BLASTX nr result

ID: Zingiber24_contig00037642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00037642
         (214 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006580422.1| PREDICTED: THO complex subunit 2-like isofor...    57   2e-06
ref|XP_006580421.1| PREDICTED: THO complex subunit 2-like isofor...    57   2e-06
ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi...    56   4e-06

>ref|XP_006580422.1| PREDICTED: THO complex subunit 2-like isoform X2 [Glycine max]
          Length = 1845

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +3

Query: 3    GMPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESDQLH 152
            GMP  YDGR+R D+K  I  Q  +YI+E+  RIHGKEA  K+NRR+SD L+
Sbjct: 1776 GMPLAYDGRDRGDRKGPI-MQHPSYIDESSLRIHGKEAASKLNRRDSDPLY 1825


>ref|XP_006580421.1| PREDICTED: THO complex subunit 2-like isoform X1 [Glycine max]
          Length = 1870

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +3

Query: 3    GMPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESDQLH 152
            GMP  YDGR+R D+K  I  Q  +YI+E+  RIHGKEA  K+NRR+SD L+
Sbjct: 1801 GMPLAYDGRDRGDRKGPI-MQHPSYIDESSLRIHGKEAASKLNRRDSDPLY 1850


>ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi|223533086|gb|EEF34845.1|
            tho2 protein, putative [Ricinus communis]
          Length = 1828

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +3

Query: 6    MPQLYDGRERADKKAVIGQQRAAYIEEAP-RIHGKEAVGKINRRESD 143
            M Q YDGRER D+ A+I  QRA Y+EE P RIHGKE  GK+ RR++D
Sbjct: 1772 MSQSYDGRERGDRGALI--QRAGYLEEPPMRIHGKEVAGKMTRRDAD 1816


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