BLASTX nr result
ID: Zingiber24_contig00038169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038169
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354502.1| PREDICTED: RING-H2 finger protein ATL16-like... 76 4e-12
ref|XP_006403239.1| hypothetical protein EUTSA_v10003389mg [Eutr... 76 4e-12
ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group] g... 76 4e-12
gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indi... 76 5e-12
ref|XP_006648132.1| PREDICTED: RING-H2 finger protein ATL1-like ... 75 9e-12
ref|XP_004247719.1| PREDICTED: RING-H2 finger protein ATL1-like ... 75 1e-11
gb|EMS49014.1| RING-H2 finger protein ATL1 [Triticum urartu] 74 3e-11
ref|XP_002314635.2| zinc finger family protein [Populus trichoca... 72 8e-11
dbj|BAJ96458.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 1e-10
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu... 72 1e-10
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] 72 1e-10
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like... 71 2e-10
ref|XP_006379892.1| hypothetical protein POPTR_0008s16580g, part... 69 7e-10
gb|EOY06016.1| RING/U-box superfamily protein [Theobroma cacao] 69 9e-10
ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arab... 68 1e-09
ref|XP_004954415.1| PREDICTED: RING-H2 finger protein ATL16-like... 68 1e-09
ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana] g... 67 2e-09
gb|EXB54029.1| RING-H2 finger protein ATL16 [Morus notabilis] 66 4e-09
gb|EMS65743.1| RING-H2 finger protein ATL16 [Triticum urartu] 66 4e-09
gb|EMJ25475.1| hypothetical protein PRUPE_ppa019060mg [Prunus pe... 66 4e-09
>ref|XP_006354502.1| PREDICTED: RING-H2 finger protein ATL16-like [Solanum tuberosum]
Length = 349
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Frame = +2
Query: 200 RRLHDDLMMF--AVESRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQEEETVR 373
RR+ D LM++ AVE+RGL +S IR IP F+Y+K + S + CAVCL EFQE E +R
Sbjct: 84 RRVEDPLMIYSPAVENRGLDESVIRSIPVFKYKKREENSRIHSE-CAVCLNEFQENEKLR 142
Query: 374 LLPDCFHVFHV 406
++P+C H+FH+
Sbjct: 143 VIPNCAHIFHI 153
>ref|XP_006403239.1| hypothetical protein EUTSA_v10003389mg [Eutrema salsugineum]
gi|557104352|gb|ESQ44692.1| hypothetical protein
EUTSA_v10003389mg [Eutrema salsugineum]
Length = 377
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +2
Query: 182 ALDRSQRRLHDDLMMFAVE--SRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQ 355
+L R +R D LM+++ E +RGL +S IR IP F++++ D +C+VCL EFQ
Sbjct: 78 SLSRRRRNEQDPLMVYSPELRNRGLDESVIRAIPIFKFKERQDGLEKTSQECSVCLNEFQ 137
Query: 356 EEETVRLLPDCFHVFHV 406
EEE +R++P+C+H+FH+
Sbjct: 138 EEEKLRIIPNCYHLFHI 154
>ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa
Japonica Group] gi|222623928|gb|EEE58060.1| hypothetical
protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +2
Query: 185 LDRSQRRLHDDLMMFAVESRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQEEE 364
+ R +R + E RGL ++ I+ +P FRYRK + A +CAVC+ EFQEEE
Sbjct: 94 ISRRRRGAASSSLPAVAEPRGLEEAAIQSLPAFRYRKAIKDTTADSSECAVCISEFQEEE 153
Query: 365 TVRLLPDCFHVFHV 406
VRLLP C HVFHV
Sbjct: 154 RVRLLPSCLHVFHV 167
>gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +2
Query: 185 LDRSQRRLHDDLMMFAVESRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQEEE 364
+ R +R + E RGL ++ I+ +P FRYRK + A +CAVC+ EFQEEE
Sbjct: 94 ISRRRRGAASSSLPEVAEPRGLEEAAIQSLPAFRYRKAIKDTTADSSECAVCISEFQEEE 153
Query: 365 TVRLLPDCFHVFHV 406
VRLLP C HVFHV
Sbjct: 154 RVRLLPSCLHVFHV 167
>ref|XP_006648132.1| PREDICTED: RING-H2 finger protein ATL1-like [Oryza brachyantha]
Length = 318
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = +2
Query: 236 ESRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQEEETVRLLPDCFHVFHV 406
E RGL ++ I+ +P FRYRK A +CAVC+ EFQEEE VRLLP C HVFHV
Sbjct: 112 EPRGLEEAAIQSLPAFRYRKALKKDTADSSECAVCISEFQEEERVRLLPSCLHVFHV 168
