BLASTX nr result
ID: Zingiber24_contig00036769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00036769
(409 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 117 2e-24
ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 115 6e-24
ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 113 3e-23
ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [S... 112 5e-23
gb|AFW70669.1| putative DEAD-box ATP-dependent RNA helicase fami... 112 7e-23
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 110 3e-22
ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 110 3e-22
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 109 3e-22
ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 107 1e-21
ref|XP_003571087.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 107 1e-21
gb|EMT32669.1| DEAD-box ATP-dependent RNA helicase 41 [Aegilops ... 107 2e-21
gb|EMS56659.1| DEAD-box ATP-dependent RNA helicase 41 [Triticum ... 106 3e-21
gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japo... 106 4e-21
sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 105 8e-21
gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indi... 105 8e-21
ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 104 1e-20
ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 103 2e-20
ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 100 2e-19
ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 100 2e-19
ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citr... 100 2e-19
>ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
[Solanum tuberosum] gi|565375350|ref|XP_006354194.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
isoform X2 [Solanum tuberosum]
Length = 527
Score = 117 bits (292), Expect = 2e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = -3
Query: 248 ECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQNPRL 69
E VK+RC +QREALP EP CVICGRYGEYICD+TD+DICS+ECK ILL+R ++ P
Sbjct: 15 EDDVKERCWDQREALPGEPRCVICGRYGEYICDETDDDICSLECKGILLSRLAKSRQPTA 74
Query: 68 NPAPLVKIPTNDECFYVKGNNK 3
P P VK+P DEC+YV+ N+K
Sbjct: 75 RPCP-VKLPATDECYYVRDNDK 95
>ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Solanum
lycopersicum]
Length = 527
Score = 115 bits (288), Expect = 6e-24
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = -3
Query: 248 ECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQNPRL 69
E VK+RC +QREALP EP C++CGRYGEYICD+TD+DICS+ECK ILL+R ++ P
Sbjct: 15 EDDVKERCWDQREALPGEPRCIVCGRYGEYICDETDDDICSLECKGILLSRLGESRQPTA 74
Query: 68 NPAPLVKIPTNDECFYVKGNNK 3
P P VK+P DEC+YV+ N K
Sbjct: 75 RPCP-VKLPATDECYYVRDNGK 95
>ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
[Setaria italica] gi|514708419|ref|XP_004951532.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
isoform X2 [Setaria italica]
Length = 539
Score = 113 bits (282), Expect = 3e-23
Identities = 54/102 (52%), Positives = 67/102 (65%)
Frame = -3
Query: 311 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 132
DN + S D+N + ++ PVK+RC EQREALP EP CV+CGRYGEYICD+TD+DI
Sbjct: 10 DNLLVSASDNN-------ELQDLPVKERCFEQREALPGEPRCVVCGRYGEYICDETDDDI 62
Query: 131 CSIECKTILLARHENTQNPRLNPAPLVKIPTNDECFYVKGNN 6
CS+ECKTILLAR + A V +P DE F +K N
Sbjct: 63 CSVECKTILLARVAAKTKSAVKAAKRVNLPLGDESFCIKDTN 104
>ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [Sorghum bicolor]
gi|241933334|gb|EES06479.1| hypothetical protein
SORBIDRAFT_04g006980 [Sorghum bicolor]
Length = 539
Score = 112 bits (280), Expect = 5e-23
Identities = 51/84 (60%), Positives = 60/84 (71%)
Frame = -3
Query: 257 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQN 78
+ + PVK+RC EQREALP EP CV+CGRYGEYICDQTD+DICS+ECKTILLAR
Sbjct: 21 ELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDDDICSVECKTILLARIAAKTK 80
Query: 77 PRLNPAPLVKIPTNDECFYVKGNN 6
P + A V +P DE F +K N
Sbjct: 81 PAVKAAKRVNLPLGDESFCIKDIN 104
>gb|AFW70669.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
1 [Zea mays] gi|413936119|gb|AFW70670.1| putative
DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 539
Score = 112 bits (279), Expect = 7e-23
Identities = 54/102 (52%), Positives = 67/102 (65%)
Frame = -3
Query: 311 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 132
D+ + S D+N + + PVK+RC EQREALP EP CV+CGRYGEYICDQTD+DI
