BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00037985
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP33763.1| organelle transcript processing 82, partial [Isat...    87   2e-15
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...    81   1e-13
gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protei...    80   2e-13
gb|AEP33772.1| organelle transcript processing 82, partial [Drab...    80   2e-13
gb|AEP33760.1| organelle transcript processing 82, partial [Caps...    80   2e-13
gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily p...    80   3e-13
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...    80   3e-13
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...    80   3e-13
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    80   3e-13
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe...    80   4e-13
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...    80   4e-13
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...    80   4e-13
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...    80   4e-13
gb|ESW13843.1| hypothetical protein PHAVU_008G230800g [Phaseolus...    79   5e-13
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr...    79   5e-13
gb|EMJ09703.1| hypothetical protein PRUPE_ppa026555mg [Prunus pe...    79   5e-13
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...    79   5e-13
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...    79   6e-13
ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citr...    79   8e-13
ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12

>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ LFD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST+V +L  CAH
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVI--LVDMYAKCGDIES 311
           SG I L +Q H+   V   GFD  ++++  L+D+Y+KCG++E+
Sbjct: 209 SGSIELGRQVHSW--VDDHGFDSNLKIVNALIDLYSKCGEVET 249



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF  +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++G      ++  L+DMYAKCGDIE+
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 352


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ LFD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST V ++  CA 
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H+     GFG +  +   L+D+Y+KCG++E+
Sbjct: 279 SGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++       ++  L+DMYAKCGDIE+
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422


>gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 592

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/97 (41%), Positives = 55/97 (56%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           +FD +   DVV +NC+ISKY   G+ E  ++L   M  K++ PN +T VGLL  CA SG 
Sbjct: 282 VFDEVAVKDVVLWNCMISKYAENGLLEESLALLRLMKVKQVKPNSATLVGLLSACAASGA 341

Query: 198 IGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIE 308
             L +   +     G   D V+   LVDMYAKCG ++
Sbjct: 342 TSLGESIGSYVEESGLPLDAVIGTALVDMYAKCGVLD 378



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +3

Query: 9   AQLLFDRIPQT-DVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCA 185
           A  LFD IP+  DVV +N L+  Y      + +I+L+ EMC   L  +  TF+ +L    
Sbjct: 177 AHTLFDEIPEANDVVSWNSLMGGYLHVSKPDVVIALFREMCCSCLTASVPTFLTVLSAVG 236

Query: 186 HSGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
            +G     +  H   +  GF FD  +   L+DMYAK G++ SGR
Sbjct: 237 EAGDSLGGQSLHGHCLKVGFCFDSNLVSALIDMYAKTGNVYSGR 280


>gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 59/101 (58%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ LFD IP  DVV +N +IS Y   G  +  + L+ +M    + P++ST V ++  CA 
Sbjct: 173 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 232

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H      GFG +  +   L+D+Y+KCG++E+
Sbjct: 233 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVET 273



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336

Query: 198 IGLSKQFHAQAIVQGFGFDEVVQVI--LVDMYAKCGDIESGR 317
           I + +  H     +  G      ++  L+DMYAKCGDIE+ +
Sbjct: 337 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAK 378


>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/101 (39%), Positives = 58/101 (57%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N LIS Y   G  +  + L+ EM    + P++ST V +L  CA 
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           S  I L +Q H+     GFG +  +   L+D+Y KCG++E+
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM      PN+ T + +L  CAH G 
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           I + +  H      ++G      ++  L+DMYAKCGDIE+ +
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQ 393


>gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 731

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/103 (38%), Positives = 60/103 (58%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           A+ LFD +P+ D   +N +I+ Y R G  E  + L+SEM  + ++PN+ TF  +LG C  
Sbjct: 134 ARELFDEMPERDGGSWNTMITAYARNGFQEKALCLFSEMNREGILPNEITFASVLGSCGV 193

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
              +GLS+Q HA  +  G+  + V+   LVD+Y KCG I   R
Sbjct: 194 VLELGLSRQIHAMVVKYGYSNNVVLGSSLVDVYGKCGVISDAR 236



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/87 (35%), Positives = 46/87 (52%)
 Frame = +3

Query: 36  QTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGLIGLSKQ 215
           + D V +N L++ Y R   +E  ++ ++EM   E  P + TF  LL  CA+   +   KQ
Sbjct: 478 ERDTVSWNALLTSYARHHRSEQAMTFFNEM-QWESRPCKFTFGTLLAACANMFALNHGKQ 536

Query: 216 FHAQAIVQGFGFDEVVQVILVDMYAKC 296
            H   I  G+  D V++  LVDMY KC
Sbjct: 537 IHGFMIRNGYELDMVIRGALVDMYCKC 563


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/101 (38%), Positives = 59/101 (58%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ LFD IP  DVV +N +IS Y   G  +  + L+ +M    + P++ST V ++  CA 
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H      GFG +  +   L+D+Y+KCG++E+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+R+P  DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++G      ++  L+DMYAKCGDIE+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L+ +M    + P++ST V ++  CA 
Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H+     GFG +  +   L+D+Y+KCG++E+
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +P  DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++G      ++  L+DMYAKCGDIE+
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEA 379


