BLASTX nr result
ID: Zingiber24_contig00037885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00037885
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006467434.1| PREDICTED: pentatricopeptide repeat-containi... 113 7e-26
ref|XP_006449728.1| hypothetical protein CICLE_v10014539mg [Citr... 113 7e-26
ref|NP_172636.1| pentatricopeptide repeat-containing protein [Ar... 111 1e-25
gb|EMJ20321.1| hypothetical protein PRUPE_ppa015831mg, partial [... 118 9e-25
ref|XP_006306468.1| hypothetical protein CARUB_v10012420mg [Caps... 108 1e-24
ref|XP_006389622.1| hypothetical protein POPTR_0021s00720g [Popu... 117 1e-24
ref|XP_002316529.1| predicted protein [Populus trichocarpa] 117 1e-24
ref|XP_006417324.1| hypothetical protein EUTSA_v10007012mg [Eutr... 107 3e-24
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ... 108 5e-24
gb|EOY28704.1| Pentatricopeptide repeat superfamily protein, put... 112 4e-23
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,... 107 1e-21
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu... 107 2e-21
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 102 5e-20
ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 100 2e-19
ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp.... 74 3e-13
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab... 70 1e-12
ref|XP_006300775.1| hypothetical protein CARUB_v10019852mg [Caps... 77 2e-12
ref|NP_177597.1| pentatricopeptide repeat-containing protein [Ar... 77 2e-12
ref|XP_002887547.1| pentatricopeptide repeat-containing protein ... 76 4e-12
ref|XP_006298951.1| hypothetical protein CARUB_v10015076mg [Caps... 70 6e-12
>ref|XP_006467434.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11710,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568826147|ref|XP_006467435.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g11710,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 658
Score = 113 bits (283), Expect(2) = 7e-26
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM++ GYVENVNTFNL+IYALC+ECK+ EA + RM+ GI NVV FNM+I+
Sbjct: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVT 288
C+ G+ + A LF+KM +S ++V PN VT
Sbjct: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
Score = 29.3 bits (64), Expect(2) = 7e-26
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 293 NCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
NC+IN CK G+ E E ++ + K G+ N+R
Sbjct: 293 NCIINGFCKLGRVEFAEE-IRYAMIKAGIDCNVR 325
>ref|XP_006449728.1| hypothetical protein CICLE_v10014539mg [Citrus clementina]
gi|557552339|gb|ESR62968.1| hypothetical protein
CICLE_v10014539mg [Citrus clementina]
Length = 658
Score = 113 bits (283), Expect(2) = 7e-26
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM++ GYVENVNTFNL+IYALC+ECK+ EA + RM+ GI NVV FNM+I+
Sbjct: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVT 288
C+ G+ + A LF+KM +S ++V PN VT
Sbjct: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
Score = 29.3 bits (64), Expect(2) = 7e-26
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 293 NCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
NC+IN CK G+ E E ++ + K G+ N+R
Sbjct: 293 NCIINGFCKLGRVEFAEE-IRYAMIKAGIDCNVR 325
>ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14
[Arabidopsis thaliana] gi|22655109|gb|AAM98145.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis
thaliana] gi|332190652|gb|AEE28773.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 111 bits (277), Expect(2) = 1e-25
Identities = 52/93 (55%), Positives = 66/93 (70%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM +LGYVENVNTFNL+IY+ C+E K+ EA V RM+ G+ NVV+FNM+ID
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ A L KM +S N V PN VT+
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Score = 30.8 bits (68), Expect(2) = 1e-25
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
+N +IN CKAG+ +L E ++ D+ K G+ N R
