BLASTX nr result
ID: Zingiber24_contig00037490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00037490
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ03733.1| hypothetical protein PRUPE_ppa011044mg [Prunus pe... 103 3e-20
ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi... 103 3e-20
ref|XP_004288022.1| PREDICTED: F-box protein At5g67140-like [Fra... 99 4e-19
ref|XP_002306478.1| hypothetical protein POPTR_0005s18320g [Popu... 99 8e-19
gb|EOX91469.1| F-box/RNI-like superfamily protein isoform 4 [The... 98 1e-18
gb|EOX91467.1| F-box/RNI-like superfamily protein isoform 2 [The... 98 1e-18
gb|EOX91466.1| F-box/RNI-like superfamily protein isoform 1 [The... 98 1e-18
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc... 98 1e-18
ref|XP_006393912.1| hypothetical protein EUTSA_v10004869mg [Eutr... 97 2e-18
ref|XP_006281049.1| hypothetical protein CARUB_v10027065mg [Caps... 97 2e-18
ref|XP_006339878.1| PREDICTED: F-box protein At5g67140-like [Sol... 96 4e-18
ref|XP_004233602.1| PREDICTED: F-box protein At5g67140-like [Sol... 96 4e-18
ref|NP_201515.1| F-box/RNI-like superfamily protein [Arabidopsis... 96 4e-18
gb|EXC31739.1| hypothetical protein L484_001772 [Morus notabilis] 94 2e-17
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub... 94 2e-17
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ... 92 7e-17
ref|XP_006425925.1| hypothetical protein CICLE_v10026421mg [Citr... 92 9e-17
ref|XP_006425923.1| hypothetical protein CICLE_v10026421mg [Citr... 92 9e-17
ref|XP_006856487.1| hypothetical protein AMTR_s00046p00073790 [A... 91 2e-16
ref|XP_004964754.1| PREDICTED: F-box protein At5g67140-like isof... 89 6e-16
>gb|EMJ03733.1| hypothetical protein PRUPE_ppa011044mg [Prunus persica]
Length = 226
Score = 103 bits (256), Expect = 3e-20
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
KTIVLWSCRHVTE+GL+ LVN CRKLE+IN+WG RVPVDCF++LL ISPALKIKP+ L
Sbjct: 157 KTIVLWSCRHVTENGLLVLVNSCRKLESINLWGTRVPVDCFIALLTISPALKIKPVGLLL 216
Query: 183 GV 188
V
Sbjct: 217 NV 218
>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
gi|296082395|emb|CBI21400.3| unnamed protein product
[Vitis vinifera]
Length = 232
Score = 103 bits (256), Expect = 3e-20
Identities = 50/70 (71%), Positives = 58/70 (82%), Gaps = 2/70 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
KTIVLWSCRHVTE+GL+ LV+KCRKL++INVWG RVPVDCF +LLAI PAL+IKP L
Sbjct: 162 KTIVLWSCRHVTENGLLVLVSKCRKLQSINVWGTRVPVDCFFALLAIRPALQIKPGRLLL 221
Query: 183 GVGRI--WPV 206
V R+ WPV
Sbjct: 222 NVERVSMWPV 231
>ref|XP_004288022.1| PREDICTED: F-box protein At5g67140-like [Fragaria vesca subsp.