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/100 (38%), Positives = 60/100 (60%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L++EM   ++ P++ST   +L  C H
Sbjct: 163 AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH 222

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIE 308
           SG + L +Q H+     GFG +  +   L+D+Y+KCG++E
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEME 262



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y      +  + ++ EM      PN  T + +L  CAH G 
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++G   +  +Q  L+DMYAKCG+IE+
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEA 366


>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/104 (40%), Positives = 63/104 (60%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           A+ LFD IP  DVV +N +IS Y ++G  E  ++L+SEM    + PN+ST V +L  CA 
Sbjct: 193 ARYLFDEIPGRDVVSWNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQ 252

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGRT 320
           SG + L K   +    +G G +  +   L+DMYAKCG +++ R+
Sbjct: 253 SGSLELGKWVGSWIENRGLGSNLRLVNALIDMYAKCGALDTARS 296



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           A+ LFD + Q DV+ +N +I  Y      +  ++L+  M      PN  TF+G+L  C+H
Sbjct: 294 ARSLFDGLQQRDVISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSH 353

Query: 189 SGLIGLSKQFHAQAIVQGFG--FDEVVQVILVDMYAKCGDIESGR 317
            G + L K  HA  I + F    +  +   L+DMYAKCG+IE+ +
Sbjct: 354 LGALDLGKWIHAY-IDKNFQSLTNTSLWTSLIDMYAKCGNIEAAK 397


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/101 (37%), Positives = 58/101 (57%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST V ++  CA 
Sbjct: 173 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 232

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           S  I L +Q H+     GFG +  +   L+D+Y KCG++E+
Sbjct: 233 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           I + +  H      ++G       +  L+DMYAKCGDIE+ +
Sbjct: 337 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 378


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/101 (37%), Positives = 59/101 (58%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST   ++  CA 
Sbjct: 160 AQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQ 219

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H+     GFG +  +   L+D+Y+KCG++E+
Sbjct: 220 SGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           L + +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323

Query: 198 IGLSKQFHAQAIVQGFGF----DEVVQVILVDMYAKCGDIES 311
           I + +  H     +  G        ++  L+DMYAKCGDI++
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDA 365


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/101 (37%), Positives = 58/101 (57%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST V ++  CA 
Sbjct: 188 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 247

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           S  I L +Q H+     GFG +  +   L+D+Y KCG++E+
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 351

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           I + +  H      ++G       +  L+DMYAKCGDIE+ +
Sbjct: 352 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 393


>gb|ESW13843.1| hypothetical protein PHAVU_008G230800g [Phaseolus vulgaris]
          Length = 610

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/105 (38%), Positives = 59/105 (56%)
 Frame = +3

Query: 3   GLAQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGC 182
           G A+ +FD +   DV+ +N +IS Y + G+ +  ISL+  M    +  N+ T   +L  C
Sbjct: 272 GSARRIFDSMATRDVITWNAVISGYAQNGMADEAISLFHAMKDDNVKENKITLTAVLSAC 331

Query: 183 AHSGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           A  G + L KQ +  A  +GF  D  V   L+DMYAKCG +ESG+
Sbjct: 332 ATIGALDLGKQINEYASQRGFQHDIFVATALIDMYAKCGSLESGQ 376



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKE-LMPNQSTFVGLLGGCA 185
           A+ +FD IP  D+V +N +I+ Y +AG  +  + ++ EM  ++   P++ + V +LG C 
Sbjct: 172 ARKVFDEIPHRDLVSWNSMIAGYAKAGCAKEAVEVFGEMGRRDGFEPDEMSLVSVLGACG 231

Query: 186 HSGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
             G + L +      + +G   +  V   L+ MYAKCGD+ S R
Sbjct: 232 ELGDLELGRWVEGFVVERGMALNSFVGSALISMYAKCGDLGSAR 275


>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
           gi|557095503|gb|ESQ36085.1| hypothetical protein
           EUTSA_v10006910mg [Eutrema salsugineum]
          Length = 740

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/99 (38%), Positives = 57/99 (57%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +    L+ +M    + P++ST V +L  CA 
Sbjct: 218 AQKMFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDESTMVTVLSACAQ 277

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDI 305
           SG I L +Q H+     GFG +  +   L+D+Y+KCG++
Sbjct: 278 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGEV 316



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DVV +N LI  Y    + +  + L+ EM      PN  T + +L  CAH G 
Sbjct: 322 LFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPNDVTMLSILPACAHLGA 381

Query: 198 IGLSKQFHAQAI--VQGFGFDEVVQVILVDMYAKCGDIES 311
           I + +  H      ++G      ++  L+DMYAKCGDIE+
Sbjct: 382 IDIGRWIHVYIAKKLKGVTNASSLRTSLIDMYAKCGDIEA 421