Sbjct: 294 YNSVINGFCKAGRLDLAER-IRGDMVKSGVDCNER 327
>gb|EMJ20321.1| hypothetical protein PRUPE_ppa015831mg, partial [Prunus persica]
Length = 480
Score = 118 bits (295), Expect = 9e-25
Identities = 53/93 (56%), Positives = 70/93 (75%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM++ GYVENVNTFNL+IYALC+ECK+ EA RM+ GI +VVTFNM+ID
Sbjct: 94 FWKLYKEMVSYGYVENVNTFNLVIYALCKECKLLEAMSEYYRMLKSGIWPSVVTFNMIID 153
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ +LA L +KM +S V PN+V++
Sbjct: 154 GACKMGDMELALKLLRKMGVMSGECVTPNLVSY 186
>ref|XP_006306468.1| hypothetical protein CARUB_v10012420mg [Capsella rubella]
gi|482575179|gb|EOA39366.1| hypothetical protein
CARUB_v10012420mg [Capsella rubella]
Length = 656
Score = 108 bits (271), Expect(2) = 1e-24
Identities = 52/93 (55%), Positives = 65/93 (69%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM +LGYVENVNTFNL+IY+ C+E K+ EA V RM+ G+ NVV+FNM+ID
Sbjct: 201 FWKVYKEMDSLGYVENVNTFNLVIYSFCKENKLLEALSVFYRMLKCGVWPNVVSFNMMID 260
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G A L KM +S N V PN VT+
Sbjct: 261 GACKAGNMGFALQLLGKMGVMSGNFVSPNAVTY 293
Score = 30.0 bits (66), Expect(2) = 1e-24
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
+N LIN CKAG+ +L E ++ D+ G+ N R
Sbjct: 293 YNSLINGFCKAGRLDLAER-IRGDMVNSGVGCNER 326
>ref|XP_006389622.1| hypothetical protein POPTR_0021s00720g [Populus trichocarpa]
gi|550312451|gb|ERP48536.1| hypothetical protein
POPTR_0021s00720g [Populus trichocarpa]
Length = 540
Score = 117 bits (294), Expect = 1e-24
Identities = 49/93 (52%), Positives = 72/93 (77%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FW +YKEM++ GY+ENVNTFN++++ALC++CK+ EA V R++ GI NVVTFNM++D
Sbjct: 84 FWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVD 143
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ DLA L +KME +S +++PN VT+
Sbjct: 144 GACKMGDMDLALKLVRKMEIMSAGSIKPNSVTY 176
Score = 51.2 bits (121), Expect(2) = 1e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +1
Query: 10 TFWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLI 189
T K +++ +E+ + N+LI LC+ + A +L RM G+ +VVTF LI
Sbjct: 296 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLI 355
Query: 190 DGCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
DG C+ G + A ++ KM K +PN++ +
Sbjct: 356 DGHCKEGNIESAVQVYDKM---VKGEEKPNLLVY 386
Score = 23.5 bits (49), Expect(2) = 1e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 287 LFNCLINALCKAGKSELGEHLV 352
++N +IN LCK G ++ LV
Sbjct: 385 VYNSIINGLCKDGLVDVARSLV 406
>ref|XP_002316529.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 117 bits (294), Expect = 1e-24
Identities = 49/93 (52%), Positives = 72/93 (77%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FW +YKEM++ GY+ENVNTFN++++ALC++CK+ EA V R++ GI NVVTFNM++D
Sbjct: 222 FWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVD 281
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ DLA L +KME +S +++PN VT+
Sbjct: 282 GACKMGDMDLALKLVRKMEIMSAGSIKPNSVTY 314
Score = 51.2 bits (121), Expect(2) = 1e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +1
Query: 10 TFWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLI 189
T K +++ +E+ + N+LI LC+ + A +L RM G+ +VVTF LI
Sbjct: 434 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLI 493
Query: 190 DGCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
DG C+ G + A ++ KM K +PN++ +
Sbjct: 494 DGHCKEGNIESAVQVYDKM---VKGEEKPNLLVY 524
Score = 23.5 bits (49), Expect(2) = 1e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 287 LFNCLINALCKAGKSELGEHLV 352
++N +IN LCK G ++ LV
Sbjct: 523 VYNSIINGLCKDGLVDVARSLV 544
>ref|XP_006417324.1| hypothetical protein EUTSA_v10007012mg [Eutrema salsugineum]
gi|557095095|gb|ESQ35677.1| hypothetical protein
EUTSA_v10007012mg [Eutrema salsugineum]
Length = 662
Score = 107 bits (266), Expect(2) = 3e-24
Identities = 50/93 (53%), Positives = 66/93 (70%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWK+YKEM +LGYVENVNTFNL+IY+ C++ K+ EA V RM+ G+ NVV+FNM+ID
