BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038028
         (843 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containi...   297   3e-78
emb|CAN68263.1| hypothetical protein VITISV_010806 [Vitis vinifera]   295   1e-77
emb|CBI35273.3| unnamed protein product [Vitis vinifera]              246   1e-62
emb|CBI38358.3| unnamed protein product [Vitis vinifera]              219   1e-54
emb|CBI16398.3| unnamed protein product [Vitis vinifera]              218   3e-54
dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]    216   6e-54
gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus pe...   215   1e-53
ref|XP_006648851.1| PREDICTED: pentatricopeptide repeat-containi...   212   1e-52
ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containi...   212   1e-52
ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group] g...   212   1e-52
ref|XP_004953150.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-52
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   211   2e-52
gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indi...   211   2e-52
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              211   3e-52
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   211   3e-52
gb|EMT22934.1| hypothetical protein F775_14642 [Aegilops tauschii]    211   3e-52
gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily pr...   210   6e-52
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_002533114.1| pentatricopeptide repeat-containing protein,...   207   3e-51

>ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 550

 Score =  297 bits (761), Expect = 3e-78
 Identities = 151/282 (53%), Positives = 200/282 (70%), Gaps = 2/282 (0%)
 Frame = -2

Query: 842 FTVARLLASCAV-PSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM 666
           FTV RLLA  A+ PS+ DL HA+ +F     P+PFM+NT+  A SR+   ++S+  Y  M
Sbjct: 44  FTVTRLLACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMASSRT---LDSVTFYVCM 100

Query: 665 LRSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDM 486
           L +G +PD  TFPFLI+S S   +  LG  +H H VK GLD DVFVVNN I +YS + ++
Sbjct: 101 LHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFREL 160

Query: 485 VSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
            SARK+FDE+  + DVVS T L+TG+SN  Q+D AR +FD MP +N +SWNAM++GYA  
Sbjct: 161 RSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGS 220

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRN-VTPNESALVSA 129
               EA +LFD+MPDR+ ASWS+++SG++Q G C EAL +F EMV  + + PNE+ALVSA
Sbjct: 221 SRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSA 280

Query: 128 VSACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           VSACAQLR L +G WLH YI E  + +++ LGT L+DMYGKC
Sbjct: 281 VSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKC 322


>emb|CAN68263.1| hypothetical protein VITISV_010806 [Vitis vinifera]
          Length = 445

 Score =  295 bits (755), Expect = 1e-77
 Identities = 150/282 (53%), Positives = 199/282 (70%), Gaps = 2/282 (0%)
 Frame = -2

Query: 842 FTVARLLASCAV-PSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM 666
           FTV RLLA  A+ PS+ DL HA+ +F     P+PFM+NT+  A SR+   ++S+  Y  M
Sbjct: 46  FTVTRLLACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMASSRT---LDSVTFYVCM 102

Query: 665 LRSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDM 486
           L +G +PD  TFPFLI+S S   +  LG  +H H VK GLD DVFVVNN I +YS + ++
Sbjct: 103 LHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFREL 162

Query: 485 VSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
            SARK+FDE+  + DVVS T L+TG+SN  Q+D AR +FD MP +N +SWNAM++GYA  
Sbjct: 163 RSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGS 222

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRN-VTPNESALVSA 129
               EA +LFD+MPDR+ ASWS+++SG++Q G C EAL +F EMV  + + PNE+ALVSA
Sbjct: 223 SRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSA 282

Query: 128 VSACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           VSACAQL  L +G WLH YI E  + +++ LGT L+DMYGKC
Sbjct: 283 VSACAQLXALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKC 324


>emb|CBI35273.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  246 bits (627), Expect = 1e-62
 Identities = 126/246 (51%), Positives = 171/246 (69%), Gaps = 1/246 (0%)
 Frame = -2

Query: 740 MYNTMFRALSRSPRPVESIHLYSRMLRSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHA 561
           M+NT+  A SR+   ++S+  Y  ML +G +PD  TFPFLI+S S   +  LG  +H H 
Sbjct: 1   MFNTIIMASSRT---LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHV 57

Query: 560 VKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCA 381
           VK GLD DVFVVNN I +YS + ++ SARK+FDE+  + DVVS T L+TG+SN  Q+D A
Sbjct: 58  VKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEA 117

Query: 380 RWLFDQMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCK 201
           R +FD MP +N +SWNAM++GYA      EA +LFD+MPDR+ ASWS+++SG++Q G C 
Sbjct: 118 RKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCN 177

Query: 200 EALTVFREMVVRN-VTPNESALVSAVSACAQLRDLNQGEWLHKYIMEHMVEMSIILGTAL 24
           EAL +F EMV  + + PNE+ALVSAVSACAQLR L +G WLH YI E  + +++ L    
Sbjct: 178 EALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLAGLA 237

Query: 23  VDMYGK 6
           ++  GK
Sbjct: 238 LNGCGK 243


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  219 bits (558), Expect = 1e-54
 Identities = 110/281 (39%), Positives = 177/281 (62%), Gaps = 2/281 (0%)
 Frame = -2

Query: 839 TVARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLR 660
           T+ +L++ CAV  +GDL +A+ +F  I +P  FMYN++ R  S S  P++++ L+ RM+ 
Sbjct: 22  TLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMIC 81

Query: 659 SGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVS 480
           SG+ P+  T PF++++C    +      VH  A+K G+ S VFV N  I +Y   G +  
Sbjct: 82  SGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHC 141

Query: 479 ARKLFDENVD--VADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
           ARKLFD+  D  + D++ R ALV  Y+ C  L  A+ +FD+  E+N +SW +M++ YA+ 
Sbjct: 142 ARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQH 201

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAV 126
           G+   A Q+FD+MP +N+ SW+S+IS + + G+ +EAL +F +M    V P+E+ LVS +
Sbjct: 202 GSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSIL 261

