BLASTX nr result
ID: Zingiber24_contig00036600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00036600
(570 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indi... 79 8e-13
ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group] g... 79 1e-12
gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japo... 79 1e-12
ref|XP_006643763.1| PREDICTED: putative pentatricopeptide repeat... 75 1e-11
ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|... 74 3e-11
ref|XP_006849942.1| hypothetical protein AMTR_s00022p00129420 [A... 72 8e-11
ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [S... 72 1e-10
ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|... 70 3e-10
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,... 69 1e-09
gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily p... 68 1e-09
ref|XP_004488749.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 68 1e-09
ref|XP_006464901.1| PREDICTED: putative pentatricopeptide repeat... 68 2e-09
ref|XP_006451781.1| hypothetical protein CICLE_v10007960mg [Citr... 68 2e-09
gb|EMT24172.1| Putative pentatricopeptide repeat-containing prot... 67 4e-09
gb|EMS48923.1| hypothetical protein TRIUR3_08085 [Triticum urartu] 67 4e-09
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] 67 4e-09
dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 5e-09
emb|CBI20261.3| unnamed protein product [Vitis vinifera] 66 5e-09
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat... 66 5e-09
>gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 79.0 bits (193), Expect = 8e-13
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
I KILKS D S L+ L++ ++ ED+V+ VLQ+ RS+WK+ALSFFKWA+ Y HG
Sbjct: 86 IVKILKSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHG 145
Query: 537 PRAYNEILDIL 569
RAY E+LDIL
Sbjct: 146 SRAYTEMLDIL 156
>ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza
sativa Japonica Group] gi|13872936|dbj|BAB44041.1|
hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa
Japonica Group]
Length = 534
Score = 78.6 bits (192), Expect = 1e-12
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
I KILKS D S L+ L++ ++ ED+V+ VLQ+ RS+WK+ALSFFKWA+ Y HG
Sbjct: 86 IVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHG 145
Query: 537 PRAYNEILDIL 569
RAY E+LDIL
Sbjct: 146 SRAYTEMLDIL 156
>gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 78.6 bits (192), Expect = 1e-12
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
I KILKS D S L+ L++ ++ ED+V+ VLQ+ RS+WK+ALSFFKWA+ Y HG
Sbjct: 66 IVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHG 125
Query: 537 PRAYNEILDIL 569
RAY E+LDIL
Sbjct: 126 SRAYTEMLDIL 136
>ref|XP_006643763.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Oryza brachyantha]
Length = 535
Score = 75.1 bits (183), Expect = 1e-11
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
I KILK + S L+ L++ ++ ED+V+ VLQ++RS+WK+ALSFFKWA++ Y HG
Sbjct: 84 IVKILKPANGESELAEVLNQFADEMDEDVVLKVLQKHRSNWKVALSFFKWAASLPRYAHG 143
Query: 537 PRAYNEILDIL 569
R+Y E+LDIL
Sbjct: 144 SRSYTEMLDIL 154
>ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|gb|ACF79380.1| unknown
[Zea mays] gi|413947420|gb|AFW80069.1| GTP binding
protein [Zea mays]
Length = 535
Score = 73.9 bits (180), Expect = 3e-11
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 357 IQKILKSHDK-SSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLH 533
+ K+LKS ++ LS AL + + + ED++++VLQ+ RS+W++AL+FF WA+T Y H
Sbjct: 83 VLKVLKSTSADNTDLSGALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYAH 142
Query: 534 GPRAYNEILDIL 569
G RAY E+LDIL
Sbjct: 143 GSRAYTEMLDIL 154
>ref|XP_006849942.1| hypothetical protein AMTR_s00022p00129420 [Amborella trichopoda]
gi|548853540|gb|ERN11523.1| hypothetical protein
