BLASTX nr result

ID: Zingiber24_contig00036945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036945
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006586939.1| PREDICTED: DDB1- and CUL4-associated factor ...    57   3e-06
ref|XP_004228334.1| PREDICTED: uncharacterized protein LOC101252...    57   3e-06
gb|EXB83247.1| DDB1- and CUL4-associated factor 4 [Morus notabilis]    56   4e-06
ref|XP_006341894.1| PREDICTED: DDB1- and CUL4-associated factor ...    56   4e-06
ref|XP_006597751.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   1e-05

>ref|XP_006586939.1| PREDICTED: DDB1- and CUL4-associated factor 4-like [Glycine max]
          Length = 514

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 135 MTLPKDIPGFYYDSEKNRYFPTKGPIPG 218
           M  PKD+PGFYYDSEK+RYFP KGPIPG
Sbjct: 1   MPQPKDLPGFYYDSEKSRYFPIKGPIPG 28


>ref|XP_004228334.1| PREDICTED: uncharacterized protein LOC101252105 [Solanum
           lycopersicum]
          Length = 496

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 31/58 (53%)
 Frame = +3

Query: 141 LPKDIPGFYYDSEKNRYFPTKGPIPGXXXXXXXXXXXXXXXXXXNGKLSSPDQDYLIH 314
           +PK++PGFYYD+EKNRYFP KGPIPG                   GK      + L+H
Sbjct: 1   MPKELPGFYYDAEKNRYFPIKGPIPGSSKKRKSPSPIVSTKERDKGKCMKSGSNNLLH 58


>gb|EXB83247.1| DDB1- and CUL4-associated factor 4 [Morus notabilis]
          Length = 459

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +3

Query: 141 LPKDIPGFYYDSEKNRYFPTKGPIPG 218
           +P+D+PGFYYD+EKNRYFP KGPIPG
Sbjct: 1   MPRDLPGFYYDAEKNRYFPIKGPIPG 26


>ref|XP_006341894.1| PREDICTED: DDB1- and CUL4-associated factor 4-like [Solanum
           tuberosum]
          Length = 496

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/58 (43%), Positives = 31/58 (53%)
 Frame = +3

Query: 141 LPKDIPGFYYDSEKNRYFPTKGPIPGXXXXXXXXXXXXXXXXXXNGKLSSPDQDYLIH 314
           +PK++PGFYYD+EKNRYFP KGPIPG                   GK      + L+H
Sbjct: 1   MPKELPGFYYDAEKNRYFPIKGPIPGSSKKRKSPSPIVSTKERDKGKCMKSRSNKLLH 58


>ref|XP_006597751.1| PREDICTED: DDB1- and CUL4-associated factor 4-like [Glycine max]
          Length = 514

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +3

Query: 135 MTLPKDIPGFYYDSEKNRYFPTKGPIPG 218
           M  PK++PGFYYD EKNRYFP KGPIPG
Sbjct: 1   MPQPKELPGFYYDPEKNRYFPIKGPIPG 28


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