Query: 125 SACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           +AC+QL DL  G+ +H YI+ +     + L  +L+DMY KC
Sbjct: 262 AACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKC 302



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
 Frame = -2

Query: 524 NNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLD-------CARWLFD 366
           N+ I+ Y   G    A  LF++  +   V     LV+  + C QL           ++  
Sbjct: 223 NSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILS 282

Query: 365 QMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTV 186
                    +N+++  YAK G  + AL +F +MP +NL SW+ II   A  G   EA+ +
Sbjct: 283 NKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKL 342

Query: 185 FREMVVRNVTPNESALVSAVSACAQLRDLNQG-EWLHKYIMEHMVEMSIILGTALVDMYG 9
           F EM      P+E  L   +SAC+    ++ G  +  +  + + V   I     +VD+ G
Sbjct: 343 FEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLG 402

Query: 8   K 6
           +
Sbjct: 403 R 403


>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  218 bits (554), Expect = 3e-54
 Identities = 111/281 (39%), Positives = 167/281 (59%), Gaps = 1/281 (0%)
 Frame = -2

Query: 842 FTVARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRML 663
           F  +RL+A CA+    DL +   +  +   P  F +N   R    S  P E++ LY R+L
Sbjct: 83  FASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVL 142

Query: 662 R-SGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDM 486
           +  G  PD  T+P L ++C+ L    +G  +  H +  G DSD+FV N  I +    GD+
Sbjct: 143 QCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDL 202

Query: 485 VSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
             ARK+FD++  V D+VS  +++ GY  C  L+ AR LFD M  +  +SW  MV GYA+ 
Sbjct: 203 DGARKMFDKSC-VRDLVSWNSMINGY--CGNLESARKLFDSMTNKTMVSWTTMVVGYAQS 259

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAV 126
           G    A +LFD+MPD+++  W+++I G+  + R KEAL +F EM   N+ P+E  +VS +
Sbjct: 260 GLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 319

Query: 125 SACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           SAC+QL  L+ G W+H YI +H + +++ LGTAL+DMY KC
Sbjct: 320 SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKC 360


>dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 491

 Score =  216 bits (551), Expect = 6e-54
 Identities = 122/275 (44%), Positives = 164/275 (59%), Gaps = 1/275 (0%)
 Frame = -2

Query: 824 LASCAVPSSGDLHHARA-LFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIW 648
           +A+ A      LH A A L  S    +    N++ RA   +  P     L   +L   + 
Sbjct: 13  VAANAAARPAILHRAHAALITSGHLSSCASVNSLLRA---ARIPAAYALLLRFLLLHRLP 69

Query: 647 PDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKL 468
           PD L+  F + SC+   S  +   +H  AV+ G   DV+V++ A++ Y    D+ SA +L
Sbjct: 70  PDHLSLSFSLHSCTRSPSLPVASLLHSFAVRLGHARDVYVLSAAVSAYFRATDVASAERL 129

Query: 467 FDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTMEA 288
           F    DVADVV+ T +VTG++N   L+ ARW FD MPERN +SWNAM+  YA  G   +A
Sbjct: 130 FSYTKDVADVVTWTTMVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYASAGMLSKA 189

Query: 287 LQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQL 108
            +LFD MP RN ASWSS+++G  +S RC+EAL VF EM+   V PNESALVSAVSAC+ L
Sbjct: 190 RKLFDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVSACSLL 249

Query: 107 RDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           R L  G W+H Y    +  MS++L TA+VDMYGKC
Sbjct: 250 RSLEHGVWVHAYAKRELQGMSLVLATAIVDMYGKC 284



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
 Frame = -2

Query: 503 SDWGDMVS----------ARKLFDENVDVADVVSRTALVTGYSNC---RQLDCARWLFD- 366
           + W  MV+          A ++F E + +  V + +ALV+  S C   R L+   W+   
Sbjct: 202 ASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVSACSLLRSLEHGVWVHAY 261

Query: 365 ---QMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEA 195
              ++   + +   A+V  Y K G    A+++F  MP +N+ SW+S+I+G A +GR  +A
Sbjct: 262 AKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQA 321

Query: 194 LTVFREMVVRNVTPNESALVSAVSACAQLRDLNQGEWLHKY---------IMEHMVEMSI 42
           L++F +M +  V PN+   +  + AC+    +++G WL            + EH   M  
Sbjct: 322 LSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYGLMVD 381

Query: 41  ILGTA 27
           +LG A
Sbjct: 382 LLGRA 386


>gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus persica]
          Length = 539

 Score =  215 bits (548), Expect = 1e-53
 Identities = 109/279 (39%), Positives = 174/279 (62%), Gaps = 1/279 (0%)
 Frame = -2

Query: 836 VARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRS 657
           + +L+ + A+  SG + +A  LF  +  P  FM+NTM R  ++S  P+ +I LY+RM   
Sbjct: 48  IRQLIFAGAMAISGTIDYAHQLFVHVAEPDTFMWNTMIRGSAQSQNPLNAIVLYTRMENR 107

Query: 656 GIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSA 477
              PD  TFPF++++C+ L    +G G+H   V+ G +S+ FV N  I  +++ GD+  A
Sbjct: 108 HAMPDSFTFPFILKACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANCGDLKIA 167

Query: 476 RKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNT 297
            +LFD +    DVV  +AL  GY+   +LD AR LFD+MP ++ +SWN M+ GY K+G  
Sbjct: 168 SELFDASAK-RDVVPWSALTAGYARRGKLDEARQLFDEMPVKDLVSWNVMITGYGKQGEM 226

Query: 296 MEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSAC 117
             A +LFDK+P+R++ +W+++I+G+   G  ++AL +F EM      P+E  ++S +SAC
Sbjct: 227 ESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMRSLGEKPDEVTMLSLLSAC 286

