BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036743
         (274 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22850.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protei...    68   1e-09
ref|XP_002314968.2| pentatricopeptide repeat-containing family p...    65   1e-08
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutr...    60   2e-07
ref|NP_190450.1| pentatricopeptide repeat-containing protein [Ar...    60   2e-07
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Caps...    59   9e-07
ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [A...    58   1e-06
ref|XP_002875927.1| pentatricopeptide repeat-containing protein ...    58   1e-06
gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]      56   6e-06
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr...    55   7e-06

>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           M+L EG SLLLKV K ++  VL+ N +P+ + E     S LKEADVL+ LK E +I +AL
Sbjct: 1   MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60

Query: 51  DFFRHVAGLNGFRHTPL 1
           ++F+ +A    F+HTPL
Sbjct: 61  EYFKSIANSKSFKHTPL 77


>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           M+L EG SLLLKV K ++  VL+ N +P+ + E     S LKEADVL+ LK E +I +AL
Sbjct: 1   MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60

Query: 51  DFFRHVAGLNGFRHTPL 1
           ++F+ +A    F+HTPL
Sbjct: 61  EYFKSIANSKSFKHTPL 77


>gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 664

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMI--PDTEQEKGSDVSKLKEADVLRHLKLERNIAV 58
           MYL EGRSLLLKV K ++  +L  N +  P  E +   + ++L+E+ VL  LK E N+++
Sbjct: 1   MYLKEGRSLLLKVQKPSIPFILNTNPLLKPHKESQTEPNQTQLEESQVLSRLKQEPNMSL 60

Query: 57  ALDFFRHVAGLNGFRHTP 4
           AL++F+ +A  N F+HTP
Sbjct: 61  ALNYFKSIANSNSFKHTP 78


>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329900|gb|EEF01139.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 662

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVL-TLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVA 55
           MYL EG SLLLK  K  V  VL T+N +    Q +  D++ LKE++VL  LK E NI +A
Sbjct: 1   MYLKEGCSLLLKKQKPLVPFVLNTINPL----QNEQKDLNLLKESEVLNKLKNEPNILLA 56

Query: 54  LDFFRHVAGLNGFRHTPL 1
           L FF+ +A  N F+HTPL
Sbjct: 57  LHFFKSIANSNSFKHTPL 74


>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Solanum tuberosum]
          Length = 663

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEK---GSDVSKLKEADVLRHLKLERNIA 61
           MYL EG SLLLKV K ++  +L  N+ P    ++   G +  +LKE+DVL+ LK E NI+
Sbjct: 1   MYLKEGCSLLLKVHKKSLPLILN-NVNPSFNVDQLNGGKNPVELKESDVLKRLKYEENIS 59

Query: 60  VALDFFRHVAGLNGFRHTPL 1
            A+++F+ VA    F+HTPL
Sbjct: 60  NAIEYFKWVANSTFFKHTPL 79


>ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutrema salsugineum]
           gi|557105334|gb|ESQ45668.1| hypothetical protein
           EUTSA_v10010184mg [Eutrema salsugineum]
          Length = 650

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EG SLLLKV K  +  VL  N+      E  +  +++KE +V++ L+ E  + +AL
Sbjct: 1   MYLKEGCSLLLKVQKPIIPFVLNTNLTGKLLLESPNPATEIKEFEVVKRLRQESCVPLAL 60

Query: 51  DFFRHVAGLNGFRHTPL 1
            +F+ +A  N F+HTPL
Sbjct: 61  QYFKSIANSNLFKHTPL 77


>ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183419|sp|Q9M302.1|PP270_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48810 gi|7576219|emb|CAB87909.1| putative protein
           [Arabidopsis thaliana] gi|332644937|gb|AEE78458.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 48/77 (62%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EG SLLLKV K  +  VL  N+  +    +  + +++KE DV++ L+ E  + +AL
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLAL 60

Query: 51  DFFRHVAGLNGFRHTPL 1
            FF+ +A  N F+HTPL
Sbjct: 61  HFFKSIANSNLFKHTPL 77


>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EGRSLL+K+ K  +  VL  N I +        +  L+E+DVL+ LK +RN++  L
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58