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/100 (29%), Positives = 49/100 (49%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           +F+ I + + + +N ++  +  +      + LY  M S  L+PN  TF  LL  CA S  
Sbjct: 89  VFETIQEPNQLIWNTMLRGHALSSDPVSSLKLYVSMISLGLLPNSYTFPFLLKSCAKSNT 148

Query: 198 IGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           +   +Q H   +  G+G D  V   L+ MYA+ G +E  +
Sbjct: 149 LREGQQIHGHVLKFGYGLDLYVHTSLISMYAQNGRLEDAQ 188


>gb|EMJ09703.1| hypothetical protein PRUPE_ppa026555mg [Prunus persica]
          Length = 565

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/103 (36%), Positives = 61/103 (59%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           A+ LF+++PQ ++V +N +IS Y + G  E  I L+S+M +    P+++TF+G++G CA 
Sbjct: 267 ARDLFNKMPQRNLVTWNSMISAYNQYGRAEEAIGLFSDMQNAGFAPDEATFLGVIGACAQ 326

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
            G + L +  H+       G D  +   LVDMYAK GD  S +
Sbjct: 327 LGALALGQSLHSYVSKTSMGKDTAIGTALVDMYAKTGDAGSAQ 369



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKY-GRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSG 194
           +FD IP+ +VV +  LIS + G    TE  I ++ +M  + + PN+ T V ++  CA S 
Sbjct: 162 VFDNIPKWNVVAWTSLISGFVGNNQATEA-IKVFKDMELQNVQPNEFTMVHVVVACARSR 220

Query: 195 LIGLSKQFHAQAIVQG-------FGFDEVVQVILVDMYAKCGDIESGR 317
            I   K  H++    G       F F+ V+   ++DMYAKCG + + R
Sbjct: 221 DIDTGKLVHSRIRQLGFDPFGSSFNFNIVLATAILDMYAKCGSLRTAR 268


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/101 (37%), Positives = 59/101 (58%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N +IS Y   G  +  + L+ EM    + P++ST V ++  CA 
Sbjct: 188 AQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ 247

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           SG I L +Q H+     G G +  +   L+D+Y+KCG++E+
Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF  +   DV+ +N +I  Y    + +  + L+ EM      PN  T + +L  CA  G 
Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           I   +  H      ++G      ++  L+DMYAKCGDIE+
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEA 391


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 39/101 (38%), Positives = 57/101 (56%)
 Frame = +3

Query: 9   AQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAH 188
           AQ +FD IP  DVV +N LIS Y   G  +  + L+ EM    + P++ST V +L  C  
Sbjct: 218 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMQTNVKPDESTMVTVLSACGQ 277

Query: 189 SGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIES 311
           S  I L +Q H+     GFG +  +   L+D+Y KCG++E+
Sbjct: 278 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 318



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LF+ +   DV+ +N LI  Y    + +  + L+ EM     +PN+ T + +L  CAH G 
Sbjct: 322 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNEVTMLSILPACAHLGA 381

Query: 198 IGLSKQFHA--QAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
           I + +  H      ++G      ++  L+DMYAKCGDIE+ +
Sbjct: 382 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQ 423


>ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citrus clementina]
           gi|557532232|gb|ESR43415.1| hypothetical protein
           CICLE_v10011274mg [Citrus clementina]
          Length = 636

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/100 (35%), Positives = 59/100 (59%)
 Frame = +3

Query: 18  LFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCAHSGL 197
           LFD++P+  ++ +N +IS Y + G+   ++ LY EM S  + P+  TFVG+L  CAH G 
Sbjct: 224 LFDQVPEKGLITWNAMISGYAQNGLATDVLELYREMKSLGVCPDAVTFVGVLSSCAHLGA 283

Query: 198 IGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
             +  +   Q    GFG +  +   L++MYA+CG+++  R
Sbjct: 284 HSVGLEVEQQIQANGFGSNPFLNNALINMYARCGNLKKAR 323


>ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like isoform X1 [Solanum tuberosum]
           gi|565353404|ref|XP_006343622.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g30700-like isoform X2 [Solanum tuberosum]
          Length = 791

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/104 (39%), Positives = 57/104 (54%)
 Frame = +3

Query: 6   LAQLLFDRIPQTDVVCYNCLISKYGRAGITEGLISLYSEMCSKELMPNQSTFVGLLGGCA 185
           LA+ LFD  P+  +  +N +IS Y + G+TE  ISL+ EM   ++ PN  T   +L  CA
Sbjct: 371 LARRLFDESPKKSLASWNAMISGYAQNGLTEMAISLFREMQKLDIHPNPVTITSILSACA 430

Query: 186 HSGLIGLSKQFHAQAIVQGFGFDEVVQVILVDMYAKCGDIESGR 317
             G + + K  H     + F  +  V   LVDMYAKCG+IE  R
Sbjct: 431 QLGTLSMGKWVHDLIKKEKFESNIYVLTALVDMYAKCGNIEEAR 474