Query: 116 AQLRDLNQGEWLHKYIME-HMVEMSIILGTALVDMYGKC 3
             + DL+ G+ +H  ++E    +MSIILG AL+DMY KC
Sbjct: 287 TDIGDLDVGQKIHSALLEMGRGDMSIILGNALIDMYSKC 325



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
 Frame = -2

Query: 539 DVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQM 360
           D+   N  IT Y   G+M SARKLFD+ V   DVV+  A++ GY  C   + A  +F++M
Sbjct: 209 DLVSWNVMITGYGKQGEMESARKLFDK-VPERDVVTWNAMIAGYVLCGSNEQALQMFEEM 267

Query: 359 P----------------------------------------ERNPISWNAMVAGYAKEGN 300
                                                    + + I  NA++  Y+K G+
Sbjct: 268 RSLGEKPDEVTMLSLLSACTDIGDLDVGQKIHSALLEMGRGDMSIILGNALIDMYSKCGS 327

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
              A+++F KM D++++SW+S+I G A  G  +E++ +F EM    + PNE   V  + A
Sbjct: 328 IERAVEVFQKMRDKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKIRPNEITFVGVLVA 387

Query: 119 CAQLRDLNQG-EWLHKYIMEHMVEMSIILGTALVDMYGK 6
           C+    + +G  + +    ++ +E +I     +VDM G+
Sbjct: 388 CSHAGKVEEGRRYFNLMKHKYKIEPNIKHYGCMVDMLGR 426


>ref|XP_006648851.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Oryza brachyantha]
          Length = 497

 Score =  212 bits (540), Expect = 1e-52
 Identities = 121/277 (43%), Positives = 167/277 (60%), Gaps = 2/277 (0%)
 Frame = -2

Query: 827 LLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIW 648
           L A  A P+     HA  L  S    + +  N + R+ S    P     L   +L   + 
Sbjct: 17  LAAVAAKPAIFRRAHA-VLLTSGHLSSRYSVNCLLRSAST---PSSCALLLRILLNHRLL 72

Query: 647 PDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKL 468
           PD L+  F +  CS L S  +   VH  A + G   DV+VVN A++ Y    D+ SA +L
Sbjct: 73  PDHLSLSFSLHPCSRLPSHPVASVVHSLAARLGHARDVYVVNAAVSAYFAADDVASAERL 132

Query: 467 FDE-NVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTME 291
           F E + DVADVV+ TA+VTG++N   ++ A+W F+ MPE+N +SWNAM+  YA+ G   +
Sbjct: 133 FSETSKDVADVVTWTAMVTGHANASDVERAKWFFEAMPEKNVVSWNAMLGAYARAGLLPK 192

Query: 290 ALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQ 111
           A +LFD+MP RN A+WSS+I+G  QS + +EAL VF +MV   V PNE ALVSAVSACAQ
Sbjct: 193 ARKLFDRMPSRNAATWSSMITGLVQSDQYEEALRVFSDMVASGVVPNEPALVSAVSACAQ 252

Query: 110 LRDLNQGEWLHKYIMEHM-VEMSIILGTALVDMYGKC 3
           LR +  G W+H+Y    +   MS++L TA++DMYGKC
Sbjct: 253 LRWIEHGAWVHEYAERELNGAMSVVLATAIIDMYGKC 289



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
 Frame = -2

Query: 479 ARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWL-----FDQMPER------NPISWN 333
           A ++F + V    V +  ALV+  S C QL   RW+       +  ER      + +   
Sbjct: 224 ALRVFSDMVASGVVPNEPALVSAVSACAQL---RWIEHGAWVHEYAERELNGAMSVVLAT 280

Query: 332 AMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTP 153
           A++  Y K G+  +A+++F  MP RN+ SW+S+I+G A +G  ++AL++F +M +  V P
Sbjct: 281 AIIDMYGKCGSIRDAVRVFAAMPVRNIYSWNSMITGLAMNGSERQALSLFWKMQLAGVRP 340

Query: 152 NESALVSAVSACAQLRDLNQGEWLHKYIMEH 60
           N+   +  +SAC+    +++G WL   ++ H
Sbjct: 341 NDITFIGLLSACSHSGLVDEGRWLFDKMVNH 371


>ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Brachypodium distachyon]
          Length = 497

 Score =  212 bits (540), Expect = 1e-52
 Identities = 107/217 (49%), Positives = 141/217 (64%), Gaps = 2/217 (0%)
 Frame = -2

Query: 647 PDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKL 468
           PD L+  F + SC+ L    +   +H  AV+ G   DV++VN A++ Y    D+ SA +L
Sbjct: 74  PDHLSISFSLHSCTRLPCHPIASLLHSFAVRLGHAGDVYIVNAAVSAYFTAADVASAERL 133

Query: 467 F-DENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTME 291
           F D + DVADVV+ T +V G++    ++ ARW FD MPERN +SWNAM+  YA  G   E
Sbjct: 134 FSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPERNVVSWNAMLGAYASAGMLSE 193

Query: 290 ALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQ 111
           A +LFD M  RN A+WSS+++G  QS  C+EAL VF +MV R V PNES LVS +SACAQ
Sbjct: 194 ARKLFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSDMVARGVVPNESILVSVISACAQ 253

Query: 110 LRDLNQGEWLHKYIMEHM-VEMSIILGTALVDMYGKC 3
           LR L  G W+H Y+   +   MS+IL TA+VDMYGKC
Sbjct: 254 LRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKC 290



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
 Frame = -2

Query: 800 SGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM--LRSGIWPDRLTFP 627
           +GD+  AR  F ++       +N M  A + +    E+  L+  M    +  W   +T  
Sbjct: 157 AGDVERARWFFDAMPERNVVSWNAMLGAYASAGMLSEARKLFDGMHSRNAATWSSMVT-- 214

