BLASTX nr result
ID: Zingiber24_contig00037427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00037427
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 169 4e-40
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 169 4e-40
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 169 4e-40
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 169 4e-40
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 169 4e-40
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi... 169 4e-40
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 168 6e-40
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 167 1e-39
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 167 1e-39
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 167 1e-39
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 167 1e-39
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 167 1e-39
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 167 1e-39
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 166 2e-39
emb|CBL87031.1| RNA polymerase [Nuphar advena] 166 3e-39
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 166 3e-39
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 164 9e-39
ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 164 9e-39
gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 164 1e-38
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 164 1e-38
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 839
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 440 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 499
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 500 KRWWLGAEDPFQCLAVCINLTEALRSPS 527
>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 703
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 413 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 472
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 473 KRWWLGAEDPFQCLAVCINLTEALRSPS 500
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 618 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 677
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 678 KRWWLGAEDPFQCLAVCINLTEALRSPS 705
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 618 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 677
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 678 KRWWLGAEDPFQCLAVCINLTEALRSPS 705
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 584 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 643
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 644 KRWWLGAEDPFQCLAVCINLTEALRSPS 671
>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
Length = 845
Score = 169 bits (428), Expect = 4e-40
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRIAFTE+HLEDIFDSADRPLEG
Sbjct: 446 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEG 505
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL EALRS S
Sbjct: 506 KRWWLGAEDPFQCLAVCINLTEALRSPS 533
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 168 bits (426), Expect = 6e-40
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGR+ F E+HLEDIFDSADRPLEG
Sbjct: 607 GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLEFVENHLEDIFDSADRPLEG 666
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
GRWWL AEDPFQCL+ C+NL+EALRSSS
Sbjct: 667 GRWWLGAEDPFQCLAACVNLSEALRSSS 694
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 167 bits (424), Expect = 1e-39
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRI+FTE+HL+DIFDSADRPLEG
Sbjct: 463 GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEG 522
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VCINL+EALRS S
Sbjct: 523 QRWWLGAEDPFQCLAVCINLSEALRSPS 550
>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 932
Score = 167 bits (424), Expect = 1e-39
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSY+GRIAFTE+HL+DIFDSADRPLEG
Sbjct: 597 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEG 656
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRSSS
Sbjct: 657 RRWWLSAEDPFQCLAACINLSEALRSSS 684
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 167 bits (424), Expect = 1e-39
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSY+GRIAFTE+HL+DIFDSADRPLEG
Sbjct: 597 GVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEG 656
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRSSS
Sbjct: 657 RRWWLSAEDPFQCLAACINLSEALRSSS 684
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 167 bits (424), Expect = 1e-39
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLAN+Y GGV+KLSY+GR+AFTE+HLEDIFDSADRPLEG
Sbjct: 411 GILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEG 470
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRSSS
Sbjct: 471 RRWWLSAEDPFQCLATCINLSEALRSSS 498
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 167 bits (424), Expect = 1e-39
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLANL+ GGV+KLSYDGRIAFTE+HL+DIFDSADRPLEG
Sbjct: 190 GILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEG 249
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL+AEDPFQCL+VCI+L EALRSSS
Sbjct: 250 KRWWLNAEDPFQCLAVCIDLTEALRSSS 277
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 167 bits (424), Expect = 1e-39
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLAN+Y GGV+KLSY+GR+AFTE+HLEDIFDSADRPLEG
Sbjct: 579 GILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEG 638
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRSSS
Sbjct: 639 RRWWLSAEDPFQCLATCINLSEALRSSS 666
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 166 bits (421), Expect = 2e-39
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGL WLKIHLANLY GGV+KLSYDGR+AFTE+HLE+IFDSADRPLEG
Sbjct: 577 GILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEG 636
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VC+NL EALRSSS
Sbjct: 637 KRWWLGAEDPFQCLAVCMNLTEALRSSS 664
>emb|CBL87031.1| RNA polymerase [Nuphar advena]
Length = 990
Score = 166 bits (420), Expect = 3e-39
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGR+AF E+HL+DIFDSAD+PLEG
Sbjct: 598 GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFVENHLDDIFDSADKPLEG 657
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRSSS
Sbjct: 658 SRWWLGAEDPFQCLAACINLSEALRSSS 685
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 166 bits (420), Expect = 3e-39
Identities = 76/88 (86%), Positives = 86/88 (97%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEF+EGRPLG+SGLRWLKIHLANLYGGGV+KLSYDGRIAFTE+HLEDIFDSA+RPLEG
Sbjct: 463 GVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEG 522
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL+AEDPFQCL+VC++L EALRSSS
Sbjct: 523 KRWWLEAEDPFQCLAVCMDLNEALRSSS 550
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 164 bits (416), Expect = 9e-39
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSGLRWLKIHLANLY GGV+KLSYDGRI+FTE+HL+DIFDSAD+PLEG
Sbjct: 589 GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEG 648
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRS S
Sbjct: 649 RRWWLGAEDPFQCLAACINLSEALRSPS 676
>ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Cicer arietinum]
Length = 1002
Score = 164 bits (416), Expect = 9e-39
Identities = 75/88 (85%), Positives = 82/88 (93%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
GILEFAEGRPLGKSG++WLKIHLANLYGGGV+KL YDGRIAFTE HL+DIFDSADRPLEG
Sbjct: 603 GILEFAEGRPLGKSGMQWLKIHLANLYGGGVDKLCYDGRIAFTEDHLDDIFDSADRPLEG 662
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+ CINL+EALRS +
Sbjct: 663 KRWWLQAEDPFQCLAACINLSEALRSDT 690
>gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Aegilops tauschii]
Length = 884
Score = 164 bits (415), Expect = 1e-38
Identities = 75/88 (85%), Positives = 85/88 (96%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEF+EGRPLG+SGLRWLKIHLANLYGGGV+KLSYDGRIAFTE+HLEDIFDSA+RPLEG
Sbjct: 472 GVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEG 531
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL+AEDPFQCL+VC++L EALRS S
Sbjct: 532 KRWWLEAEDPFQCLAVCMDLNEALRSPS 559
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 164 bits (415), Expect = 1e-38
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +3
Query: 3 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEG 182
G+LEFAEGRPLGKSGLRWLKIHLANLY GV+KLSYDGRIAF E+HLE+IFDSADRPLEG
Sbjct: 576 GVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRPLEG 635
Query: 183 GRWWLDAEDPFQCLSVCINLAEALRSSS 266
RWWL AEDPFQCL+VC+NL EALRSSS
Sbjct: 636 RRWWLGAEDPFQCLAVCMNLTEALRSSS 663