Sbjct: 216 AVVIDVDETEEE 227
>ref|XP_003601910.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355490958|gb|AES72161.1| RING-H2 finger protein ATL5F
[Medicago truncatula]
Length = 188
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/38 (57%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
Frame = +3
Query: 3 FHVFHVDCIDTWLQSNANCPLCRARITPDA--AAVPVD 110
+H+FH DCID WL S+ NCP+CR+++TPD AA+P+D
Sbjct: 95 YHIFHQDCIDVWLLSHMNCPVCRSKLTPDVPDAAIPID 132
>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGP 143
H FH+ CIDTWL S+ NCPLCRARI D P++ RS GP
Sbjct: 181 HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGP 226
>emb|CBI19211.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGP 143
H FH+ CIDTWL S+ NCPLCRARI D P++ RS GP
Sbjct: 203 HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGP 248
>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPAFLRSRGP 143
H FH+ CIDTWL S+ NCPLCRARI D P++ RS GP
Sbjct: 181 HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGP 226
>ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana]
gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName:
Full=RING-H2 finger protein ATL16
gi|8843895|dbj|BAA97421.1| unnamed protein product
[Arabidopsis thaliana] gi|30725342|gb|AAP37693.1|
At5g43420 [Arabidopsis thaliana]
gi|110736470|dbj|BAF00203.1| hypothetical protein
[Arabidopsis thaliana] gi|332007576|gb|AED94959.1|
RING-H2 finger protein [Arabidopsis thaliana]
Length = 375
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +3
Query: 6 HVFHVDCIDTWLQSNANCPLCRARITPDAAAVPVDKLPA 122
H+FH+DCID WLQ+NANCPLCR R++ D + P D++ A
Sbjct: 159 HLFHIDCIDVWLQNNANCPLCRTRVSCD-TSFPPDRVSA 196