Query: 626 FLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVDV 447
                       GL Q  HC                A+ ++SD   MV+   + +E++ V
Sbjct: 215 ------------GLVQSDHCE--------------EALRVFSD---MVARGVVPNESILV 245

Query: 446 ADVVSRTALVTGYSNCRQLDCARWLFDQMPER-----NPISWNAMVAGYAKEGNTMEALQ 282
           +       +++  +  R L+   W+   +        + I   A+V  Y K G    A++
Sbjct: 246 S-------VISACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIR 298

Query: 281 LFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQLRD 102
           +F  MP RN+ SW+S+I+G A +GR  +AL++F +M +  V PN+   +  + AC+    
Sbjct: 299 VFAAMPVRNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGL 358

Query: 101 LNQGEWL 81
           +++G WL
Sbjct: 359 VDEGRWL 365


>ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
           gi|125582938|gb|EAZ23869.1| hypothetical protein
           OsJ_07586 [Oryza sativa Japonica Group]
           gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa
           Japonica Group]
          Length = 493

 Score =  212 bits (540), Expect = 1e-52
 Identities = 124/280 (44%), Positives = 161/280 (57%), Gaps = 6/280 (2%)
 Frame = -2

Query: 824 LASC---AVPSSGDLHHARA-LFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRS 657
           LASC         D   A A L  S    + +  N + RA S    P  S  L   +L  
Sbjct: 9   LASCLAAVATKPADFRRAHAILLTSGHLSSRYSVNCLIRAASA---PSASALLLRFLLNH 65

Query: 656 GIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSA 477
            + PD L+  F +  CS L S  +   VH  AV+ G   DV+VVN A + Y    D+ SA
Sbjct: 66  RLLPDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASA 125

Query: 476 RKLFDE-NVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGN 300
            +LF E + DVADVV+ T +VTG++N   ++ ARW FD MPE+N +SWN M+  YA+ G 
Sbjct: 126 ERLFSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGM 185

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
             +A +LFD+MP RN A+W S+I+G  QS  C+EAL VF +MV   V PNE ALVS VSA
Sbjct: 186 LPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASGVVPNEPALVSTVSA 245

Query: 119 CAQLRDLNQGEWLHKYIMEHM-VEMSIILGTALVDMYGKC 3
           C QLR +  G W+H Y    +   MS +L TA+VDMYGKC
Sbjct: 246 CTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKC 285



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
 Frame = -2

Query: 803 SSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM--LRSGIWPDRLTF 630
           ++GD+  AR  F ++       +NTM  A +R+    ++  L+ RM    +  W   +T 
Sbjct: 151 NAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPKARKLFDRMPSRNAATWGSMIT- 209

Query: 629 PFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVD 450
                        GL Q  HC                             A ++F + V 
Sbjct: 210 -------------GLLQSDHCE---------------------------EALRVFSDMVA 229

Query: 449 VADVVSRTALVTGYSNCRQLDCARWL-----FDQMPER------NPISWNAMVAGYAKEG 303
              V +  ALV+  S C QL   RW+          ER      + +   A+V  Y K G
Sbjct: 230 SGVVPNEPALVSTVSACTQL---RWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCG 286

Query: 302 NTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVS 123
           +  +A+++F  MP RN+ SW+S+I+G A +G  ++AL++F +M +  V PN+   +  +S
Sbjct: 287 SIRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLS 346

Query: 122 ACAQLRDLNQGEWLHKYIMEH 60
           AC+    +++G WL   ++ H
Sbjct: 347 ACSHSGLVDEGRWLFYKMVNH 367


>ref|XP_004953150.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Setaria italica]
          Length = 494

 Score =  212 bits (539), Expect = 2e-52
 Identities = 125/282 (44%), Positives = 166/282 (58%), Gaps = 4/282 (1%)
 Frame = -2

Query: 836 VARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRS 657
           +A + A+ A P+S    H   L  S    +    N++ RA   +P P     L   +   
Sbjct: 14  LAAVAAAAAKPASFPSAHV-VLLTSGHLSSRASVNSLLRA---APFPSACALLLRLLHLH 69

Query: 656 GIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSA 477
            + PD ++  F + SC+ + S  L   VH  AV+ G   DV+VVN A++ Y    D+ SA
Sbjct: 70  RLLPDHISLSFSLHSCTRVPSHQLTSLVHSLAVRLGHCRDVYVVNAAVSSYFTASDVASA 129

Query: 476 RKLFDE---NVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
            +LF E   + DV DVV+ T +VTG++N   L  ARW F+ MPERN +SWNAM+  YA+ 
Sbjct: 130 DRLFAEISRSKDVTDVVTWTTMVTGHANAGNLRRARWFFEAMPERNVVSWNAMLGAYARA 189

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAV 126
           G   EA +LFD MPDRN A+WSS+I+G   SG C+EAL VF ++V   V PNE+ALVSAV
Sbjct: 190 GRLSEARKLFDAMPDRNAATWSSMINGLVHSGHCEEALRVFGDIVGSCVVPNEAALVSAV 249

Query: 125 SACAQLRDLNQGEWLHKYIMEHM-VEMSIILGTALVDMYGKC 3
           SAC QLR    G W+H Y    +   MSI L TA+VDMYGKC
Sbjct: 250 SACTQLRSAEHGAWVHAYAERKLHGAMSITLATAIVDMYGKC 291



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
 Frame = -2

Query: 803 SSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIWPDR--LTF 630
           ++G+L  AR  F ++       +N M  A +R+ R  E+  L+  M      PDR   T+
Sbjct: 157 NAGNLRRARWFFEAMPERNVVSWNAMLGAYARAGRLSEARKLFDAM------PDRNAATW 210

