BLASTX nr result

ID: Zingiber24_contig00037164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00037164
         (444 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]    86   4e-15
emb|CBI39039.3| unnamed protein product [Vitis vinifera]               79   8e-13
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha...    70   4e-10
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]            68   1e-09
gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [...    66   5e-09
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus...    66   5e-09

>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
          Length = 150

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 60/135 (44%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
 Frame = +1

Query: 1   FLLRLILGGVFRGLK*KFFA----AHSALILIHVAIARTFLFRVDLPPTPRNRSSEAGVT 168
           F LRLI G +  G++  FF     +H  L+L+     +    R DLPPTPRNRSS     
Sbjct: 19  FFLRLIRGLLLWGIQFLFFLLLLISHRELLLL----VQGHQMR-DLPPTPRNRSSGR--- 70

Query: 169 NEKNNVSIVSERDEDFLIEES*GLDSPLSL*KPLH*GEQKRKDEYVLDSRIHSRPDPPWN 348
               ++SI                       KPL  GEQK +DEYVLDSRIHSRPDPPWN
Sbjct: 71  LPSTHLSIYK---------------------KPLPRGEQKLQDEYVLDSRIHSRPDPPWN 109

Query: 349 LRNLLKHYRRGLVLL 393
            RNL KH RRG V++
Sbjct: 110 FRNLPKHSRRGFVMI 124


>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/91 (50%), Positives = 51/91 (56%)
 Frame = +1

Query: 121 DLPPTPRNRSSEAGVTNEKNNVSIVSERDEDFLIEES*GLDSPLSL*KPLH*GEQKRKDE 300
           DLPPTPRNRSS         ++SI                       KPL  GEQK +DE
Sbjct: 126 DLPPTPRNRSSGR---LPSTHLSIYK---------------------KPLSRGEQKLQDE 161

Query: 301 YVLDSRIHSRPDPPWNLRNLLKHYRRGLVLL 393
           YVLDSRIHSRPDPPWN  NL KH RRG V++
Sbjct: 162 YVLDSRIHSRPDPPWNFWNLPKHSRRGFVMI 192


>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
           gi|42570727|ref|NP_973437.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|44888124|sp|P93308.1|M530_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00530;
           AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|330250966|gb|AEC06060.1| uncharacterized protein
           AT2G07776 [Arabidopsis thaliana]
          Length = 109

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
 Frame = +1

Query: 121 DLPPTPRNRSSE------AGVTNEKNNVSIVSERDEDFLIEES*GLDSPLSL*KPLH*GE 282
           DL PTPRNRS+       + V N   ++SI                       K L  GE
Sbjct: 27  DLLPTPRNRSNGRLPSPFSRVINPSTHLSIHK---------------------KALPRGE 65

Query: 283 QKRKDEYVLDSRIHSRPDPPWNLRNLLKHYRRGLVLL 393
           +K +DEY LDSRIHSRPDP WN RNL KH R+GLV++
Sbjct: 66  RKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102


>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
          Length = 109

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
 Frame = +1

Query: 121 DLPPTPRNRSSE------AGVTNEKNNVSIVSERDEDFLIEES*GLDSPLSL*KPLH*GE 282
           DL PTPRNRS+       + V N   ++ I                       K L  GE
Sbjct: 27  DLLPTPRNRSNGRLPSPFSRVINPSTHLPIHK---------------------KALPRGE 65

Query: 283 QKRKDEYVLDSRIHSRPDPPWNLRNLLKHYRRGLVLL 393
           +K +DEY LDSRIHSRPDP WN RNL KH R+GLV++
Sbjct: 66  RKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102


>gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [Raphanus sativus]
           gi|443298178|gb|AGC81722.1| hypothetical protein
           DCGMS_00620 (mitochondrion) [Raphanus sativus]
          Length = 159

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = +1

Query: 262 KPLH*GEQKRKDEYVLDSRIHSRPDPPWNLRNLLKHYRRGLVLL 393
           K L  GE+K +DEY LDSRIHSRPDP WN RNL KH R+GLV++
Sbjct: 109 KALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152


>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
           gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
           [Brassica oleracea] gi|353526526|ref|YP_004927596.1|
           orf159 (mitochondrion) [Brassica carinata]
           gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
           [Brassica rapa subsp. oleifera]
           gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
           [Brassica juncea] gi|37591072|dbj|BAC98874.1|
           hypothetical protein [Brassica napus]
           gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
           oleifera] gi|335354918|gb|AEH43473.1| orf159 [Brassica
           oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
           carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
           juncea] gi|339511333|emb|CBX48388.1| unnamed protein
           product [Brassica napus]
          Length = 159

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = +1

Query: 262 KPLH*GEQKRKDEYVLDSRIHSRPDPPWNLRNLLKHYRRGLVLL 393
           K L  GE+K +DEY LDSRIHSRPDP WN RNL KH R+GLV++
Sbjct: 109 KALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152


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