BLASTX nr result

ID: Zingiber24_contig00037131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00037131
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT06866.1| Transcription factor MYB48 [Aegilops tauschii]          58   1e-06

>gb|EMT06866.1| Transcription factor MYB48 [Aegilops tauschii]
          Length = 240

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
 Frame = -3

Query: 416 IKNYWRTHYKKNKVPSKNMERARTXXXXXXXXXXXXXXXXQIRYLDCNSHFGDKEDMGQQ 237
           IKNYWRTH+KK K  SKN+ERAR                 Q    D  +   D  DM + 
Sbjct: 105 IKNYWRTHFKKGKPSSKNIERARARFLKQRREIMQGHHEHQRDDDDDLAMMRDMADMDEF 164

Query: 236 IEQEVAYLHM----LQDGGSSTDNGGIALQAGDEYGSPGLVMEEYDGGLWGSLWNLDDV 72
           ++ +   + M    L DGG           A  + GS G +     G  WGSLWNLDDV
Sbjct: 165 LQYDHHPMSMSAYFLLDGGDG---------AASDAGSSGEITT--CGATWGSLWNLDDV 212


Top