Query: 629 PFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVD 450
             +I         GL    HC                             A ++F + V 
Sbjct: 211 SSMIN--------GLVHSGHCE---------------------------EALRVFGDIVG 235

Query: 449 VADVVSRTALVTGYSNCRQLDCAR---WLFDQMPERNPISWN-----AMVAGYAKEGNTM 294
              V +  ALV+  S C QL  A    W+      +   + +     A+V  Y K G+  
Sbjct: 236 SCVVPNEAALVSAVSACTQLRSAEHGAWVHAYAERKLHGAMSITLATAIVDMYGKCGSIH 295

Query: 293 EALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACA 114
            A+++F  MP RN+ SW+S+I+G A +G  ++AL++  +M +  + PN+   +  +SAC+
Sbjct: 296 NAVRVFAAMPVRNIYSWNSMIAGLAMNGGERQALSLLWKMQMAGIRPNDITFIGLLSACS 355

Query: 113 QLRDLNQGEWLHKYIMEHMVE 51
               +++G    + + + MVE
Sbjct: 356 HSGLVSEG----RRVFDSMVE 372


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  211 bits (538), Expect = 2e-52
 Identities = 109/294 (37%), Positives = 175/294 (59%), Gaps = 15/294 (5%)
 Frame = -2

Query: 839  TVARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLR 660
            T+ +L++ CAV  +GDL +A+ +F  I +P  FMYN++ R  S S  P++++ L+ RM+ 
Sbjct: 148  TLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMIC 207

Query: 659  SGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVS 480
            SG+ P+  T PF++++C    +      VH  A+K G+ S VFV N  I +Y   G +  
Sbjct: 208  SGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHC 267

Query: 479  ARKLFDENVDVA---------------DVVSRTALVTGYSNCRQLDCARWLFDQMPERNP 345
            ARKLFD+  D                 D++ R AL   Y+ C  L  A+ +FD+  E+N 
Sbjct: 268  ARKLFDDITDKTLVSWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNV 327

Query: 344  ISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVR 165
            +SW +M++ YA+ G+   A Q+FD+MP +N+ SW+S+IS + + G+ +EAL +F +M   
Sbjct: 328  VSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNS 387

Query: 164  NVTPNESALVSAVSACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
             V P+E+ LVS ++AC+QL DL  G+ +H YI+ +     + L  +L+DMY KC
Sbjct: 388  RVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKC 441



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
 Frame = -2

Query: 524 NNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLD-------CARWLFD 366
           N+ I+ Y   G    A  LF++  +   V     LV+  + C QL           ++  
Sbjct: 362 NSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILS 421

Query: 365 QMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTV 186
                    +N+++  YAK G  + AL +F +MP +NL SW+ II   A  G   EA+ +
Sbjct: 422 NKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKL 481

Query: 185 FREMVVRNVTPNESALVSAVSACAQLRDLNQG-EWLHKYIMEHMVEMSIILGTALVDMYG 9
           F EM      P+E  L   +SAC+    ++ G  +  +  + + V   I     +VD+ G
Sbjct: 482 FEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLG 541

Query: 8   K 6
           +
Sbjct: 542 R 542


>gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
          Length = 493

 Score =  211 bits (538), Expect = 2e-52
 Identities = 124/280 (44%), Positives = 161/280 (57%), Gaps = 6/280 (2%)
 Frame = -2

Query: 824 LASC---AVPSSGDLHHARA-LFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRS 657
           LASC         D   A A L  S    + +  N + RA S    P  S  L   +L  
Sbjct: 9   LASCLAAVAAKPADFRRAHAILLTSGHLSSRYSVNCLIRAASA---PSASALLLRFLLNH 65

Query: 656 GIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSA 477
            + PD L+  F +  CS L S  +   VH  AV+ G   DV+VVN A + Y    D+ SA
Sbjct: 66  RLLPDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASA 125

Query: 476 RKLFDE-NVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGN 300
            +LF E + DVADVV+ T +VTG++N   ++ ARW FD MPE+N +SWN M+  YA+ G 
Sbjct: 126 ERLFSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGM 185

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
             +A +LFD+MP RN A+W S+I+G  QS  C+EAL VF +MV   V PNE ALVS VSA
Sbjct: 186 LPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVACGVVPNEPALVSTVSA 245

Query: 119 CAQLRDLNQGEWLHKYIMEHM-VEMSIILGTALVDMYGKC 3
           C QLR +  G W+H Y    +   MS +L TA+VDMYGKC
Sbjct: 246 CTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKC 285



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
 Frame = -2

Query: 803 SSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM--LRSGIWPDRLTF 630
           ++GD+  AR  F ++       +NTM  A +R+    ++  L+ RM    +  W   +T 
Sbjct: 151 NAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPKARKLFDRMPSRNAATWGSMIT- 209

Query: 629 PFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVD 450
                        GL Q  HC                             A ++F + V 
Sbjct: 210 -------------GLLQSDHCE---------------------------EALRVFSDMVA 229

Query: 449 VADVVSRTALVTGYSNCRQLDCARWL-----FDQMPER------NPISWNAMVAGYAKEG 303
              V +  ALV+  S C QL   RW+          ER      + +   A+V  Y K G
Sbjct: 230 CGVVPNEPALVSTVSACTQL---RWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCG 286

Query: 302 NTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVS 123
           +  +A+++F  MP RN+ SW+S+I+G A +G  ++AL++F +M +  V PN+   +  +S
Sbjct: 287 SIRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLS 346

Query: 122 ACAQLRDLNQGEWLHKYIMEH 60
           AC+    +++G WL   ++ H
Sbjct: 347 ACSHSGLVDEGRWLFYKMVNH 367


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  211 bits (537), Expect = 3e-52
 Identities = 109/276 (39%), Positives = 172/276 (62%), Gaps = 1/276 (0%)
 Frame = -2