Sbjct: 203 FWKVYKEMDSLGYVENVNTFNLVIYSCCKKNKLLEALSVFYRMLKCGVWPNVVSFNMMID 262
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ A + KM +S N V PN VT+
Sbjct: 263 GACKTGDMGFALLILGKMGVMSGNFVSPNAVTY 295
Score = 30.4 bits (67), Expect(2) = 3e-24
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
+N +IN CKAG+ +L E ++ D+ K G+ N R
Sbjct: 295 YNSVINGFCKAGRLDLAER-IRIDMVKSGVGCNER 328
>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335732|gb|EFH66149.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 108 bits (269), Expect(2) = 5e-24
Identities = 52/93 (55%), Positives = 65/93 (69%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FW +YKEM +LGYVENVNTFNL+IY+ C+E K+ EA V RM+ GI NVV+FNM+ID
Sbjct: 202 FWMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMID 261
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G C+ G+ A L KM +S N V PN VT+
Sbjct: 262 GACKTGDMRFALQLLGKMGVMSGNFVSPNAVTY 294
Score = 28.5 bits (62), Expect(2) = 5e-24
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKRDIAKKGLLSNMR 394
+N +IN CKAG+ +L E ++ ++ K G+ N R
Sbjct: 294 YNSVINGFCKAGRLDLAER-IRGEMVKLGVDCNER 327
>gb|EOY28704.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 722
Score = 112 bits (281), Expect = 4e-23
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FW +Y EM++ Y+ENVNTFNL+IYALC+EC+I EA RM+ GI NVVTFNM+I+
Sbjct: 264 FWNVYNEMVSYRYIENVNTFNLVIYALCKECRILEAISAFYRMLKSGIWPNVVTFNMIIN 323
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G CR G+ +LA L +KM +S N+V N+VT+
Sbjct: 324 GACRMGDIELALKLVRKMGVMSGNSVSLNLVTY 356
>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 107 bits (268), Expect = 1e-21
Identities = 52/93 (55%), Positives = 69/93 (74%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FWKMYKEM++ GY+ENVNTFNL+IYAL +E ++ EA V+ R + GI NVVTFNM+ID
Sbjct: 147 FWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIID 206
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
G + G DLA L +KME +S +V+P+ VT+
Sbjct: 207 GAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTY 239
>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 107 bits (267), Expect = 2e-21
Identities = 52/93 (55%), Positives = 65/93 (69%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
FW MY EM+A GY ENVNTFNL+IYALC+ECK+ EA V+ M+ I NVV+FNM+ID
Sbjct: 198 FWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIID 257
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
+ GE DLA L + E +S +V PNIVT+
Sbjct: 258 KASKMGEMDLALKLTRNTEVISGGSVSPNIVTY 290
>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 653
Score = 102 bits (254), Expect = 5e-20
Identities = 53/93 (56%), Positives = 63/93 (67%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
F MYKEMIA GY ENVNTFNL+IYALC ECK+ EA V+ M+ I NVVTFNM+ID
Sbjct: 198 FXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIID 257
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
+ GE DLA L + E +S +V PNIV +
Sbjct: 258 KANKMGEMDLALKLTRNTEVISGGSVSPNIVAY 290
>ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 644
Score = 100 bits (250), Expect = 2e-19
Identities = 52/93 (55%), Positives = 63/93 (67%)
Frame = +1
Query: 13 FWKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLID 192
F MYKEMIA GY ENVNTFNL+IYALC ECK+ EA V+ M+ I NVV FNM+ID
Sbjct: 198 FXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIID 257
Query: 193 GCCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
+ GE DLA L + +E +S +V PNIV +
Sbjct: 258 KANKMGEMDLALKLTRNIEVISGGSVSPNIVAY 290
>ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 74.3 bits (181), Expect(2) = 3e-13
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +1
Query: 16 WKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDG 195
+ ++ EMIA G NV+T+ +LI LCR+ KI EA GV +M+ GI +V+T+N LI+G
Sbjct: 321 FNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALING 380