>ref|XP_004247719.1| PREDICTED: RING-H2 finger protein ATL1-like [Solanum lycopersicum]
Length = 349
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = +2
Query: 200 RRLHDDLMMF--AVESRGLGQSEIRQIPTFRYRKETDASAAGGDDCAVCLGEFQEEETVR 373
RR+ D LM++ AVE+RGL +S IR IP F+Y+K + S + C VCL EFQE E +R
Sbjct: 84 RRVEDPLMIYSPAVENRGLDESVIRSIPVFKYKKREENSRIHSE-CVVCLNEFQENEKLR 142
Query: 374 LLPDCFHVFHV 406
++P+C H+FH+
Sbjct: 143 VIPNCAHIFHI 153
>gb|EMS49014.1| RING-H2 finger protein ATL1 [Triticum urartu]
Length = 462
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/55 (63%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +2
Query: 245 GLGQSEIRQIPTFRYRKETDASAAGGD--DCAVCLGEFQEEETVRLLPDCFHVFH 403
GLG+ IR +P FRY K A GGD +CAVCLGEFQE E VRLLP C HVFH
Sbjct: 317 GLGEPAIRALPAFRYSKAAKDDATGGDASECAVCLGEFQEGERVRLLPGCLHVFH 371
>ref|XP_002314635.2| zinc finger family protein [Populus trichocarpa]
gi|550329366|gb|EEF00806.2| zinc finger family protein
[Populus trichocarpa]
Length = 355
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Frame = +2
Query: 194 SQRRLHDDLMMF----AVESRGLGQSEIRQIPTFRYRKETDASAAGGD----DCAVCLGE 349
S+ R H+D +M A+ESRGL +S IR IP F+++KE + G+ +CAVCL E
Sbjct: 80 SRNRNHEDPLMAYSPSAIESRGLDESVIRSIPVFKFKKEGNNVRNVGERSFCECAVCLNE 139
Query: 350 FQEEETVRLLPDCFHVFHV 406
FQE E +R +P+C HVFH+
Sbjct: 140 FQEAEKLRRIPNCSHVFHI 158
>dbj|BAJ96458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 307
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Frame = +2
Query: 245 GLGQSEIRQIPTFRYRK--ETDASAAG-GDDCAVCLGEFQEEETVRLLPDCFHVFH 403
GLG+ IR +P FRY K + DA+AAG +CAVCLGEFQE E VRLLP C HVFH
Sbjct: 159 GLGEPAIRALPAFRYSKAAKDDAAAAGDASECAVCLGEFQEGERVRLLPGCLHVFH 214
>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein,
putative [Ricinus communis]
Length = 376
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = +2
Query: 200 RRLHDDLMMF--AVESRGLGQSEIRQIPTFRYRKETDASAAGG----DDCAVCLGEFQEE 361
R D LM + A+E+RGL +S IR IP F+++KE + S G +CAVCL EFQE
Sbjct: 84 RNQEDPLMGYSPAMENRGLDESVIRSIPIFKFKKEGNGSGDIGGRTLSECAVCLNEFQEN 143
Query: 362 ETVRLLPDCFHVFHV 406
E +R++P+C HVFH+
Sbjct: 144 EKLRIIPNCSHVFHI 158
>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
Length = 419
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 ALDRSQRRLHDDLMMF--AVESRGLGQSEIRQIPTFRYRKE--TDASAAGGDDCAVCLGE 349
+ RS+ R D LM++ A+ESRGL +S IR IP F++RK + +CAVCL E
Sbjct: 146 SFSRSRHR-EDPLMVYSPAIESRGLDESVIRSIPIFQFRKGGGREFGERSHCECAVCLNE 204
Query: 350 FQEEETVRLLPDCFHVFHV 406
FQEEE +R++P+C H+FH+
Sbjct: 205 FQEEEKLRIIPNCSHIFHI 223
>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Frame = +2
Query: 200 RRLHDDLMMF--AVESRGLGQSEIRQIPTFRYRKE--TDASAAGGDDCAVCLGEFQEEET 367
R D LM++ A+ESRGL +S IR IP F++RK + +CAVCL EFQEEE
Sbjct: 91 RHPEDPLMVYSPAIESRGLDESVIRSIPIFQFRKGGGREFGERSHCECAVCLNEFQEEEK 150
Query: 368 VRLLPDCFHVFHV 406
+R++P+C H+FH+
Sbjct: 151 LRIIPNCSHIFHI 163
>ref|XP_006379892.1| hypothetical protein POPTR_0008s16580g, partial [Populus
trichocarpa] gi|550333231|gb|ERP57689.1| hypothetical
protein POPTR_0008s16580g, partial [Populus trichocarpa]
Length = 293
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
Frame = +2
Query: 185 LDRSQRRLHDDLMMF----AVESRGLGQSEIRQIPTFRYRKETDASAAGGD----DCAVC 340
L S+ H+D +M A+ SRGL +S IR IP F+++KE ++ + G+ +CAVC
Sbjct: 43 LSLSRNGNHEDPLMAYSPAAIVSRGLDESVIRSIPVFKFKKEGNSFSNLGERNFCECAVC 102
Query: 341 LGEFQEEETVRLLPDCFHVFHV 406
L EFQE E +R LP+C HVFH+
Sbjct: 103 LNEFQEAERLRNLPNCNHVFHI 124
>gb|EOY06016.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 354
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = +2
Query: 200 RRLHDDLMMF---AVESRGLGQSEIRQIPTFRYRKETDASAAGGD---DCAVCLGEFQEE 361
RR H+D +M A+E RGL +S IR IP F+++K + G +CAVCL EFQE+
Sbjct: 84 RRQHEDPLMAYSPAMEHRGLDESVIRSIPIFQFKKGGNNRYFGERSFCECAVCLNEFQED 143
Query: 362 ETVRLLPDCFHVFHV 406
E +R++P+C HVFH+
Sbjct: 144 EKLRIIPNCSHVFHI 158
>ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp.