Query: 827 LLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIW 648
           L+ + ++  SG + +A  LF  I  P  FM+NTM R  ++SP P+ +I LYS+M    + 
Sbjct: 16  LIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVR 75

Query: 647 PDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKL 468
           PD+ TFPF++++C+ L    +G GVH    + G +S+ FV N  I  +++ GD+  AR L
Sbjct: 76  PDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARAL 135

Query: 467 FDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTMEA 288
           FD +    DVV+ +AL  GY+   +L  AR LFD+MP ++ +SWN M+ GYAK G    A
Sbjct: 136 FDGSAK-RDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESA 194

Query: 287 LQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQL 108
            +LFD++P R++ +W+++I+G+   G  ++AL +F EM      P+E  ++S +SAC  L
Sbjct: 195 RKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDL 254

Query: 107 RDLNQGEWLHKYIME-HMVEMSIILGTALVDMYGKC 3
            DL+ G+ +H  I E    ++S++LG AL+DMY KC
Sbjct: 255 GDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKC 290



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
 Frame = -2

Query: 539 DVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQM 360
           D+   N  IT Y+  G+M SARKLFDE V   DVV+  A++ GY  C     A  +F++M
Sbjct: 174 DLVSWNVMITGYAKRGEMESARKLFDE-VPKRDVVTWNAMIAGYVLCGSNQQALEMFEEM 232

Query: 359 P----------------------------------------ERNPISWNAMVAGYAKEGN 300
                                                    + + +  NA++  YAK G+
Sbjct: 233 RSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGS 292

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
            + AL++F  M ++++++W+S++ G A  G  ++++ +F EM    + P+E   V  + A
Sbjct: 293 IVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVA 352

Query: 119 CAQLRDLNQG-EWLHKYIMEHMVEMSIILGTALVDMYGK 6
           C+    + +G ++      E+ +E +I     +VD+ G+
Sbjct: 353 CSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGR 391


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  211 bits (537), Expect = 3e-52
 Identities = 109/276 (39%), Positives = 172/276 (62%), Gaps = 1/276 (0%)
 Frame = -2

Query: 827 LLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIW 648
           L+ + ++  SG + +A  LF  I  P  FM+NTM R  ++SP P+ +I LYS+M    + 
Sbjct: 51  LIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVR 110

Query: 647 PDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKL 468
           PD+ TFPF++++C+ L    +G GVH    + G +S+ FV N  I  +++ GD+  AR L
Sbjct: 111 PDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARAL 170

Query: 467 FDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTMEA 288
           FD +    DVV+ +AL  GY+   +L  AR LFD+MP ++ +SWN M+ GYAK G    A
Sbjct: 171 FDGSAK-RDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESA 229

Query: 287 LQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQL 108
            +LFD++P R++ +W+++I+G+   G  ++AL +F EM      P+E  ++S +SAC  L
Sbjct: 230 RKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDL 289

Query: 107 RDLNQGEWLHKYIME-HMVEMSIILGTALVDMYGKC 3
            DL+ G+ +H  I E    ++S++LG AL+DMY KC
Sbjct: 290 GDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKC 325



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
 Frame = -2

Query: 539 DVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQM 360
           D+   N  IT Y+  G+M SARKLFDE V   DVV+  A++ GY  C     A  +F++M
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDE-VPKRDVVTWNAMIAGYVLCGSNQQALEMFEEM 267

Query: 359 P----------------------------------------ERNPISWNAMVAGYAKEGN 300
                                                    + + +  NA++  YAK G+
Sbjct: 268 RSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGS 327

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
            + AL++F  M ++++++W+S++ G A  G  ++++ +F EM    + P+E   V  + A
Sbjct: 328 IVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVA 387

Query: 119 CAQLRDLNQG-EWLHKYIMEHMVEMSIILGTALVDMYGK 6
           C+    + +G ++      E+ +E +I     +VD+ G+
Sbjct: 388 CSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGR 426


>gb|EMT22934.1| hypothetical protein F775_14642 [Aegilops tauschii]
          Length = 491

 Score =  211 bits (536), Expect = 3e-52
 Identities = 111/244 (45%), Positives = 150/244 (61%), Gaps = 1/244 (0%)
 Frame = -2

Query: 731 TMFRALSRSPR-PVESIHLYSRMLRSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVK 555
           T   +L R+ R P     L   +L   + PD L+  F + SC+      +   +H  AV+
Sbjct: 41  TFVNSLLRAARIPAACALLLRFLLLHRLPPDHLSLSFSLHSCTRSPCLPVASLLHSFAVR 100

Query: 554 HGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARW 375
            G   DV+V+N A++ Y    D+ SA +LF    DVADVV+ T +VTG++N   +  ARW
Sbjct: 101 LGHARDVYVLNAAVSAYFRATDVASAERLFSYTKDVADVVTWTTMVTGHANAGDVARARW 160

Query: 374 LFDQMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEA 195
            FD MPERN +SWN M+  YA  G   +A ++FD MP RN ASWSS+++G  QS +C+EA
Sbjct: 161 FFDAMPERNVVSWNTMLGAYASAGMLSKARKVFDIMPSRNAASWSSMVTGLVQSNQCEEA 220

Query: 194 LTVFREMVVRNVTPNESALVSAVSACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDM 15
           L VF EM+   V PNE+ALVSAVSAC+ LR +  G W+H Y    +  MS+IL TA+VDM
Sbjct: 221 LRVFSEMIGTGVVPNEAALVSAVSACSLLRSIEHGMWVHAYAKRELNGMSVILATAIVDM 280