Sbjct: 10 DSFVVSSSDNN-------ELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDDDI 62
Query: 131 CSIECKTILLARHENTQNPRLNPAPLVKIPTNDECFYVKGNN 6
CS+ECKTILL+R P + A V +P DE F +K N
Sbjct: 63 CSVECKTILLSRIVAKTKPAVKAAKRVNLPLGDESFCIKDIN 104
>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
sativus]
Length = 532
Score = 110 bits (274), Expect = 3e-22
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = -3
Query: 263 ACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENT 84
A D+ E PVK +C EQREA P EP CV+CGRYGEYICD+TD+D+CS+ECK +L + NT
Sbjct: 19 ADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANT 78
Query: 83 QNPRLNPAPLVKIPTNDECFYVKGNN 6
P + AP ++P DECFYVK +N
Sbjct: 79 MAP--DKAPSKRLPAADECFYVKESN 102
>ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
sativus]
Length = 532
Score = 110 bits (274), Expect = 3e-22
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = -3
Query: 263 ACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENT 84
A D+ E PVK +C EQREA P EP CV+CGRYGEYICD+TD+D+CS+ECK +L + NT
Sbjct: 19 ADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANT 78
Query: 83 QNPRLNPAPLVKIPTNDECFYVKGNN 6
P + AP ++P DECFYVK +N
Sbjct: 79 MAP--DKAPSKRLPAADECFYVKESN 102
>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
vinifera]
Length = 540
Score = 109 bits (273), Expect = 3e-22
Identities = 54/102 (52%), Positives = 67/102 (65%)
Frame = -3
Query: 320 NMEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTD 141
N N + D+ GT D VK+RC +QREALP EP CVICGRYGEYICD+TD
Sbjct: 8 NQGKNSVELTDDNEGTADG--------VKERCWDQREALPGEPKCVICGRYGEYICDETD 59
Query: 140 EDICSIECKTILLARHENTQNPRLNPAPLVKIPTNDECFYVK 15
+DICS+ECK LL R ++ P + P P ++PT DECFYV+
Sbjct: 60 DDICSLECKQTLLCRVAKSRLPVVLPPP-KRLPTTDECFYVR 100
>ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Oryza
brachyantha]
Length = 539
Score = 107 bits (268), Expect = 1e-21
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = -3
Query: 257 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQN 78
+ E P+K+RC EQREAL EP CVICGRYGEYICDQTD+DICS+ECKTILL+R
Sbjct: 21 ELEESPIKERCFEQREALLGEPRCVICGRYGEYICDQTDDDICSVECKTILLSRLSAETK 80
Query: 77 PRLNPAPLVKIPTNDECFYVKGNN 6
P + V +P DE F ++ N
Sbjct: 81 PAVKAVKRVNLPVGDESFCIRDKN 104
>ref|XP_003571087.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
[Brachypodium distachyon]
Length = 634
Score = 107 bits (268), Expect = 1e-21
Identities = 51/88 (57%), Positives = 60/88 (68%)
Frame = -3
Query: 269 DPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHE 90
D + + + VK+RC EQREALP EP CVICGRYGEYICDQTD+DICS+ECKT LLAR
Sbjct: 112 DASKELEDLRVKERCIEQREALPGEPRCVICGRYGEYICDQTDDDICSVECKTSLLARIA 171
Query: 89 NTQNPRLNPAPLVKIPTNDECFYVKGNN 6
P + V +P DE F V+ NN
Sbjct: 172 AKTKPPVKAPVRVDVPFGDESFCVRDNN 199
>gb|EMT32669.1| DEAD-box ATP-dependent RNA helicase 41 [Aegilops tauschii]
Length = 541
Score = 107 bits (266), Expect = 2e-21
Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = -3
Query: 311 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 132
DN ++ D N + VK+RC EQREALP EP CVICGRYGEYICDQTD+DI
Sbjct: 10 DNLVSPSDDRN-----ELQVEDLRVKERCFEQREALPGEPRCVICGRYGEYICDQTDDDI 64
Query: 131 CSIECKTILLAR-HENTQNPRLNPAPLVKIPTNDECFYVKGNN 6
CS+ECKT LLAR T+ P PA VK+P DE F V+ NN
Sbjct: 65 CSVECKTALLARIAAETKIPVKAPA-RVKVPFGDESFCVRDNN 106
>gb|EMS56659.1| DEAD-box ATP-dependent RNA helicase 41 [Triticum urartu]
Length = 487
Score = 106 bits (265), Expect = 3e-21
Identities = 57/103 (55%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = -3
Query: 311 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 132
DN ++ D N + VK+RC EQREALP EP CVICGRYGEYICDQTD+DI
Sbjct: 10 DNLVSPSDDRN-----ELQVEDLRVKERCFEQREALPGEPRCVICGRYGEYICDQTDDDI 64
Query: 131 CSIECKTILLAR-HENTQNPRLNPAPLVKIPTNDECFYVKGNN 6
CS+ECKT LLAR T+ P PA +K+P DE F V+ NN
Sbjct: 65 CSVECKTALLARIAAETKIPVKAPA-RIKVPFGDESFCVRDNN 106
>gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japonica Group]
Length = 648
Score = 106 bits (264), Expect = 4e-21
Identities = 61/131 (46%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Frame = -3
Query: 374 AQLTYFIFSL-----KSS*L*VVNMEDNQIA---SLMDHNGTLDPACDTRECPVKQRCQE 219
+QL +F F L SS + + E+N A S NG + E VK+RC E
