BLASTX nr result

ID: Zingiber24_contig00036626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036626
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW27923.1| hypothetical protein PHAVU_003G244300g [Phaseolus...    52   1e-06
gb|AFK37699.1| unknown [Lotus japonicus]                               49   6e-06
emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinife...    47   8e-06

>gb|ESW27923.1| hypothetical protein PHAVU_003G244300g [Phaseolus vulgaris]
           gi|561029284|gb|ESW27924.1| hypothetical protein
           PHAVU_003G244300g [Phaseolus vulgaris]
          Length = 186

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = -3

Query: 193 NFEFAVGGGNSTIDADQLFFKGRLLPLKDSRHGQRPRAVTTLREELL----SPTAGSGDW 26
           +FEF+V    S + AD+LFFKGRLLP KD++     RA TTLREELL        G  D+
Sbjct: 58  DFEFSVTN-YSMMSADELFFKGRLLPFKDTK-----RATTTLREELLVHDDDDDEGYQDF 111

Query: 25  PERPLRGS 2
             RP +GS
Sbjct: 112 SLRPPKGS 119



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
 Frame = -2

Query: 341 MACINMQLSADRQALCGVXXXXXXXPMSPRVSFSSDF------------XAGRCAAPATG 198
           MAC+ M  S  +    G        P+SPR+SFS+DF             A R  APA  
Sbjct: 1   MACLEMYNSEHK----GRHHHHHCAPVSPRISFSNDFVDAQQATKQEHSSASRSEAPAVS 56

Query: 197 SE 192
           S+
Sbjct: 57  SD 58


>gb|AFK37699.1| unknown [Lotus japonicus]
          Length = 176

 Score = 48.5 bits (114), Expect(2) = 6e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = -3

Query: 193 NFEFAVGGGNSTIDADQLFFKGRLLPLKDS--RHGQRPRAVTTLREELLS 50
           +FEF+     S + AD+LF KGRLLP KDS   H Q  RA TTL+EELL+
Sbjct: 54  DFEFSTTN-YSMMSADELFSKGRLLPYKDSCNNHNQMQRATTTLKEELLN 102



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 341 MACINMQLSADRQALCGVXXXXXXXPMSPRVSFSSDF 231
           MAC++M  S  +Q            PMSPR+SFS+DF
Sbjct: 1   MACLDMYNSERKQG--------HHHPMSPRISFSNDF 29


>emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinifera]
           gi|296082431|emb|CBI21436.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score = 46.6 bits (109), Expect(2) = 8e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 193 NFEFAVGGGNSTIDADQLFFKGRLLPLKD--SRHGQRPRAVTTLREELLSPTAGSGDWPE 20
           +FEF+V    S + AD+LFFKGRLLP KD  + H Q+    TTLREELL       +   
Sbjct: 49  DFEFSVTN-YSMMSADELFFKGRLLPFKDNCTNHSQK----TTLREELL--VVDEEEVSR 101

Query: 19  RPLRGS 2
           RP +GS
Sbjct: 102 RPPKGS 107



 Score = 28.5 bits (62), Expect(2) = 8e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 341 MACINMQLSADRQALCGVXXXXXXXPMSPRVSFSSDF 231
           MAC++M  +++ + LC         PMSPR+SFS+DF
Sbjct: 1   MACLDMY-NSEHKGLCA--------PMSPRISFSNDF 28


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