Query: 14  YGKC 3
           YGKC
Sbjct: 281 YGKC 284



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
 Frame = -2

Query: 503 SDWGDMVS----------ARKLFDENVDVADVVSRTALVTGYSNC---RQLDCARWLFD- 366
           + W  MV+          A ++F E +    V +  ALV+  S C   R ++   W+   
Sbjct: 202 ASWSSMVTGLVQSNQCEEALRVFSEMIGTGVVPNEAALVSAVSACSLLRSIEHGMWVHAY 261

Query: 365 ---QMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEA 195
              ++   + I   A+V  Y K G    A+++F  MP +N+ SW+S+I+G A +GR  +A
Sbjct: 262 AKRELNGMSVILATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQA 321

Query: 194 LTVFREMVVRNVTPNESALVSAVSACAQLRDLNQGEWL 81
           L++F +M +  V PN+   +  + AC+    +++G WL
Sbjct: 322 LSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWL 359



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
 Frame = -2

Query: 812 AVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIWPDRLT 633
           A  S+G L  AR +F  +       +++M   L +S +  E++ ++S M+ +G+ P+   
Sbjct: 179 AYASAGMLSKARKVFDIMPSRNAASWSSMVTGLVQSNQCEEALRVFSEMIGTGVVPNEAA 238

Query: 632 FPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENV 453
               + +CS+L S   G  VH +A +                                 +
Sbjct: 239 LVSAVSACSLLRSIEHGMWVHAYAKR--------------------------------EL 266

Query: 452 DVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTMEALQLFD 273
           +   V+  TA+V  Y  C  +  A  +F  MP +N  SWN+M+ G A  G  M+AL LF 
Sbjct: 267 NGMSVILATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQALSLFW 326

Query: 272 KMP----DRNLASWSSIISGFAQSGRCKEALTVFREMV 171
           KM       N  ++  ++   + SG   E   +F +MV
Sbjct: 327 KMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNKMV 364


>gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao]
          Length = 600

 Score =  210 bits (534), Expect = 6e-52
 Identities = 101/280 (36%), Positives = 169/280 (60%)
 Frame = -2

Query: 842 FTVARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRML 663
           F   + +++CA     D  +A   F  +++P  F+YN + + L     P +++  +  ML
Sbjct: 81  FLTNQFVSACATFCRMD--YAILAFTQMQKPNVFVYNALIKGLVHCHNPFQALDYHKHML 138

Query: 662 RSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMV 483
           R+G+WP   TF  L+++C ++   G G+ VH    KHG +S VFV    +  Y++ G   
Sbjct: 139 RAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHGFESHVFVQTALVDFYANVGKFA 198

Query: 482 SARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEG 303
            ++++FDE  D  DV + T +V+G+     L  +R LFD+MPERN  +WNAM+ GYA+ G
Sbjct: 199 ESKRVFDEMPD-RDVFAWTTMVSGFLKAGDLVSSRRLFDEMPERNTATWNAMIDGYARVG 257

Query: 302 NTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVS 123
           +   A   F++MP +++ SW+S+I+ ++++ + +EAL VF EM    V+P+E  + S +S
Sbjct: 258 DVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVSPDEVTMASVIS 317

Query: 122 ACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           ACA L  LN G+ +H Y+M++   + + +G+ALVDMY KC
Sbjct: 318 ACAHLGALNTGKEIHHYVMQNGFYLDVYIGSALVDMYAKC 357


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Fragaria vesca subsp. vesca]
          Length = 540

 Score =  209 bits (532), Expect = 1e-51
 Identities = 108/279 (38%), Positives = 174/279 (62%), Gaps = 1/279 (0%)
 Frame = -2

Query: 836 VARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRS 657
           +  L+ + A+  SG + +A  +F  I  P  FM+NTM R  ++S RP+ ++ LY+RM + 
Sbjct: 48  LGELIFASAMSISGTIGYAHKVFDQITEPNTFMWNTMIRGSAQSLRPLNAVVLYTRMEKR 107

Query: 656 GIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSA 477
           G+ PD  TFPF++++C+ L    +G G+H   V+ G +S+  V N  I  ++  GD+  A
Sbjct: 108 GLRPDDFTFPFVLKACNKLCWVRMGMGIHGKVVRFGFESNASVRNTLIDFHAKCGDLRVA 167

Query: 476 RKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNT 297
             LFD +    DVV+ +AL  GY+   +LD AR LFD+MP ++ +SWN M+ GY K+G  
Sbjct: 168 TALFDGSAR-RDVVAWSALTAGYARRGKLDAARRLFDEMPVKDLVSWNVMITGYTKQGEM 226

Query: 296 MEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSAC 117
             A +LFD++P R++ +W+++I+G+ + G  ++AL +F EM      P+E  ++S +SAC
Sbjct: 227 ESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTMLSLLSAC 286

Query: 116 AQLRDLNQGEWLHKYIME-HMVEMSIILGTALVDMYGKC 3
           A + +L  G+ LH  ++E    E+SII G AL+DMY KC
Sbjct: 287 ADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKC 325



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
 Frame = -2

Query: 539 DVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQM 360
           D+   N  IT Y+  G+M SARKLFDE V   DVV+  A++ GY  C  ++ A  +F++M
Sbjct: 209 DLVSWNVMITGYTKQGEMESARKLFDE-VPRRDVVTWNAMIAGYVRCGCVEQALQMFEEM 267

Query: 359 P----------------------------------------ERNPISWNAMVAGYAKEGN 300
                                                    E + I  NA++  Y+K G+
Sbjct: 268 TSLGEKPDEVTMLSLLSACADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKCGS 327

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSA 120
              AL++F  M +++++SW+S+I G A  G  +E++ +F EM    V P+    V  + A
Sbjct: 328 IERALEVFWGMREKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKVRPDGITFVGVLVA 387

Query: 119 CAQLRDLNQGEWLHKYIM-EHMVEMSIILGTALVDMYGK 6
           C+    +  G      +  ++ +E +I     +VD+ G+
Sbjct: 388 CSHAGKVEDGRGYFSLMRNKYKIEPNIKHYGCMVDLLGR 426


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  209 bits (531), Expect = 1e-51
 Identities = 106/281 (37%), Positives = 170/281 (60%), Gaps = 1/281 (0%)
 Frame = -2

Query: 842 FTVARLLASCAVPSSGD-LHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRM 666
           F  +RL+AS +  S    + +A ++F+ I  P  +M+NT+ RA + SP P  ++ ++ +M
Sbjct: 40  FAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQM 99

Query: 665 LRSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDM 486
           L + + PD+ TF F ++SC        G+ +H H +K GL  D+F+ N  I +Y+  G +
Sbjct: 100 LHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCI 159

Query: 485 VSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKE 306
             AR L D  ++  DVVS  AL++ Y+    ++ A  LFD+M ERN  SWN M++GY   
Sbjct: 160 EDARHLLDRMLE-RDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGV 218

Query: 305 GNTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAV 126
           G   EA ++F + P +N+ SW+++I+G++ +GR  E L +F +M    V P+   LVS +
Sbjct: 219 GLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVL 278

Query: 125 SACAQLRDLNQGEWLHKYIMEHMVEMSIILGTALVDMYGKC 3
           SACA +  L+QGEW+H YI ++ + +   + TALVDMY KC
Sbjct: 279 SACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKC 319



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 1/265 (0%)
 Frame = -2

Query: 797 GDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRMLRSGIWPDRLTFPFLI 618
           G L  AR +F          +N M    S + R  E + L+  M  +G+ PD  T   ++
Sbjct: 219 GLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVL 278

Query: 617 RSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMVSARKLFDENVDVADV 438
            +C+ +G+   G+ VH +  K+G+  D FV    + MYS  G +  A ++F         
Sbjct: 279 SACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVF--------- 329

Query: 437 VSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEGNTMEALQLFDKMPDR 258
                     ++C + D +             +WN++++G +  G+   ALQ        
Sbjct: 330 ----------NSCLRKDIS-------------TWNSIISGLSTHGSGQHALQ-------- 358

Query: 257 NLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVSACAQLRDLNQG-EWL 81
                                  +F EM+V    PNE   V  +SAC++   L++G E  
Sbjct: 359 -----------------------IFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMF 395

Query: 80  HKYIMEHMVEMSIILGTALVDMYGK 6
           +  +  H ++ +I     +VD+ G+
Sbjct: 396 NLMVHVHGIQPTIEHYGCMVDLLGR 420


>ref|XP_002533114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527077|gb|EEF29259.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  207 bits (528), Expect = 3e-51
 Identities = 103/281 (36%), Positives = 174/281 (61%), Gaps = 1/281 (0%)
 Frame = -2

Query: 842 FTVARLLASCAVPSSGDLHHARALFASIERPTPFMYNTMFRALSRSPRPVESIHLYSRML 663
           + +  L+ + A+   G + +A  LF  +  P  FM+NTM R  S+SP P++++ LY++M 
Sbjct: 46  YALRELIFASAIVIPGTIDYAHQLFDQVAEPDIFMWNTMMRGSSQSPSPIKAVSLYTQME 105

Query: 662 RSGIWPDRLTFPFLIRSCSVLGSRGLGQGVHCHAVKHGLDSDVFVVNNAITMYSDWGDMV 483
             GI PD+ TF FL+++C+ L  R +G  +H  A+KHG   + FV N  +  ++  GD+ 
Sbjct: 106 NCGIKPDKFTFSFLLKACTRLEWRNMGFCIHGKALKHGFQENTFVRNTLVYYHAKCGDLG 165

Query: 482 SARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQMPERNPISWNAMVAGYAKEG 303
            AR++FD++    DVV+ +AL  GY+   +L  AR LFD+MP ++ ++WN ++  Y K G
Sbjct: 166 IAREMFDDSAK-RDVVAWSALTAGYARRGELCMARRLFDEMPVKDLVAWNVIITAYVKRG 224

Query: 302 NTMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMVVRNVTPNESALVSAVS 123
               A +LF+++P R++ +W+++I+GF   G  ++AL +F EM+     P+E  ++S +S
Sbjct: 225 EMACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLLS 284

Query: 122 ACAQLRDLNQGEWLHKYIME-HMVEMSIILGTALVDMYGKC 3
           AC  L DL  G+ +H  I+E  + ++S++LG AL  MY KC
Sbjct: 285 ACTDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKC 325



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 41/192 (21%)
 Frame = -2

Query: 539 DVFVVNNAITMYSDWGDMVSARKLFDENVDVADVVSRTALVTGYSNCRQLDCARWLFDQM 360
           D+   N  IT Y   G+M  ARKLF+E V   DVV+  A++ G+ +C + + A  +F++M
Sbjct: 209 DLVAWNVIITAYVKRGEMACARKLFNE-VPRRDVVTWNAMIAGFVHCGENEQALEMFEEM 267

Query: 359 ----------------------------------------PERNPISWNAMVAGYAKEGN 300
                                                    + + +  NA+   YAK G+
Sbjct: 268 ISVGEQPDEVTMLSLLSACTDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGS 327

Query: 299 TMEALQLFDKMPDRNLASWSSIISGFAQSGRCKEALTVFREMV-VRNVTPNESALVSAVS 123
              AL++F  M ++++ +W+S+I G A  G  +E++ +FREM  + N+ PNE   V  + 
Sbjct: 328 IERALEVFRGMREKDVTTWNSVIVGLALHGHAEESIHLFREMQRLNNIKPNEITFVGVLV 387

Query: 122 ACAQLRDLNQGE 87
           AC+    + +G+
Sbjct: 388 ACSHAGKVEEGQ 399