AMTR_s00022p00129420 [Amborella trichopoda]
Length = 550
Score = 72.4 bits (176), Expect = 8e-11
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
+QK++KS L ALD + +T++LV++VL R+RSDWK AL FF+WAS + NY H
Sbjct: 110 VQKLMKSFQTREELEFALDNSGLIITKELVLVVLHRHRSDWKPALFFFQWASNRGNYSHE 169
Query: 537 PRAYNEILDIL 569
YN ++DIL
Sbjct: 170 SGVYNVMIDIL 180
>ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein
SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 357 IQKILKSHDKSSG-LSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLH 533
+ K+LKS + LS AL + + ED+++ VLQ+ RS+W++AL+FF WA+T Y H
Sbjct: 91 VLKVLKSTSADNADLSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFNWAATLPGYAH 150
Query: 534 GPRAYNEILDIL 569
G RAY E+LDIL
Sbjct: 151 GSRAYTEMLDIL 162
>ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
+ +ILKS D + L AL ++ ED+V+ VLQ+ RS+W++AL FF WA+ Y HG
Sbjct: 86 VLRILKSSDGDTDLGKALHRFAGEMDEDVVLRVLQKQRSNWQVALLFFNWAAGLPAYAHG 145
Query: 537 PRAYNEILDIL 569
PR Y E+LDIL
Sbjct: 146 PRTYTEMLDIL 156
>ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|gb|ACG29615.1| GTP
binding protein [Zea mays]
Length = 535
Score = 70.5 bits (171), Expect = 3e-10
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 357 IQKILKSHDKSSG-LSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLH 533
+ +LKS + LS L + + + ED++++VLQ+ RS+W++AL+FF WA+T Y H
Sbjct: 83 VLNVLKSTSADNADLSGVLHQFMVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYAH 142
Query: 534 GPRAYNEILDIL 569
G RAY E+LDIL
Sbjct: 143 GSRAYTEMLDIL 154
>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 68.6 bits (166), Expect = 1e-09
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +3
Query: 357 IQKILKSHDKSSG--LSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYL 530
+Q +LK++ S + AL +C +TEDL++ VL+R+RSDWK AL FF W S L
Sbjct: 52 VQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKVL 111
Query: 531 HGPRAYNEILDIL 569
G AYNEILDIL
Sbjct: 112 MGSGAYNEILDIL 124
>gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 534
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +3
Query: 357 IQKILKSHDKSS--GLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYL 530
+Q IL +H SS + ALD+C++ +TE L + +++RNRSDWKLA FF+W S +
Sbjct: 80 LQNILNNHRNSSIEEIEQALDQCEVTMTEGLALDLVRRNRSDWKLAHVFFQWVSKKGENS 139
Query: 531 HGPRAYNEILDIL 569
G YNEILD+L
Sbjct: 140 LGFDVYNEILDVL 152
>ref|XP_004488749.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15200-like [Cicer
arietinum]
Length = 503
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +3
Query: 357 IQKILK-SHDK-SSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYL 530
IQ +LK DK + + AL+ CKI +LV+ VLQR+RSDWK A +FFKW S NNY
Sbjct: 75 IQNLLKFRRDKPTQQIEHALNLCKIHPNHELVLEVLQRHRSDWKPAFTFFKWVSKTNNYT 134
Query: 531 HGPRAYNEILDIL 569
YNEIL+IL
Sbjct: 135 PSCHVYNEILNIL 147
>ref|XP_006464901.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Citrus sinensis]
Length = 536
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Frame = +3
Query: 168 SSHFTKNNFCNASISY----PVICSQELLCSSRRYYLGSPSESESI-SLPNPDGLTSVXX 332
++ F+K CN+ S+ P+I Q +S +LG ++ + SL N D +
Sbjct: 27 TTQFSKLQSCNSVTSHKTLIPIINLQAR--NSEFLFLGRIETAQLVHSLANSDEKSEFQR 84
Query: 333 XXXXXXXX-IQKILKSHDKSSG--LSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFK 503
+Q ILK+ S+ + AL++C++ LT+DL+V V+ R R DW+ A +FFK
Sbjct: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
Query: 504 WASTQNNYLHGPRAYNEILDIL 569
W S + +Y G +N ILD+L
Sbjct: 145 WVSREGDYSPGSNVFNAILDVL 166
>ref|XP_006451781.1| hypothetical protein CICLE_v10007960mg [Citrus clementina]
gi|557555007|gb|ESR65021.1| hypothetical protein
CICLE_v10007960mg [Citrus clementina]
Length = 536
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Frame = +3
Query: 168 SSHFTKNNFCNASISY----PVICSQELLCSSRRYYLGSPSESESI-SLPNPDGLTSVXX 332