Query: 196 CCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
C++G A+ L ME K A +PN+ TF
Sbjct: 381 YCKDGRVVPAFELLTVME---KRACKPNVRTF 409
Score = 25.8 bits (55), Expect(2) = 3e-13
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKR 358
FN L+ LC+ GK HL+KR
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKR 431
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +1
Query: 58 NVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRNGEFDLAYSLF 237
NV TFN L+ LCR K +A +L RM++ G+S ++V++N+LIDG CR G ++AY L
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLL 464
Query: 238 KKMEFVSKNAVEPNIVTF 291
M +EP+ +TF
Sbjct: 465 TSMNSFD---LEPDCLTF 479
Score = 23.9 bits (50), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 290 FNCLINALCKAGKSEL 337
F +INA CK GK+++
Sbjct: 479 FTAIINAFCKQGKADV 494
Score = 53.9 bits (128), Expect(2) = 1e-05
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +1
Query: 46 GYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRNGEFDLA 225
G + T+ +LI ALC I +AF + MI G NV T+ +LIDG CR+G+ + A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 226 YSLFKKMEFVSKNAVEPNIVTF 291
+ +KM K+ + P+++T+
Sbjct: 356 NGVCRKM---VKDGIFPSVITY 374
Score = 20.8 bits (42), Expect(2) = 1e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 290 FNCLINALCKAGK 328
+N LIN CK G+
Sbjct: 374 YNALINGYCKDGR 386
>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +1
Query: 31 EMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRNG 210
+++ LGY + TFN LI LC E K+SEA ++ RM+ G NVVT+N +++G C++G
Sbjct: 125 KVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSG 184
Query: 211 EFDLAYSLFKKME 249
+ LA L +KM+
Sbjct: 185 DTSLALDLLRKMD 197
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 269 LSQTL*LFNCLINALCKAGKSELGEHLVKRDIAKKGLLSNM 391
+ +L +N L+ LCKAGK G L+K D+ + ++ N+
Sbjct: 236 IKSSLVTYNSLVGGLCKAGKWNDGVQLLK-DMTSRKIIPNV 275
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/93 (35%), Positives = 50/93 (53%)
Frame = +1
Query: 19 KMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGC 198
++YKEMI G N T+N L+ C + ++SEA +L M+ S ++VTF LI G
Sbjct: 296 ELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGY 355
Query: 199 CRNGEFDLAYSLFKKMEFVSKNAVEPNIVTFQL 297
C+ D LF+K +SK + N VT+ +
Sbjct: 356 CKVKRVDEGMKLFRK---ISKRGLVANTVTYSI 385
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 19 KMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGC 198
++ K+M + + NV TFN+LI +E K+ EA + MI GIS N +T+N L+DG
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320
Query: 199 CRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
C A ++ ++ + +N P+IVTF
Sbjct: 321 CMQNRLSEANNM---LDLMVRNNCSPDIVTF 348
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/91 (26%), Positives = 57/91 (62%)
Frame = +1
Query: 19 KMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGC 198
++++EM++LG + +V T+ +L+ LC K+ +A + + ++L++V + ++I+G
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Query: 199 CRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
C+ G+ + A++LF + V+PN++T+
Sbjct: 461 CKGGKVEDAWNLFCSLPC---KGVKPNVMTY 488
Score = 55.1 bits (131), Expect = 1e-05
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +1
Query: 28 KEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRN 207
K+M G N+ T N++I CR CK A+ VL +++ G + TFN LI+G C
Sbjct: 89 KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148
Query: 208 GEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
+ A L +M +N +PN+VT+
Sbjct: 149 SKVSEAVVLVARM---VENGCQPNVVTY 173
>ref|XP_006300775.1| hypothetical protein CARUB_v10019852mg [Capsella rubella]
gi|482569485|gb|EOA33673.1| hypothetical protein
CARUB_v10019852mg [Capsella rubella]
Length = 760
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +1
Query: 25 YKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCR 204
YK M+ G N+ TFN+L+ +LCR K+ EA G+L M N ++ + VTF LIDG C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEAMGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 205 NGEFDLAYSLFKKMEFVSK 261