vesca]
Length = 226
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
KTIVLWSCRHVTE+GL+ LVN CRKLE+INVWG RVPV+CF++LL ISPAL+IKP
Sbjct: 157 KTIVLWSCRHVTENGLLVLVNSCRKLESINVWGTRVPVECFIALLTISPALQIKP 211
>ref|XP_002306478.1| hypothetical protein POPTR_0005s18320g [Populus trichocarpa]
gi|222855927|gb|EEE93474.1| hypothetical protein
POPTR_0005s18320g [Populus trichocarpa]
Length = 228
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
K+IVLWSCRHVTE GL+ L NKCRKLE+INVWG RVPV+CF+ LL ISP+L+IKP L
Sbjct: 158 KSIVLWSCRHVTEIGLLNLANKCRKLESINVWGTRVPVNCFIDLLTISPSLQIKPPGVLL 217
Query: 183 GVG--RIWPVA 209
VG I PVA
Sbjct: 218 NVGGAAILPVA 228
>gb|EOX91469.1| F-box/RNI-like superfamily protein isoform 4 [Theobroma cacao]
Length = 252
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +3
Query: 6 TIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
+IVLWSCRHVTE+GLI LV+KCRKLE+INVWG RVP+DCF+ LL ISPALKIKP
Sbjct: 199 SIVLWSCRHVTENGLIVLVSKCRKLESINVWGTRVPLDCFIGLLTISPALKIKP 252
>gb|EOX91467.1| F-box/RNI-like superfamily protein isoform 2 [Theobroma cacao]
Length = 190
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +3
Query: 6 TIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
+IVLWSCRHVTE+GLI LV+KCRKLE+INVWG RVP+DCF+ LL ISPALKIKP
Sbjct: 137 SIVLWSCRHVTENGLIVLVSKCRKLESINVWGTRVPLDCFIGLLTISPALKIKP 190
>gb|EOX91466.1| F-box/RNI-like superfamily protein isoform 1 [Theobroma cacao]
Length = 211
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +3
Query: 6 TIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
+IVLWSCRHVTE+GLI LV+KCRKLE+INVWG RVP+DCF+ LL ISPALKIKP
Sbjct: 158 SIVLWSCRHVTENGLIVLVSKCRKLESINVWGTRVPLDCFIGLLTISPALKIKP 211
>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
protein At5g67140-like [Cucumis sativus]
Length = 235
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/54 (81%), Positives = 51/54 (94%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIK 164
KTIVLWSCRHVTE GL+ LV+KCRKLE+INVWGMRVPVDCF+ L+AISP+L+IK
Sbjct: 170 KTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIK 223
>ref|XP_006393912.1| hypothetical protein EUTSA_v10004869mg [Eutrema salsugineum]
gi|557090551|gb|ESQ31198.1| hypothetical protein
EUTSA_v10004869mg [Eutrema salsugineum]
Length = 228
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPI 170
KTI +W CRHVTE GL+ LVNKCRKLE+IN+WG R+PVDCF++LL ISPAL+IKPI
Sbjct: 157 KTISMWCCRHVTERGLLVLVNKCRKLESINLWGTRIPVDCFIALLTISPALEIKPI 212
>ref|XP_006281049.1| hypothetical protein CARUB_v10027065mg [Capsella rubella]
gi|482549753|gb|EOA13947.1| hypothetical protein
CARUB_v10027065mg [Capsella rubella]
Length = 228
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPI 170
KTI +W CRHVTE GL+ LVNKCRKLE+IN+WG RVPVDCF++LL ISPAL+IKPI
Sbjct: 157 KTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLTISPALQIKPI 212
>ref|XP_006339878.1| PREDICTED: F-box protein At5g67140-like [Solanum tuberosum]
Length = 230
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
K+IVLW CRHVTE+GL+ LVNKCRKLE+IN WGMRV VDCFV LL ISPAL+I+P
Sbjct: 166 KSIVLWGCRHVTENGLLALVNKCRKLESINAWGMRVTVDCFVGLLTISPALQIEP 220
>ref|XP_004233602.1| PREDICTED: F-box protein At5g67140-like [Solanum lycopersicum]
Length = 225
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP 167
K+IVLW CRHVTE+GL+ LVNKCRKLE+IN WGMRV VDCFV LL ISPAL+I+P
Sbjct: 161 KSIVLWGCRHVTENGLLALVNKCRKLESINAWGMRVTVDCFVGLLTISPALQIEP 215
>ref|NP_201515.1| F-box/RNI-like superfamily protein [Arabidopsis thaliana]
gi|75262475|sp|Q9FH99.1|FB302_ARATH RecName: Full=F-box