Query: 51  DFFRHVAGLNGFRHT 7
            FF  +A  N F+HT
Sbjct: 59  GFFSAIANSNAFQHT 73


>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EGRSLL+K+ K  +  VL  N I +        +  L+E+DVL+ LK +RN++  L
Sbjct: 1   MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58

Query: 51  DFFRHVAGLNGFRHT 7
            FF  +A  N F+HT
Sbjct: 59  GFFSAIANSNAFQHT 73


>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Solanum lycopersicum]
          Length = 663

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLT-LNMIPDTEQEKGSDVS-KLKEADVLRHLKLERNIAV 58
           MYL +G SLLLKV K ++  +L  +N   + +Q  G     +LKE DVL+ LK + NI+ 
Sbjct: 1   MYLKDGCSLLLKVQKRSLPLILNNVNASFNVDQFNGGKTPVELKEFDVLKRLKYDENISN 60

Query: 57  ALDFFRHVAGLNGFRHTPL 1
           AL++F+ VA    F+HTPL
Sbjct: 61  ALEYFKWVANSTFFKHTPL 79


>ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Capsella rubella]
           gi|482559448|gb|EOA23639.1| hypothetical protein
           CARUB_v10016837mg [Capsella rubella]
          Length = 634

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPD--TEQEKGSDVSKLKEADVLRHLKLERNIAV 58
           MYL EG SLLLKV K  +  VL  N+  +  TE  K  ++   KE+DV++ L+ E  + +
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLSVNLLTEAPKHDEI---KESDVVKRLRQESCVPL 57

Query: 57  ALDFFRHVAGLNGFRHTP 4
           AL FF+ VA  N F+HTP
Sbjct: 58  ALHFFKSVANSNLFKHTP 75


>ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [Amborella trichopoda]
           gi|548844110|gb|ERN03736.1| hypothetical protein
           AMTR_s00078p00041370 [Amborella trichopoda]
          Length = 661

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           M L EG +LLLKV + +V+ +L +N      +E    V+  KE +V R LK E ++ VAL
Sbjct: 1   MVLKEGSTLLLKVRRPSVSVLLNMNGRSGDNKESKGSVAVPKEFEVFRRLKHEEDVNVAL 60

Query: 51  DFFRHVAGLNGFRHTPL 1
           ++F+ +    GF+HT L
Sbjct: 61  EYFKFITNSKGFKHTSL 77


>ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321765|gb|EFH52186.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EG SLLLKV K  +  VL  N+  +   E  +  +++KE+ VL+ L+ E  + +AL
Sbjct: 1   MYLKEGCSLLLKVQKPLIPFVLNTNLNVNLLTESPNH-AEIKESAVLKRLRQESCVPLAL 59

Query: 51  DFFRHVAGLNGFRHTPL 1
            FF+ +A  N F+HTPL
Sbjct: 60  HFFKSIANSNLFKHTPL 76


>gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]
          Length = 653

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL EGRSL LK+ KS +     L                 KE+DVL+ L  E ++A+A+
Sbjct: 1   MYLKEGRSLALKLRKSPMAKPFFLLNTTKPIPNPNDSEPVFKESDVLKRLNQEPDLALAM 60

Query: 51  DFFRHVAGLNGFRHTPL 1
           DFF+ ++    F HTPL
Sbjct: 61  DFFKSISNSGAFSHTPL 77


>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Citrus sinensis]
          Length = 661

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL +G SL+LK  K ++  VL  N IP++  ++    + + E  V + L+ E NIA AL
Sbjct: 1   MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59

Query: 51  DFFRHVAGLNGFRHTPL 1
           ++F+ +A  N F+HT L
Sbjct: 60  NYFKSIANSNTFKHTAL 76


>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
           gi|557521203|gb|ESR32570.1| hypothetical protein
           CICLE_v10004501mg [Citrus clementina]
          Length = 661

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = -2

Query: 231 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEQEKGSDVSKLKEADVLRHLKLERNIAVAL 52
           MYL +G SL+LK  K ++  VL  N IP++  ++    + + E  V + L+ E NIA AL
Sbjct: 1   MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59

Query: 51  DFFRHVAGLNGFRHTPL 1
           ++F+ +A  N F+HT L
Sbjct: 60  NYFKSIANSNTFKHTAL 76