BLASTX nr result

ID: Zingiber24_contig00036465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036465
         (206 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65094.1| holocarboxylase synthetase [Elaeis guineensis]          71   1e-10
ref|XP_003592516.1| hypothetical protein MTR_1g106890 [Medicago ...    60   2e-07
ref|XP_003592515.1| hypothetical protein MTR_1g106890 [Medicago ...    60   2e-07
gb|AFK42100.1| unknown [Lotus japonicus]                               59   7e-07
ref|XP_004489928.1| PREDICTED: uncharacterized protein LOC101504...    58   1e-06
ref|XP_002300905.2| hypothetical protein POPTR_0002s06540g [Popu...    57   2e-06
ref|XP_002458073.1| hypothetical protein SORBIDRAFT_03g026490 [S...    56   6e-06

>gb|AFS65094.1| holocarboxylase synthetase [Elaeis guineensis]
          Length = 216

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = +2

Query: 11  EDGLTAAPRAPFQNQQPPPST--HPINSTFQAPSGLFGQPI----PRSGHTDQAKNSVFS 172
           EDG+ + PR  FQ+Q P   T  H  NS  Q PSG FGQ      PR  H+DQ+KNSVFS
Sbjct: 88  EDGIVS-PRLQFQHQHPHVQTAMHFTNSNSQPPSGFFGQGAIGLAPRPSHSDQSKNSVFS 146

Query: 173 NALSSPVRRSL 205
           NALSSPVRRSL
Sbjct: 147 NALSSPVRRSL 157


>ref|XP_003592516.1| hypothetical protein MTR_1g106890 [Medicago truncatula]
           gi|355481564|gb|AES62767.1| hypothetical protein
           MTR_1g106890 [Medicago truncatula]
          Length = 190

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = +2

Query: 29  APRAPFQNQQPPPSTHPINSTFQAPSGLFGQPIPRSGH-------TDQAKNSVFSNALSS 187
           +PRAP QNQQP P     +S F   SG  GQ I  +G         +Q KNSVFSNALSS
Sbjct: 88  SPRAPLQNQQPQPMMPVTSSGFPVTSGSSGQTIAGAGQGLRSDYCENQPKNSVFSNALSS 147

Query: 188 PVRRSL 205
           PVRR+L
Sbjct: 148 PVRRNL 153


>ref|XP_003592515.1| hypothetical protein MTR_1g106890 [Medicago truncatula]
           gi|355481563|gb|AES62766.1| hypothetical protein
           MTR_1g106890 [Medicago truncatula]
           gi|388522085|gb|AFK49104.1| unknown [Medicago
           truncatula]
          Length = 195

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = +2

Query: 29  APRAPFQNQQPPPSTHPINSTFQAPSGLFGQPIPRSGH-------TDQAKNSVFSNALSS 187
           +PRAP QNQQP P     +S F   SG  GQ I  +G         +Q KNSVFSNALSS
Sbjct: 93  SPRAPLQNQQPQPMMPVTSSGFPVTSGSSGQTIAGAGQGLRSDYCENQPKNSVFSNALSS 152

Query: 188 PVRRSL 205
           PVRR+L
Sbjct: 153 PVRRNL 158


>gb|AFK42100.1| unknown [Lotus japonicus]
          Length = 207

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
 Frame = +2

Query: 23  TAAPRAPFQNQQPPPSTHPINSTFQAPSGLFGQPIPRSGHT-----DQAKNSVFSNALSS 187
           T +PRAP Q+QQ  P+ H  +S F   SG  G  I   G       +Q KNSVFSNALSS
Sbjct: 91  TMSPRAPLQHQQLQPAVHVPSSGFPVTSGSSGHTIVGQGLRSEQCDNQTKNSVFSNALSS 150

Query: 188 PVRRSL 205
           PVRRSL
Sbjct: 151 PVRRSL 156


>ref|XP_004489928.1| PREDICTED: uncharacterized protein LOC101504971 [Cicer arietinum]
          Length = 196

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/64 (53%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
 Frame = +2

Query: 29  APRAPFQNQQPPPSTHPINSTFQAPSGLFGQPIPRSG-----HTDQAKNSVFSNALSSPV 193
           +PRAP Q QQP P     +S F   SG  GQ +P  G       +Q KN VFSNALSSPV
Sbjct: 92  SPRAPPQQQQPQPMMPVTSSGFPVTSGSSGQTVPGQGLRSEYSENQPKNIVFSNALSSPV 151

Query: 194 RRSL 205
           RRSL
Sbjct: 152 RRSL 155


>ref|XP_002300905.2| hypothetical protein POPTR_0002s06540g [Populus trichocarpa]
           gi|550344416|gb|EEE80178.2| hypothetical protein
           POPTR_0002s06540g [Populus trichocarpa]
          Length = 204

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/66 (59%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
 Frame = +2

Query: 29  APRAPFQNQ--QPPPSTHPINSTFQAPSGLFGQPIP----RSGHTDQ-AKNSVFSNALSS 187
           +PR P Q+Q  QP PST   NSTF   SG  G P      RS H DQ +KN+VFSNALSS
Sbjct: 93  SPRTPHQHQNSQPIPST---NSTFLVSSGSSGLPATGQGTRSEHCDQQSKNTVFSNALSS 149

Query: 188 PVRRSL 205
           PVRRSL
Sbjct: 150 PVRRSL 155


>ref|XP_002458073.1| hypothetical protein SORBIDRAFT_03g026490 [Sorghum bicolor]
           gi|241930048|gb|EES03193.1| hypothetical protein
           SORBIDRAFT_03g026490 [Sorghum bicolor]
          Length = 203

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
 Frame = +2

Query: 2   HVAEDGLTAAPRAPFQNQQPPPSTHPINSTFQAPSGLFGQPIP----RSGHTDQAKNSVF 169
           H  + G T A  +P  NQ P  +    NS     +GL+GQ  P    R   TDQ+KN++F
Sbjct: 82  HEIDYGGTDAHVSPRVNQHPQIANPFTNSVVPPGTGLYGQSAPGFAPRPSVTDQSKNTIF 141

Query: 170 SNALSSPVRRSL 205
           SNALSSPVRRSL
Sbjct: 142 SNALSSPVRRSL 153


Top