lyrata] gi|297311259|gb|EFH41683.1| hypothetical protein
ARALYDRAFT_494656 [Arabidopsis lyrata subsp. lyrata]
Length = 379
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Frame = +2
Query: 182 ALDRSQRRLHDDLMMFAVE--SRGLGQSEIRQIPTFRYRKETDASAA----------GGD 325
+L R +R D LM+++ E +RGL +S IR IP F+++K D +
Sbjct: 75 SLSRRRRNDQDPLMVYSPELRNRGLDESVIRAIPIFKFKKRNDQNDGVFTGEGEEEKSSQ 134
Query: 326 DCAVCLGEFQEEETVRLLPDCFHVFHV 406
+C+VCL EFQ+EE +R++P+C H+FH+
Sbjct: 135 ECSVCLSEFQDEEKLRIIPNCCHLFHI 161
>ref|XP_004954415.1| PREDICTED: RING-H2 finger protein ATL16-like [Setaria italica]
Length = 336
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = +2
Query: 236 ESRGLGQSEIRQIPTFRYRKETDASAAGGD------DCAVCLGEFQEEETVRLLPDCFHV 397
E+RGL ++ I+ +P FRYRK ++A D +C VCLGEF++EE VR+LP C HV
Sbjct: 121 EARGLEEAIIQALPAFRYRKAFKNASATADSGAPTSECVVCLGEFEDEERVRMLPACLHV 180
Query: 398 FHV 406
FHV
Sbjct: 181 FHV 183
>ref|NP_199155.1| RING-H2 finger protein [Arabidopsis thaliana]
gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName:
Full=RING-H2 finger protein ATL16
gi|8843895|dbj|BAA97421.1| unnamed protein product
[Arabidopsis thaliana] gi|30725342|gb|AAP37693.1|
At5g43420 [Arabidopsis thaliana]
gi|110736470|dbj|BAF00203.1| hypothetical protein
[Arabidopsis thaliana] gi|332007576|gb|AED94959.1|
RING-H2 finger protein [Arabidopsis thaliana]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 14/89 (15%)
Frame = +2
Query: 182 ALDRSQRRLHDDLMMFAVE--SRGLGQSEIRQIPTFRYRKETDASAA------------G 319
+L R +R D LM+++ E SRGL +S IR IP F+++K D +
Sbjct: 75 SLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKR 134
Query: 320 GDDCAVCLGEFQEEETVRLLPDCFHVFHV 406
+C+VCL EFQ+EE +R++P+C H+FH+
Sbjct: 135 SQECSVCLSEFQDEEKLRIIPNCSHLFHI 163
>gb|EXB54029.1| RING-H2 finger protein ATL16 [Morus notabilis]
Length = 363
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Frame = +2
Query: 185 LDRSQRRLHDDLMM-FAVESRGLGQSEIRQIPTFRYRKET-DASAAGGDD------CAVC 340
L RS R H+DL+M ++ GL +S IR IP ++K + A DD CAVC
Sbjct: 86 LSRSANRAHEDLLMGYSPRGGGLDESVIRSIPILHFKKNRLGQTIASFDDNIKFSECAVC 145
Query: 341 LGEFQEEETVRLLPDCFHVFHV 406
L EF+++E +R++P+C H+FH+
Sbjct: 146 LNEFEDDEKLRIIPNCLHIFHI 167
>gb|EMS65743.1| RING-H2 finger protein ATL16 [Triticum urartu]
Length = 301
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +2
Query: 239 SRGLGQSEIRQIPTFRYRKETDASAA---GGDDCAVCLGEFQEEETVRLLPDCFHVFHV 406
SRGL ++ IR+IPT RYR+ A +CAVCL EFQE E +RLLP C H+FH+
Sbjct: 71 SRGLEEAAIRRIPTLRYRESKQPQAPQAQAASECAVCLSEFQEGERLRLLPPCLHLFHI 129
>gb|EMJ25475.1| hypothetical protein PRUPE_ppa019060mg [Prunus persica]
Length = 362
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = +2
Query: 200 RRLHDDLMMFA--VESRGLGQSEIRQIPTFRYRKETDASAAGGD--DCAVCLGEFQEEET 367
RR + LM ++ +E+RGL ++ IR IP +++K+ + G +CAVCL EFQE+E
Sbjct: 84 RRDEEQLMAYSPGLETRGLDEAVIRSIPLLQFKKDRNRGFEEGSFCECAVCLNEFQEDEK 143
Query: 368 VRLLPDCFHVFHV 406
+R++P+C H+FH+
Sbjct: 144 LRIIPNCSHIFHI 156