protein At5g67140 gi|10177601|dbj|BAB10948.1| unnamed
protein product [Arabidopsis thaliana]
gi|18252175|gb|AAL61920.1| unknown protein [Arabidopsis
thaliana] gi|21386939|gb|AAM47873.1| unknown protein
[Arabidopsis thaliana] gi|332010923|gb|AED98306.1|
F-box/RNI-like superfamily protein [Arabidopsis
thaliana]
Length = 228
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPI 170
KTI +W CRHVTE GL+ LVNKCRKLE+IN+WG RVPVDCF++LL ISPAL+IKP+
Sbjct: 157 KTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLTISPALQIKPM 212
>gb|EXC31739.1| hypothetical protein L484_001772 [Morus notabilis]
Length = 227
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
K+IVLWSCRHV+E+GL+ LVNKCRKL+ INVWG RVPVDCF+ LL I PAL+IK + L
Sbjct: 157 KSIVLWSCRHVSENGLLVLVNKCRKLKMINVWGTRVPVDCFIVLLTIRPALQIKTRSLLL 216
Query: 183 GVG 191
VG
Sbjct: 217 TVG 219
>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310860|gb|EFH41284.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 228
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPI 170
KTI +W CRHVTE GL+ LVNKC KLE+IN+WG RVPVDCF++LL ISPAL+IKP+
Sbjct: 157 KTIGMWCCRHVTERGLLVLVNKCGKLESINLWGTRVPVDCFIALLTISPALQIKPM 212
>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 227
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
K+I LWSCRHVTE GLI LVNKCRKLE+IN WG RVP+DCF+ LL +SPAL+IK L
Sbjct: 157 KSIGLWSCRHVTEIGLIYLVNKCRKLESINAWGTRVPIDCFLCLLTVSPALRIKHGGFLL 216
Query: 183 GVGR--IWPVA 209
+G + PVA
Sbjct: 217 NIGNASMLPVA 227
>ref|XP_006425925.1| hypothetical protein CICLE_v10026421mg [Citrus clementina]
gi|557527915|gb|ESR39165.1| hypothetical protein
CICLE_v10026421mg [Citrus clementina]
Length = 169
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP--ITQ 176
K+IVLWSCR VT +GL+ LVNKC +LE+INVWG R+P+DCF+ LL ISPAL+IKP +
Sbjct: 99 KSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLPLDCFIGLLTISPALQIKPEGLLL 158
Query: 177 QLGVGRIWPVA 209
GV + PVA
Sbjct: 159 NAGVASMLPVA 169
>ref|XP_006425923.1| hypothetical protein CICLE_v10026421mg [Citrus clementina]
gi|567866603|ref|XP_006425924.1| hypothetical protein
CICLE_v10026421mg [Citrus clementina]
gi|568824390|ref|XP_006466585.1| PREDICTED: F-box
protein At5g67140-like [Citrus sinensis]
gi|557527913|gb|ESR39163.1| hypothetical protein
CICLE_v10026421mg [Citrus clementina]
gi|557527914|gb|ESR39164.1| hypothetical protein
CICLE_v10026421mg [Citrus clementina]
Length = 227
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKP--ITQ 176
K+IVLWSCR VT +GL+ LVNKC +LE+INVWG R+P+DCF+ LL ISPAL+IKP +
Sbjct: 157 KSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLPLDCFIGLLTISPALQIKPEGLLL 216
Query: 177 QLGVGRIWPVA 209
GV + PVA
Sbjct: 217 NAGVASMLPVA 227
>ref|XP_006856487.1| hypothetical protein AMTR_s00046p00073790 [Amborella trichopoda]
gi|548860368|gb|ERN17954.1| hypothetical protein
AMTR_s00046p00073790 [Amborella trichopoda]
Length = 228
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
K IVLWSCRH+TE GL LV+ CRKLE+INVWG+RV ++ ++ LLAISPAL+IKP L
Sbjct: 158 KAIVLWSCRHITERGLTALVSNCRKLESINVWGLRVSLESYIGLLAISPALQIKPGDMHL 217
Query: 183 GVGR--IWPVA 209
V + +W VA
Sbjct: 218 NVRKLPLWAVA 228
>ref|XP_004964754.1| PREDICTED: F-box protein At5g67140-like isoform X2 [Setaria
italica]
Length = 232
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = +3
Query: 3 KTIVLWSCRHVTEHGLIELVNKCRKLEAINVWGMRVPVDCFVSLLAISPALKIKPITQQL 182
K+I+LWSCRHVTE GL+ LVN CR+LE INV GMRVP + FV LL+ISPAL+I+ I Q L
Sbjct: 166 KSIILWSCRHVTEAGLVALVNNCRRLECINVGGMRVPPESFVGLLSISPALRIRSIPQIL 225
Query: 183 GVG 191
G
Sbjct: 226 NAG 228