BLASTX nr result
ID: Zingiber24_contig00037435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00037435
(437 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containi... 157 2e-36
ref|XP_003603974.1| Pentatricopeptide repeat-containing protein ... 156 3e-36
gb|EMJ02917.1| hypothetical protein PRUPE_ppa003482mg [Prunus pe... 154 1e-35
ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containi... 153 2e-35
gb|EXC04410.1| hypothetical protein L484_008746 [Morus notabilis] 149 5e-34
ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33
ref|XP_006349085.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-33
ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Popu... 145 5e-33
ref|XP_002330082.1| predicted protein [Populus trichocarpa] 145 5e-33
ref|XP_004251020.1| PREDICTED: pentatricopeptide repeat-containi... 145 7e-33
ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containi... 143 2e-32
gb|AAS79604.1| putative pentatricopeptide repeat-containing prot... 142 4e-32
ref|XP_006355278.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citr... 141 8e-32
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr... 140 1e-31
ref|XP_006281977.1| hypothetical protein CARUB_v10028201mg [Caps... 140 1e-31
ref|XP_004244886.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_002865693.1| pentatricopeptide repeat-containing protein ... 140 1e-31
ref|NP_199702.1| protein LOW PSII ACCUMULATION 66 [Arabidopsis t... 140 2e-31
ref|XP_006395137.1| hypothetical protein EUTSA_v10003805mg [Eutr... 140 2e-31
>ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cicer arietinum]
Length = 576
Score = 157 bits (396), Expect = 2e-36
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L+ EG+ PK SEV+L+M+D+EK +QL HHSE+LA+A+GLI T PG KI +VKNLRSCEDC
Sbjct: 480 LKKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDC 539
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MKLISKVY R+I +RDRIRFHHF+NG CSCKDYW
Sbjct: 540 HEFMKLISKVYQRDIIVRDRIRFHHFINGDCSCKDYW 576
>ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 566
Score = 156 bits (394), Expect = 3e-36
Identities = 70/97 (72%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LR EG+ PK SEV+L+M+D+EK +QL HHSE+LA+A+GLI T PG KI +VKNLRSCEDC
Sbjct: 470 LRKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDC 529
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MKLISKVY R+I +RDRIRFHHF NG CSCKDYW
Sbjct: 530 HEFMKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
>gb|EMJ02917.1| hypothetical protein PRUPE_ppa003482mg [Prunus persica]
Length = 571
Score = 154 bits (389), Expect = 1e-35
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LR EG+ PK SEVLL+++D+EK QL HHSE+LA+AFGLI T+PG +I +VKNLRSCE+C
Sbjct: 475 LRKEGYDPKLSEVLLEIDDEEKAFQLSHHSEKLALAFGLIRTSPGSEIRIVKNLRSCENC 534
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MKLISKVY REI +RDRIRFHHF NG CSC+DYW
Sbjct: 535 HAVMKLISKVYQREIIMRDRIRFHHFKNGDCSCRDYW 571
>ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera] gi|297744424|emb|CBI37686.3| unnamed
protein product [Vitis vinifera]
Length = 571
Score = 153 bits (387), Expect = 2e-35
Identities = 66/97 (68%), Positives = 83/97 (85%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L+ EG+ PK SEVLL++++ EK QL HHSE+LAVAFGLI T+PG +I +VKNLRSCEDC
Sbjct: 475 LKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDC 534
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+ +KLISK+Y ++I +RDRIRFHHF+NG CSCKDYW
Sbjct: 535 HSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
>gb|EXC04410.1| hypothetical protein L484_008746 [Morus notabilis]
Length = 248
Score = 149 bits (375), Expect = 5e-34
Identities = 65/97 (67%), Positives = 80/97 (82%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LR EG+ PK SEVLL+++D+EK QL HHSE+LA+AFGLI T+PG +I + KNLRSCEDC
Sbjct: 152 LREEGYQPKVSEVLLEIDDEEKAFQLSHHSEKLALAFGLIKTSPGSEIRIAKNLRSCEDC 211
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MK+ISK+Y R+I +RDRI FHHF NG CSC+DYW
Sbjct: 212 HAFMKVISKIYQRDIIMRDRILFHHFSNGDCSCRDYW 248
>ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 146 bits (369), Expect = 2e-33
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
+R EG+ P+ SEVLL+M+D+EK +QL HHSE+LA+A+GLI G I +VKNLRSCEDC
Sbjct: 476 IRKEGYDPRVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDC 535
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MKLISK+Y R+I +RDRIRFHHF NG CSCKDYW
Sbjct: 536 HEFMKLISKIYKRDIIVRDRIRFHHFKNGECSCKDYW 572
>ref|XP_006349085.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum tuberosum]
Length = 578
Score = 145 bits (366), Expect = 5e-33
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
+R EG+ PK SEVLL+++DDEK QL HHSE+LAV+FGLI T+PG I +VKNLRSCEDC
Sbjct: 482 VRREGYDPKVSEVLLEIDDDEKASQLLHHSEKLAVSFGLIRTDPGTVIRIVKNLRSCEDC 541
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+ MKLISK+Y REI IRDRIR+HHF +G CSC D W
Sbjct: 542 HSFMKLISKLYQREIIIRDRIRYHHFKDGECSCGDRW 578
>ref|XP_006382375.1| hypothetical protein POPTR_0005s01560g [Populus trichocarpa]
gi|550337735|gb|ERP60172.1| hypothetical protein
POPTR_0005s01560g [Populus trichocarpa]
Length = 545
Score = 145 bits (366), Expect = 5e-33
Identities = 63/97 (64%), Positives = 81/97 (83%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L++EGF+P S+VL D+E++EK +L +HSE+LA+AFGLI+T PG I VVKNLR CEDC
Sbjct: 449 LKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDC 508
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+A KLIS+VYDREI +RDR R+HHF G+CSCKD+W
Sbjct: 509 HSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 545
>ref|XP_002330082.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 145 bits (366), Expect = 5e-33
Identities = 63/97 (64%), Positives = 81/97 (83%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L++EGF+P S+VL D+E++EK +L +HSE+LA+AFGLI+T PG I VVKNLR CEDC
Sbjct: 569 LKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDC 628
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+A KLIS+VYDREI +RDR R+HHF G+CSCKD+W
Sbjct: 629 HSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
>ref|XP_004251020.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum lycopersicum]
Length = 581
Score = 145 bits (365), Expect = 7e-33
Identities = 67/97 (69%), Positives = 80/97 (82%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
+R EG+ PK SEVLL+++DDEK QL HHSE+LAV+FGLI T+PG I +VKNLRSCEDC
Sbjct: 485 VRREGYDPKVSEVLLEIDDDEKASQLLHHSEKLAVSFGLIRTDPGTVIRIVKNLRSCEDC 544
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+ MKLISK+Y REI IRDRIR+HHF +G CSC D W
Sbjct: 545 HSFMKLISKLYHREIIIRDRIRYHHFKDGECSCGDRW 581
>ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 143 bits (361), Expect = 2e-32
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
+R EG+ P+ SEVLL+M+D+EK +QL HHSE+LA+A+GLI G I +VKNLRSCEDC
Sbjct: 446 IRKEGYDPRVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIWIVKNLRSCEDC 505
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H MKLISK+ R+I +RDRIRFHHF NG CSCKDYW
Sbjct: 506 HEFMKLISKICKRDIVVRDRIRFHHFKNGECSCKDYW 542
>gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida] gi|118562903|dbj|BAF37793.1| hypothetical
protein [Ipomoea trifida]
Length = 575
Score = 142 bits (359), Expect = 4e-32
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LR EG+ P SEVLL+++DDEK QL HHSE+LAV+FGL+ ++PG I +VKNLRSCEDC
Sbjct: 479 LRGEGYNPIVSEVLLEIDDDEKASQLLHHSEKLAVSFGLVKSSPGSVIRIVKNLRSCEDC 538
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+ MKLISKVY R+I +RDRIRFHHF G+CSC D W
Sbjct: 539 HSFMKLISKVYQRDIIVRDRIRFHHFSGGNCSCGDRW 575
>ref|XP_006355278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum tuberosum]
Length = 585
Score = 142 bits (358), Expect = 5e-32
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRLEG+ P S VL D+E++EK L +HSE++A+AF LIST PG I +VKNLR C DC
Sbjct: 489 LRLEGYVPHTSNVLADIEEEEKETALAYHSEKIAIAFMLISTPPGTPIRIVKNLRVCADC 548
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H A+KLISKV+DREI +RDR RFHHF NGSCSCKDYW
Sbjct: 549 HLAIKLISKVFDREIVVRDRSRFHHFTNGSCSCKDYW 585
>ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citrus clementina]
