BLASTX nr result
ID: Zingiber24_contig00036785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00036785
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Popu... 67 3e-09
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera] 65 9e-09
gb|EOY27563.1| Pentatricopeptide repeat superfamily protein [The... 65 1e-08
gb|EOY27561.1| Pentatricopeptide repeat (PPR-like) superfamily p... 65 1e-08
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,... 64 2e-08
ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group] g... 64 3e-08
gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japo... 64 3e-08
ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citr... 61 1e-07
gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays] 60 2e-07
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [S... 59 5e-07
ref|XP_006663591.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
gb|ESW11628.1| hypothetical protein PHAVU_008G046300g [Phaseolus... 58 1e-06
ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 57 2e-06
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223... 57 2e-06
ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
>ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Populus trichocarpa]
gi|550322786|gb|EEF06503.2| hypothetical protein
POPTR_0015s15360g [Populus trichocarpa]
Length = 594
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF +KLLD+DQN DR+T AF ACYE+ +Y+ S+ SERISKG
Sbjct: 538 LCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVSDLSERISKG 592
>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SEG++D A LF +KLLD++ N +R+T + F+N CYE+ +Y SE SERI +G
Sbjct: 652 LCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEG 706
>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SEG++D A LF +KLLD++ N +R+T + F+N CYE+ +Y SE SERI +G
Sbjct: 652 LCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEG 706
>gb|EOY27563.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 738
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF ++LLD+D+N DR+T AF+ ACYET +++ S+ +ERISKG
Sbjct: 682 LCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACYETDKFALVSDLNERISKG 736
>gb|EOY27561.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 692
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF ++LLD+D+N DR+T AF+ ACYET +++ S+ +ERISKG
Sbjct: 636 LCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACYETDKFALVSDLNERISKG 690
>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 712
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF +KLLD+D N DRIT AF ACYE+ +++ S+ SERISKG
Sbjct: 656 LCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERISKG 710
>ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa
Japonica Group]
Length = 671
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISK 73
LS+ G VDAA LF+ K+LDED D T F+N+CYE RY+ ASE SE+ SK
Sbjct: 609 LSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSK 662
>gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISK 73
LS+ G VDAA LF+ K+LDED D T F+N+CYE RY+ ASE SE+ SK
Sbjct: 501 LSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSK 554
>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Fragaria vesca subsp. vesca]
Length = 705
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L E +V A LF +KL+D+DQN DR+T AF ACYE+ +Y+ S+ +ERISKG
Sbjct: 649 LCCEKKVGIAALFFHKLVDKDQNVDRVTLQAFTTACYESNKYALLSDLTERISKG 703
>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Solanum tuberosum]
gi|565393841|ref|XP_006362579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Solanum tuberosum]
gi|565393843|ref|XP_006362580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Solanum tuberosum]
Length = 716
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISK 73
L SE VD A LF +KLLD+ Q+ DR+T AF++ACYE+ Y S +ERI+K
Sbjct: 655 LCSEKNVDVAALFFHKLLDKQQSVDRVTLAAFMSACYESNNYDLVSSMNERITK 708
>ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citrus clementina]
gi|557551319|gb|ESR61948.1| hypothetical protein
CICLE_v10014445mg [Citrus clementina]
Length = 707
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF +KLLD+DQN DR++ A NACYE+ +Y+ S+ S+RI++G
Sbjct: 651 LCSEKRVGMAALFFHKLLDKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 705
>gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKGRINF- 58
LS+ G +DAA LF+ +LD+ D T +F+N+CYE+ RY+ ASE SE+ISK F
Sbjct: 609 LSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKRISGFK 668
Query: 57 VKDISVI 37
KD +VI
Sbjct: 669 KKDTAVI 675
>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Solanum lycopersicum]
Length = 716
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISK 73
L SE V+ A LF +KLLD+ Q+ DR+T AF++ACYE+ +Y S +ERI+K
Sbjct: 655 LCSEKNVNVAALFFHKLLDKQQSVDRVTLAAFMSACYESNKYDLVSSMNERITK 708
>ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein
SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKGRINF- 58
LS+ +DAA LF+ +LD+ D T +F+N+CYE+ RY+ ASE SE+ISK F
Sbjct: 609 LSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKRISGFK 668
Query: 57 VKDISVI 37
KD++VI
Sbjct: 669 KKDVAVI 675
>ref|XP_006663591.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Oryza brachyantha]
Length = 664
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKGRINFV 55
LS+ G VDAA LF+ ++L+ D D T F+N+CYE RY+ SE SE+ SK + F
Sbjct: 595 LSALGNVDAASLFLKEVLERDCAVDHATYTGFINSCYENNRYALTSEMSEKFSKKSLAFK 654
Query: 54 KDISVIT 34
K ++ T
Sbjct: 655 KRDNLAT 661
>ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Citrus sinensis]
Length = 707
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L SE +V A LF +KLL +DQN DR++ A NACYE+ +Y+ S+ S+RI++G
Sbjct: 651 LCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFSDLSQRIAEG 705
>gb|ESW11628.1| hypothetical protein PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012768|gb|ESW11629.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
Length = 698
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISK 73
LSSE +V A LF KLLD D + DR+T AF+ ACYE+ Y+ S+ S RI K
Sbjct: 636 LSSEKKVGMAALFFRKLLDMDPHVDRVTLAAFMTACYESSNYALVSDLSSRIYK 689
>ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19890-like [Setaria italica]
Length = 679
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKGRINF- 58
LS+ +DAA LF+ +L++ D +T +F+N+CY + RY+ ASE SE+ISK NF
Sbjct: 612 LSAADNLDAASLFLKNVLEKHYTVDHLTYTSFINSCYNSNRYALASEISEKISKRISNFH 671
Query: 57 VKDISVI 37
KD + I
Sbjct: 672 QKDATTI 678
>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L E +V A LF +KLLD++ N DR+T AF AC E+ +Y+ S+ SERISKG
Sbjct: 1259 LCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKG 1313
>ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -1
Query: 234 LSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSASEFSERISKG 70
L E +V A LF +KLLD++ N DR+T AF AC E+ +Y+ S+ SERISKG
Sbjct: 672 LCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKG 726