++ F+K CN+ S+ P+I Q +S +LG ++ + SL N D +
Sbjct: 27 TTQFSKLQSCNSVTSHKTLIPIINLQAR--NSEFLFLGRIETAQLVHSLANSDEKSEFQR 84
Query: 333 XXXXXXXX-IQKILKSHDKSSG--LSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFK 503
+Q ILK+ S+ + AL++C++ LT+DL+V V+ R R DW+ A +FFK
Sbjct: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
Query: 504 WASTQNNYLHGPRAYNEILDIL 569
W S + +Y G +N ILD+L
Sbjct: 145 WVSREGDYSPGSNVFNAILDVL 166
>gb|EMT24172.1| Putative pentatricopeptide repeat-containing protein [Aegilops
tauschii]
Length = 2407
Score = 66.6 bits (161), Expect = 4e-09
Identities = 40/106 (37%), Positives = 59/106 (55%)
Frame = +3
Query: 252 RRYYLGSPSESESISLPNPDGLTSVXXXXXXXXXXIQKILKSHDKSSGLSSALDECKIQL 431
R Y LGSP + +L D L + + ++LKS + L L + ++
Sbjct: 265 RGYVLGSPRLCHTSALE--DSLDA-------RVGEVLRVLKSCAADADLGKDLFQFADEM 315
Query: 432 TEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHGPRAYNEILDIL 569
ED+V+ VLQ+ RS+W++AL FF WA+ +Y HGPR Y E+LDIL
Sbjct: 316 DEDVVLKVLQKQRSNWQVALLFFNWAAGLPSYEHGPRTYTEMLDIL 361
>gb|EMS48923.1| hypothetical protein TRIUR3_08085 [Triticum urartu]
Length = 537
Score = 66.6 bits (161), Expect = 4e-09
Identities = 40/106 (37%), Positives = 59/106 (55%)
Frame = +3
Query: 252 RRYYLGSPSESESISLPNPDGLTSVXXXXXXXXXXIQKILKSHDKSSGLSSALDECKIQL 431
R Y LGSP + +L D L + + ++LKS + L L + ++
Sbjct: 60 RGYVLGSPRLCHTSALE--DSLDA-------RVGEVLRVLKSCAADADLGKDLFQFADEM 110
Query: 432 TEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHGPRAYNEILDIL 569
ED+V+ VLQ+ RS+W++AL FF WA+ +Y HGPR Y E+LDIL
Sbjct: 111 DEDVVLKVLQKQRSNWQVALLFFNWAAGLPSYEHGPRTYTEMLDIL 156
>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 66.6 bits (161), Expect = 4e-09
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Frame = +3
Query: 81 LKHKYASIA-PSNSHCIKDSLVNKYSCFGPSSHFTKNNFCNASISYPVICSQELLCSSRR 257
LK K+ + P H I L+ P+ HF N+ ++ ++
Sbjct: 18 LKFKFEFLTQPRRKHSILPHLI-------PNQHFHSTQNPNSEFNFREGFERDEFVG--- 67
Query: 258 YYLGSPSESESISLPNPDGLTSVXXXXXXXXXXIQKILKSHDKSS--GLSSALDECKIQL 431
+ P + E + +PDG T++ +Q +LK++ SS + AL +C++ L
Sbjct: 68 -LVADPGKRE-VFRRDPDGETALE---------VQNLLKTYRDSSVSEIEGALHQCRLSL 116
Query: 432 TEDLVVLVLQRNRSDWKLALSFFKWAS---TQNNYLHGPRAYNEILDIL 569
T+DLV+ VL+R+RSDW+ A FF WAS ++ Y G +NEILDIL
Sbjct: 117 TDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDIL 165
>dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 66.2 bits (160), Expect = 5e-09
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +3
Query: 357 IQKILKSHDKSSGLSSALDECKIQLTEDLVVLVLQRNRSDWKLALSFFKWASTQNNYLHG 536
+ ++LKS D + LS L ++ ED+V+ VLQ+ RS+W++AL FF WA+ Y HG
Sbjct: 86 VLRVLKSCDADADLSKYLCWFADEIDEDVVLKVLQKQRSNWQVALLFFTWAAGLPTYEHG 145
Query: 537 PRAYNEILDIL 569
PR Y E+LDIL
Sbjct: 146 PRTYIEMLDIL 156
>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 66.2 bits (160), Expect = 5e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Frame = +3
Query: 303 NPDGLTSVXXXXXXXXXXIQKILKSHDKSS--GLSSALDECKIQLTEDLVVLVLQRNRSD 476
+PDG T++ +Q +LK++ SS + AL +C++ LT+DLV+ VL+R+RSD
Sbjct: 81 DPDGETALE---------VQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSD 131
Query: 477 WKLALSFFKWAS---TQNNYLHGPRAYNEILDIL 569
W+ A FF WAS ++ Y G +NEILDIL
Sbjct: 132 WRPAYVFFNWASRCGIESGYSPGCGVHNEILDIL 165
>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 66.2 bits (160), Expect = 5e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Frame = +3
Query: 303 NPDGLTSVXXXXXXXXXXIQKILKSHDKSS--GLSSALDECKIQLTEDLVVLVLQRNRSD 476
+PDG T++ +Q +LK++ SS + AL +C++ LT+DLV+ VL+R+RSD
Sbjct: 81 DPDGETALE---------VQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSD 131
Query: 477 WKLALSFFKWAS---TQNNYLHGPRAYNEILDIL 569
W+ A FF WAS ++ Y G +NEILDIL
Sbjct: 132 WRPAYVFFNWASRCGIESGYSPGCGVHNEILDIL 165