BLASTX nr result

ID: Zingiber24_contig00036979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036979
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp....    47   6e-08

>ref|YP_588284.1| hypothetical protein ZeamMp020 [Zea mays subsp. mays]
           gi|94502700|ref|YP_588308.1| hypothetical protein
           ZeamMp046 [Zea mays subsp. mays]
           gi|40795138|gb|AAR91182.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795139|gb|AAR91183.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 47.0 bits (110), Expect(2) = 6e-08
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -3

Query: 189 GIRSKLAFLFDHFDRGGWIKWTKKGDGFQSKRWV 88
           G +  L  LF HF RGGWIKW K+   FQSKRWV
Sbjct: 7   GNKKHLKCLFYHFYRGGWIKWAKQTHIFQSKRWV 40



 Score = 35.4 bits (80), Expect(2) = 6e-08
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = -1

Query: 107 SSRKDGFSS*QRKKNLENALINPFVEPAVCIVSDP 3
           S R   FSS QRK +LENA  NPFV P  CIVSDP
Sbjct: 36  SKRWVPFSSRQRKNHLENA-PNPFVGP--CIVSDP 67


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