NG+ D AY+LF+K E V K
Sbjct: 579 NGDLDRAYTLFRKTEEVYK 597
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/92 (30%), Positives = 52/92 (56%)
Frame = +1
Query: 22 MYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCC 201
+ K MI+ GY ++ TFN+LI+ + K+ A ++ M++ G+ +V T+N L++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIINVMLDNGVDPDVYTYNSLLNGLC 507
Query: 202 RNGEFDLAYSLFKKMEFVSKNAVEPNIVTFQL 297
+ +++ +K M V K PN+ TF +
Sbjct: 508 KTSKYEDVMETYKTM--VEKGCA-PNLFTFNI 536
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +1
Query: 34 MIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRNGE 213
+I G +V T+N LIY LC+ K EA L +M+NGGI + T+N LI G C++G
Sbjct: 277 LIEQGPKPDVVTYNNLIYGLCKNIKFQEAEAYLGKMVNGGIEPDSFTYNTLIAGYCKSGM 336
Query: 214 FDLAYSLFKKMEFVSKNAVEPNIVTFQ 294
LA + F N P+ T++
Sbjct: 337 VQLAERILGNAVF---NGFVPDEFTYR 360
>ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g74580 gi|12324819|gb|AAG52381.1|AC011765_33
hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/75 (49%), Positives = 51/75 (68%)
Frame = +1
Query: 25 YKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCR 204
YK M+ G N+ TFN+L+ +LCR K+ EA G+L M N ++ + VTF LIDG C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 205 NGEFDLAYSLFKKME 249
NG+ D AY+LF+KME
Sbjct: 579 NGDLDGAYTLFRKME 593
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = +1
Query: 22 MYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCC 201
+ K MI+ GY ++ TFN+LI+ + K+ A +L M++ G+ +V T+N L++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 202 RNGEFDLAYSLFKKMEFVSKNAVEPNIVTFQL 297
+ +F+ +K M V K PN+ TF +
Sbjct: 508 KTSKFEDVMETYKTM--VEKGCA-PNLFTFNI 536
>ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333388|gb|EFH63806.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 763
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +1
Query: 25 YKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCR 204
YK M+ G N+ TFN+L+ +LCR K+ +A G+L M N ++ + VTF LIDG C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 205 NGEFDLAYSLFKKMEFV 255
NG+ D AY+LF+KME V
Sbjct: 579 NGDLDGAYTLFRKMEEV 595
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +1
Query: 22 MYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCC 201
+ K MI+ GY ++ TFN+LI+ + K+ A +L M++ G+ +V T+N L++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Query: 202 RNGEFDLAYSLFKKMEFVSKNAVEPNIVTFQL 297
+ +++ +K M V K PN+ TF +
Sbjct: 508 KTSKYEDVMETYKTM--VEKGCA-PNLFTFNI 536
>ref|XP_006298951.1| hypothetical protein CARUB_v10015076mg [Capsella rubella]
gi|482567660|gb|EOA31849.1| hypothetical protein
CARUB_v10015076mg [Capsella rubella]
Length = 880
Score = 70.1 bits (170), Expect(2) = 6e-12
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +1
Query: 16 WKMYKEMIALGYVENVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDG 195
+ M+ EM A G N +T+ +LI LCR+ KI EA GV M+ GI +++T+N LI+G
Sbjct: 321 FSMFDEMTARGCKPNAHTYTVLIDGLCRDGKIKEANGVFRNMVKDGIFPSIITYNALING 380
Query: 196 CCRNGEFDLAYSLFKKMEFVSKNAVEPNIVTF 291
C++G A+ L ME K A +PN+ TF
Sbjct: 381 YCKDGLVVPAFELLTVME---KRACKPNVRTF 409
Score = 25.8 bits (55), Expect(2) = 6e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 290 FNCLINALCKAGKSELGEHLVKR 358
FN L+ LC+ GK HL+KR
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKR 431
Score = 62.4 bits (150), Expect(2) = 9e-09
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 58 NVNTFNLLIYALCRECKISEAFGVLCRMINGGISLNVVTFNMLIDGCCRNGEFDLAYSLF 237
NV TFN L+ LCR K +A +L RM++ G+S ++V++N+LIDG CR G +AY L
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMVDNGLSPDIVSYNILIDGLCREGHMSMAYKLL 464
Query: 238 KKMEFVSKNAVEPNIVTF 291
M +EP+ +T+
Sbjct: 465 NVMNSFD---LEPDCLTY 479
Score = 22.7 bits (47), Expect(2) = 9e-09
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 290 FNCLINALCKAGKSEL 337
+ +INA CK GK+++
Sbjct: 479 YTAIINAFCKQGKADV 494