BLASTX nr result
ID: Zingiber24_contig00037571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00037571
(240 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis] 106 4e-21
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S... 100 3e-19
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19
gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus... 99 8e-19
ref|XP_006415097.1| hypothetical protein EUTSA_v10009638mg [Eutr... 99 8e-19
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
emb|CBI40590.3| unnamed protein product [Vitis vinifera] 99 8e-19
ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protei... 98 1e-18
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|ESW24420.1| hypothetical protein PHAVU_004G129300g [Phaseolus... 97 2e-18
gb|ESW16323.1| hypothetical protein PHAVU_007G146900g [Phaseolus... 97 2e-18
ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citr... 97 2e-18
ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citr... 97 2e-18
ref|XP_006664504.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens] 97 3e-18
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus... 96 4e-18
ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
>ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 521
Score = 107 bits (267), Expect = 2e-21
Identities = 46/77 (59%), Positives = 63/77 (81%)
Frame = -2
Query: 233 SWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFDSM 54
SWNSIIG YA++G++TRALEEF++M + G+RPD ITF VL+AC HGG++++G F+SM
Sbjct: 339 SWNSIIGGYARHGIATRALEEFERMTDCGVRPDAITFTNVLSACAHGGMIEDGKSLFNSM 398
Query: 53 ERKFCIEPRLEHYGCMV 3
+ KF +EP +EHY CMV
Sbjct: 399 KAKFEVEPEVEHYACMV 415
>gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis]
Length = 522
Score = 106 bits (264), Expect = 4e-21
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V SWNSIIG YA++GL+ RAL+EF++M + GI+PD +TFV VL+AC HGGL+++GV +F
Sbjct: 338 VVSWNSIIGGYARHGLAMRALDEFERMRKSGIKPDQVTFVNVLSACAHGGLIEQGVKHFG 397
Query: 59 SMERKFCIEPRLEHYGCMV 3
SM + I+P +EHY CMV
Sbjct: 398 SMAESYEIQPEVEHYACMV 416
>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein
SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 99.8 bits (247), Expect = 3e-19
Identities = 43/79 (54%), Positives = 61/79 (77%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V++WNSIIG A +G T A++ FQKM++ ++PD ITFV VL AC HGG+VD+G YF+
Sbjct: 345 VSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFN 404
Query: 59 SMERKFCIEPRLEHYGCMV 3
M++++ IEP ++HYGCMV
Sbjct: 405 LMQQRYMIEPNVKHYGCMV 423
>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 531
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWNSIIG A+NG++TRALEEF +M + G+ PD +TFV VL+ACVH GLV+EG +F
Sbjct: 352 LVSWNSIIGGCARNGIATRALEEFDRMKKAGVTPDEVTFVNVLSACVHAGLVEEGEKHFT 411
Query: 59 SMERKFCIEPRLEHYGCMV 3
SM K+ I+ +EHY CMV
Sbjct: 412 SMLTKYEIQAEMEHYTCMV 430
>gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus vulgaris]
Length = 670
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/79 (56%), Positives = 57/79 (72%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWNS+I YA NG + +A+E F KM G PD ITFV +LTAC HGGLV +G YFD
Sbjct: 447 LVSWNSMIAGYAANGRAKQAVEVFDKMRCMGFEPDDITFVSLLTACSHGGLVSQGKEYFD 506
Query: 59 SMERKFCIEPRLEHYGCMV 3
+MERK+ I+P+ EHY CM+
Sbjct: 507 TMERKYGIKPKKEHYACMI 525
>ref|XP_006415097.1| hypothetical protein EUTSA_v10009638mg [Eutrema salsugineum]
gi|557092868|gb|ESQ33450.1| hypothetical protein
EUTSA_v10009638mg [Eutrema salsugineum]
Length = 521
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ +WNS+I C+A +G S A+ F+ M++ I+PD ITF+ +L AC HGGLV +G YFD
Sbjct: 312 LTAWNSMINCFALHGRSEEAIAVFEDMMKLNIKPDHITFIGLLNACTHGGLVSKGRLYFD 371
Query: 59 SMERKFCIEPRLEHYGCMV 3
M +FCIEPR+EHYGC++
Sbjct: 372 LMTNRFCIEPRIEHYGCLI 390
>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWNS+I A +G A+E F KM+ EG PD +TFV VL AC HGG+V EG H+F+
Sbjct: 282 LCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFE 341
Query: 59 SMERKFCIEPRLEHYGCMV 3
SMER F I P+LEHYGCMV
Sbjct: 342 SMERDFSIAPKLEHYGCMV 360
>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWNS+I A +G A+E F KM+ EG PD +TFV VL AC HGG+V EG H+F+
Sbjct: 282 LCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFE 341
Query: 59 SMERKFCIEPRLEHYGCMV 3
SMER F I P+LEHYGCMV
Sbjct: 342 SMERDFSIAPKLEHYGCMV 360
>ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Citrus sinensis]
Length = 762
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/77 (53%), Positives = 59/77 (76%)
Frame = -2
Query: 233 SWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFDSM 54
SW +II YA++GLS AL+ F++M + G++P+ +TF+CVL AC HGGLV+EG+HYF M
Sbjct: 542 SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHYFQQM 601
