BLASTX nr result

ID: Zingiber24_contig00037493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00037493
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004970494.1| PREDICTED: two-component response regulator-...    56   4e-06

>ref|XP_004970494.1| PREDICTED: two-component response regulator-like PRR37-like
           [Setaria italica]
          Length = 349

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 55/179 (30%), Positives = 71/179 (39%), Gaps = 42/179 (23%)
 Frame = -2

Query: 412 DGSLLHYQNCPSFG---SPTAPCEF-------YHDSNGGXXXXXXXXXXXPAE------Y 281
           D +L+H+Q+  SF    S T P +        Y D N G            +       Y
Sbjct: 16  DAALMHHQHAASFSAALSVTVPAQIPRGAAAGYLDGNVGAFSSPPTSSCYSSSSLPSSYY 75

Query: 280 YDLRRXXXXXSLPLHLY----------------APDPTIHHHXXXXXXXXXXXXXXSDYL 149
             ++R     SLP+HL                 +P     H                D  
Sbjct: 76  NSIQRSISSHSLPVHLQLADVSFGAGGGSNGFLSPSSPSPHQLPLPPLSSSPSSSSGDLF 135

Query: 148 NFHAA-PVRRVLSAGDLQRKHGSP--------ENYGQEGGGA-SGRVGKYSAEERKERI 2
            F ++ PVRRV S GDLQ  +GS         +  GQEGGG  S +VG+YSAEERKERI
Sbjct: 136 EFTSSCPVRRVFSTGDLQGMNGSSPPRPVPSGDGCGQEGGGPFSQKVGRYSAEERKERI 194


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