gi|568853066|ref|XP_006480188.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g48910-like [Citrus sinensis]
gi|557545919|gb|ESR56897.1| hypothetical protein
CICLE_v10019256mg [Citrus clementina]
Length = 642
Score = 141 bits (356), Expect = 8e-32
Identities = 61/97 (62%), Positives = 79/97 (81%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L L G+ PK ++VLL+ME++ K LH+HSE++A+ FGLISTNPG + +VKNLR CEDC
Sbjct: 546 LSLSGYRPKTTQVLLNMEEEGKESALHYHSEKIAIGFGLISTNPGTTLRIVKNLRICEDC 605
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+++KLISK+Y R+I +RDR RFHHF NGSCSC DYW
Sbjct: 606 HSSLKLISKIYKRKIIVRDRKRFHHFENGSCSCMDYW 642
>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
gi|568824869|ref|XP_006466814.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557527644|gb|ESR38894.1| hypothetical protein
CICLE_v10025166mg [Citrus clementina]
Length = 622
Score = 140 bits (354), Expect = 1e-31
Identities = 62/97 (63%), Positives = 74/97 (76%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
L+ EG P +LLD+EDDEK +H HSE+LA+AFGLI T PG I ++KNLR CEDC
Sbjct: 526 LKREGHKPAIRNLLLDLEDDEKETAIHQHSEKLAIAFGLIKTEPGVTIRIIKNLRVCEDC 585
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
HT MKLISK+YDREI +RDR RFHHF +G C+C DYW
Sbjct: 586 HTVMKLISKIYDREIVMRDRTRFHHFKDGRCTCGDYW 622
>ref|XP_006281977.1| hypothetical protein CARUB_v10028201mg [Capsella rubella]
gi|482550681|gb|EOA14875.1| hypothetical protein
CARUB_v10028201mg [Capsella rubella]
Length = 646
Score = 140 bits (354), Expect = 1e-31
Identities = 62/97 (63%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRL G+ P ++VLL++E+++K LH+HSE++A AFGLIST+PG+ I +VKNLR CEDC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENALHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+++KLISKVY R+IT+RDR RFHHF +GSCSC DYW
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>ref|XP_004244886.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum lycopersicum]
Length = 585
Score = 140 bits (354), Expect = 1e-31
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRLEG+ P S VL D+E++EK L +HSE++A+AF LIST PG I +VKNLR C DC
Sbjct: 489 LRLEGYVPHTSNVLADIEEEEKETALAYHSEKIAIAFMLISTPPGTPIRIVKNLRVCADC 548
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H A+KLISKV++REI +RDR RFHHF NGSCSCKDYW
Sbjct: 549 HLAIKLISKVFEREIVVRDRSRFHHFTNGSCSCKDYW 585
>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311528|gb|EFH41952.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 640
Score = 140 bits (354), Expect = 1e-31
Identities = 62/97 (63%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRL G+ P ++VLL++E+++K LH+HSE++A AFGLIST+PG+ I +VKNLR CEDC
Sbjct: 544 LRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDC 603
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+++KLISKVY R+IT+RDR RFHHF +GSCSC DYW
Sbjct: 604 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
>ref|NP_199702.1| protein LOW PSII ACCUMULATION 66 [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding
protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| protein LOW PSII
ACCUMULATION 66 [Arabidopsis thaliana]
Length = 646
Score = 140 bits (353), Expect = 2e-31
Identities = 62/97 (63%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRL G+ P ++VLL++E+++K LH+HSE++A AFGLIST+PG+ I +VKNLR CEDC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+++KLISKVY R+IT+RDR RFHHF +GSCSC DYW
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>ref|XP_006395137.1| hypothetical protein EUTSA_v10003805mg [Eutrema salsugineum]
gi|557091776|gb|ESQ32423.1| hypothetical protein
EUTSA_v10003805mg [Eutrema salsugineum]
Length = 645
Score = 140 bits (352), Expect = 2e-31
Identities = 62/97 (63%), Positives = 82/97 (84%)
Frame = +1
Query: 1 LRLEGFTPKASEVLLDMEDDEKILQLHHHSERLAVAFGLISTNPGEKILVVKNLRSCEDC 180
LRL G+ P ++VLL++E+++K LH+HSE++AVAFGLIST+P + I +VKNLR CEDC
Sbjct: 549 LRLAGYRPITTQVLLNLEEEDKENALHYHSEKIAVAFGLISTSPAKPIRIVKNLRICEDC 608
Query: 181 HTAMKLISKVYDREITIRDRIRFHHFVNGSCSCKDYW 291
H+++KLISKVY R+IT+RDR RFHHF +GSCSC DYW
Sbjct: 609 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 645