Query: 53 ERKFCIEPRLEHYGCMV 3
+ KF + P +EHY C+V
Sbjct: 602 KEKFGLVPEMEHYACIV 618
>gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 527
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/82 (52%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIE---EGIRPDPITFVCVLTACVHGGLVDEGVH 69
+ SWNSII C+A +G S RA+ F++MI+ EG+RPD +TF+ +L AC HGGLV++G
Sbjct: 314 LTSWNSIINCFALHGQSDRAISLFEEMIKCRAEGVRPDAVTFIGLLNACTHGGLVEKGRA 373
Query: 68 YFDSMERKFCIEPRLEHYGCMV 3
YF+ M + IEPR+EHYGC++
Sbjct: 374 YFELMTSSYNIEPRIEHYGCLI 395
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/79 (55%), Positives = 59/79 (74%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V SW SII +AK+G + RA+E F +M+E+GI+P+ +T++ VL+AC H GLVDEG YFD
Sbjct: 543 VISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNEVTYIAVLSACSHVGLVDEGWKYFD 602
Query: 59 SMERKFCIEPRLEHYGCMV 3
SM + I PR+EHY CMV
Sbjct: 603 SMSKNHGITPRMEHYACMV 621
>ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Citrus sinensis]
Length = 471
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V+SW S+I YA NGL+ AL+ F M E GIRP+ +TFV VL+ACVHGG V EG H+F+
Sbjct: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
Query: 59 SMERKFCIEPRLEHYGCMV 3
M+ + IEPR HYGCMV
Sbjct: 350 MMKNVYQIEPRFAHYGCMV 368
>gb|ESW24420.1| hypothetical protein PHAVU_004G129300g [Phaseolus vulgaris]
Length = 522
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIE--EGIRPDPITFVCVLTACVHGGLVDEGVHY 66
+ SWNS+I C+A +G S A+ F++M+ G+RPD ITF+ +L AC HGGLVD+G Y
Sbjct: 303 LTSWNSMINCFALHGQSDSAIAVFEQMVGCGGGVRPDEITFIGLLNACTHGGLVDQGYRY 362
Query: 65 FDSMERKFCIEPRLEHYGCMV 3
F+ M R++ IEPR+EHYGC++
Sbjct: 363 FEMMGREYGIEPRIEHYGCLI 383
>gb|ESW16323.1| hypothetical protein PHAVU_007G146900g [Phaseolus vulgaris]
Length = 491
Score = 97.4 bits (241), Expect = 2e-18
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V +W++++ +A +GLS LE F +M+ +G+RP+ +TFV VL ACVHGGLV+EG YF
Sbjct: 261 VMAWSAMVAAFAMHGLSDECLELFARMVNDGVRPNAVTFVGVLCACVHGGLVNEGEEYFK 320
Query: 59 SMERKFCIEPRLEHYGCMV 3
M ++CI P ++HYGCMV
Sbjct: 321 RMLNQYCISPTIQHYGCMV 339
>ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citrus clementina]
gi|557554491|gb|ESR64505.1| hypothetical protein
CICLE_v10008215mg [Citrus clementina]
Length = 461
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V+SW S+I YA NGL+ AL+ F M E GIRP+ +TFV VL+ACVHGG V EG H+F+
Sbjct: 280 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 339
Query: 59 SMERKFCIEPRLEHYGCMV 3
M+ + IEPR HYGCMV
Sbjct: 340 MMKNVYQIEPRFAHYGCMV 358
>ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citrus clementina]
gi|557524949|gb|ESR36255.1| hypothetical protein
CICLE_v10027922mg [Citrus clementina]
Length = 705
Score = 97.1 bits (240), Expect = 2e-18
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 230 WNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFDSME 51
WN+II C+ +G +AL F++M++EG+RPD ITFV +LTAC H GLV EG YF M+
Sbjct: 402 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 461
Query: 50 RKFCIEPRLEHYGCMV 3
+F I+P L+HYGCMV
Sbjct: 462 EEFGIKPHLKHYGCMV 477
>ref|XP_006664504.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 799
Score = 96.7 bits (239), Expect = 3e-18
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWN++I YA NG A+ F++M + G+RPD +T VCVL+AC H GL+DEG+H+F+
Sbjct: 518 IVSWNALIDGYASNGNGVEAIAVFREMEDNGVRPDEVTLVCVLSACSHAGLIDEGLHFFN 577
Query: 59 SMERKFCIEPRLEHYGCMV 3
S+ + + +EP EHY CMV
Sbjct: 578 SIIKMYSLEPVAEHYACMV 596
>dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/79 (56%), Positives = 60/79 (75%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
V SW S+I YA++G ALE F +M +EG++PD ITFV L+AC H GL++EG+H+F
Sbjct: 681 VYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740
Query: 59 SMERKFCIEPRLEHYGCMV 3
SM ++F IEPR+EHYGCMV
Sbjct: 741 SM-KEFNIEPRMEHYGCMV 758
>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
Length = 561
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = -2
Query: 239 VASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFD 60
+ SWNSIIG +A+NGL RAL+EF +M G++PD +TFV VL+ACVH GLV EG +F
Sbjct: 383 LVSWNSIIGGFARNGLGNRALKEFDRMKTVGVKPDEVTFVNVLSACVHAGLVQEGEKHFT 442
Query: 59 SMERKFCIEPRLEHYGCMV 3
SM K+ I+ +EH+ CMV
Sbjct: 443 SMLSKYGIQAEMEHFTCMV 461
>ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Fragaria vesca subsp. vesca]
Length = 633
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = -2
Query: 236 ASWNSIIGCYAKNGLSTRALEEFQKMIEEGIRPDPITFVCVLTACVHGGLVDEGVHYFDS 57
A+W S+I A NG++++ALE F KM + I PD ITF+ VL+AC HGGLVDEG + FDS
Sbjct: 404 ATWTSMICALAMNGMTSKALELFSKMKQVRINPDDITFIGVLSACSHGGLVDEGQNLFDS 463
Query: 56 MERKFCIEPRLEHYGCMV 3
M + + +EP+LEHYGC++
Sbjct: 464 MRKDYGMEPKLEHYGCLI 481