BLASTX nr result

ID: Zingiber24_contig00036454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036454
         (230 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511234.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_006476986.1| PREDICTED: micronuclear linker histone polyp...    56   6e-06
ref|XP_006476985.1| PREDICTED: micronuclear linker histone polyp...    56   6e-06
ref|XP_006476984.1| PREDICTED: micronuclear linker histone polyp...    56   6e-06
ref|XP_006440051.1| hypothetical protein CICLE_v10019441mg [Citr...    56   6e-06
ref|XP_006440050.1| hypothetical protein CICLE_v10019441mg [Citr...    56   6e-06

>ref|XP_002511234.1| conserved hypothetical protein [Ricinus communis]
           gi|223550349|gb|EEF51836.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 543

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/76 (43%), Positives = 51/76 (67%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLRATKESSEYSNGNNIQPKSSEALETIVEIRRNYTT 50
           E RD  S   G E+T +T+Y Q+K   T++ S+    + +Q ++S+ L+ +  IRRNY T
Sbjct: 236 EGRDAHSNVNGTERTIRTVYTQKK--GTRKPSD----DCLQSRNSDVLQAVSTIRRNYAT 289

Query: 49  KLEQSEKRKQELLAQL 2
           KLE SEKRK++LLA++
Sbjct: 290 KLELSEKRKKDLLAEI 305


>ref|XP_006476986.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X3
           [Citrus sinensis]
          Length = 528

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 30/106 (28%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLR---------------------ATKE--------- 140
           E RD R    G E+T Q +Y Q+KL                      A +E         
Sbjct: 185 EVRDSRCAKNGIERTIQAVYAQKKLEHPIGDDLNGALYDVMRKELRHAVEEIKMELEQGM 244

Query: 139 SSEYSNGNNIQPKSSEALETIVEIRRNYTTKLEQSEKRKQELLAQL 2
           +   +N   +Q K+  AL+T   IRRNY  KLEQSEKRKQELLA++
Sbjct: 245 TKTKANDKCLQSKNIGALQTASTIRRNYAAKLEQSEKRKQELLAEI 290


>ref|XP_006476985.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X2
           [Citrus sinensis]
          Length = 572

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 30/106 (28%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLR---------------------ATKE--------- 140
           E RD R    G E+T Q +Y Q+KL                      A +E         
Sbjct: 229 EVRDSRCAKNGIERTIQAVYAQKKLEHPIGDDLNGALYDVMRKELRHAVEEIKMELEQGM 288

Query: 139 SSEYSNGNNIQPKSSEALETIVEIRRNYTTKLEQSEKRKQELLAQL 2
           +   +N   +Q K+  AL+T   IRRNY  KLEQSEKRKQELLA++
Sbjct: 289 TKTKANDKCLQSKNIGALQTASTIRRNYAAKLEQSEKRKQELLAEI 334


>ref|XP_006476984.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
           [Citrus sinensis]
          Length = 584

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 30/106 (28%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLR---------------------ATKE--------- 140
           E RD R    G E+T Q +Y Q+KL                      A +E         
Sbjct: 241 EVRDSRCAKNGIERTIQAVYAQKKLEHPIGDDLNGALYDVMRKELRHAVEEIKMELEQGM 300

Query: 139 SSEYSNGNNIQPKSSEALETIVEIRRNYTTKLEQSEKRKQELLAQL 2
           +   +N   +Q K+  AL+T   IRRNY  KLEQSEKRKQELLA++
Sbjct: 301 TKTKANDKCLQSKNIGALQTASTIRRNYAAKLEQSEKRKQELLAEI 346


>ref|XP_006440051.1| hypothetical protein CICLE_v10019441mg [Citrus clementina]
           gi|557542313|gb|ESR53291.1| hypothetical protein
           CICLE_v10019441mg [Citrus clementina]
          Length = 584

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 30/106 (28%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLR---------------------ATKE--------- 140
           E RD R    G E+T Q +Y Q+KL                      A +E         
Sbjct: 241 EVRDSRCAKNGIERTIQAVYAQKKLEHPIGDDLNGGLYDVMRKELRHAVEEIKMELEQGM 300

Query: 139 SSEYSNGNNIQPKSSEALETIVEIRRNYTTKLEQSEKRKQELLAQL 2
           +   +N   +Q K+  AL+T   IRRNY  KLEQSEKRKQELLA++
Sbjct: 301 TKTKTNDKCLQSKNIGALQTASTIRRNYAAKLEQSEKRKQELLAEI 346


>ref|XP_006440050.1| hypothetical protein CICLE_v10019441mg [Citrus clementina]
           gi|557542312|gb|ESR53290.1| hypothetical protein
           CICLE_v10019441mg [Citrus clementina]
          Length = 579

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 30/106 (28%)
 Frame = -2

Query: 229 EARDFRSGTCGDEKTFQTIYVQEKLR---------------------ATKE--------- 140
           E RD R    G E+T Q +Y Q+KL                      A +E         
Sbjct: 241 EVRDSRCAKNGIERTIQAVYAQKKLEHPIGDDLNGGLYDVMRKELRHAVEEIKMELEQGM 300

Query: 139 SSEYSNGNNIQPKSSEALETIVEIRRNYTTKLEQSEKRKQELLAQL 2
           +   +N   +Q K+  AL+T   IRRNY  KLEQSEKRKQELLA++
Sbjct: 301 TKTKTNDKCLQSKNIGALQTASTIRRNYAAKLEQSEKRKQELLAEI 346


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