Sbjct: 24 SQLKFFSFLLCSFVDLSSNINRMEQEENHSADHLSAQPGNGN-----ELEESSVKERCFE 78
Query: 218 QREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQNPRLNPAPLVKIPT 39
QREAL EP CVICGRYGEYICDQTD+DICS+ECKTILL++ P + A V +P
Sbjct: 79 QREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETRPVVKAAKRVNLPV 138
Query: 38 NDECFYVKGNN 6
DE F ++ N
Sbjct: 139 GDESFCIRDEN 149
>sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 41
gi|46390396|dbj|BAD15860.1| putative DEAD box [Oryza
sativa Japonica Group] gi|215701515|dbj|BAG92939.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215767715|dbj|BAG99943.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 536
Score = 105 bits (261), Expect = 8e-21
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = -3
Query: 257 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQN 78
+ E VK+RC EQREAL EP CVICGRYGEYICDQTD+DICS+ECKTILL++
Sbjct: 21 ELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETR 80
Query: 77 PRLNPAPLVKIPTNDECFYVKGNN 6
P + A V +P DE F ++ N
Sbjct: 81 PVVKAAKRVNLPVGDESFCIRDEN 104
>gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indica Group]
Length = 648
Score = 105 bits (261), Expect = 8e-21
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = -3
Query: 257 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQN 78
+ E VK+RC EQREAL EP CVICGRYGEYICDQTD+DICS+ECKTILL++
Sbjct: 66 ELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETR 125
Query: 77 PRLNPAPLVKIPTNDECFYVKGNN 6
P + A V +P DE F ++ N
Sbjct: 126 PVVKAAKRVNLPVGDESFCIRDEN 149
>ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 526
Score = 104 bits (260), Expect = 1e-20
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = -3
Query: 287 DHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTI 108
+ +G + D VK+R ++QRE LP EP CVICGRYGEYICDQTD+DICS+ECK
Sbjct: 5 NQDGQCKSSTDDVNDEVKERSRDQREPLPGEPKCVICGRYGEYICDQTDDDICSLECKQT 64
Query: 107 LLARHENTQNPRLNPAPLVKIPTNDECFYVK 15
LL+R N+Q ++ P ++P NDECFYV+
Sbjct: 65 LLSRVTNSQ-LAVSQCPPKRLPANDECFYVR 94
>ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 517
Score = 103 bits (258), Expect = 2e-20
Identities = 47/75 (62%), Positives = 59/75 (78%)
Frame = -3
Query: 239 VKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHENTQNPRLNPA 60
VK+R ++QRE LP EP CVICGRYGEYICDQTD+DICS+ECK LL+R N+Q ++
Sbjct: 12 VKERSRDQREPLPGEPKCVICGRYGEYICDQTDDDICSLECKQTLLSRVTNSQ-LAVSQC 70
Query: 59 PLVKIPTNDECFYVK 15
P ++P NDECFYV+
Sbjct: 71 PPKRLPANDECFYVR 85
>ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X2
[Citrus sinensis]
Length = 533
Score = 100 bits (249), Expect = 2e-19
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = -3
Query: 317 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 138
M +NQ ++ +G D D VK+ ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1 MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55
Query: 137 DICSIECKTILLARHENTQNPR--LNPAPLVKIPTNDECFYVKGNNK 3
D+CS+ECK LL R N + P P ++P DECFYV+ +++
Sbjct: 56 DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDE 102
>ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
[Citrus sinensis]
Length = 533
Score = 100 bits (249), Expect = 2e-19
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = -3
Query: 317 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 138
M +NQ ++ +G D D VK+ ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1 MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55
Query: 137 DICSIECKTILLARHENTQNPR--LNPAPLVKIPTNDECFYVKGNNK 3
D+CS+ECK LL R N + P P ++P DECFYV+ +++
Sbjct: 56 DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDE 102
>ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citrus clementina]
gi|557549483|gb|ESR60112.1| hypothetical protein
CICLE_v10017882mg [Citrus clementina]
Length = 533
Score = 100 bits (249), Expect = 2e-19
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = -3
Query: 317 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 138
M +NQ ++ +G D D VK+ ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1 MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55
Query: 137 DICSIECKTILLARHENTQNPR--LNPAPLVKIPTNDECFYVKGNNK 3
D+CS+ECK LL R N + P P ++P DECFYV+ +++
Sbjct: 56 DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDE 102