BLASTX nr result
ID: Zingiber24_contig00037642
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00037642 (214 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006580422.1| PREDICTED: THO complex subunit 2-like isofor... 57 2e-06 ref|XP_006580421.1| PREDICTED: THO complex subunit 2-like isofor... 57 2e-06 ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi... 56 4e-06 >ref|XP_006580422.1| PREDICTED: THO complex subunit 2-like isoform X2 [Glycine max] Length = 1845 Score = 57.4 bits (137), Expect = 2e-06 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = +3 Query: 3 GMPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESDQLH 152 GMP YDGR+R D+K I Q +YI+E+ RIHGKEA K+NRR+SD L+ Sbjct: 1776 GMPLAYDGRDRGDRKGPI-MQHPSYIDESSLRIHGKEAASKLNRRDSDPLY 1825 >ref|XP_006580421.1| PREDICTED: THO complex subunit 2-like isoform X1 [Glycine max] Length = 1870 Score = 57.4 bits (137), Expect = 2e-06 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = +3 Query: 3 GMPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESDQLH 152 GMP YDGR+R D+K I Q +YI+E+ RIHGKEA K+NRR+SD L+ Sbjct: 1801 GMPLAYDGRDRGDRKGPI-MQHPSYIDESSLRIHGKEAASKLNRRDSDPLY 1850 >ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi|223533086|gb|EEF34845.1| tho2 protein, putative [Ricinus communis] Length = 1828 Score = 56.2 bits (134), Expect = 4e-06 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%) Frame = +3 Query: 6 MPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESD 143 M Q YDGRER D+ A+I QRA Y+EE P RIHGKE GK+ RR++D Sbjct: 1772 MSQSYDGRERGDRGALI--QRAGYLEEPPMRIHGKEVAGKMTRRDAD 1816