BLASTX nr result
ID: Zingiber24_contig00036397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00036397
(237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001168783.1| histone one (H1) [Zea mays] gi|223973021|gb|... 73 5e-11
gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum] 71 2e-10
emb|CAJ38366.1| histone H1 [Plantago major] 69 8e-10
dbj|BAJ99821.1| predicted protein [Hordeum vulgare subsp. vulgare] 68 1e-09
ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha] 67 3e-09
ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833... 67 3e-09
dbj|BAA25204.1| histone H1 [Triticum aestivum] 66 4e-09
gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group] 66 6e-09
ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicu... 65 7e-09
dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicoti... 65 7e-09
ref|XP_006340718.1| PREDICTED: histone H1-like [Solanum tuberosum] 65 7e-09
ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group] g... 65 7e-09
gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indi... 65 7e-09
gb|AAN37904.1| histone H1D [Nicotiana tabacum] 65 7e-09
sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03... 65 9e-09
gb|ESW29933.1| hypothetical protein PHAVU_002G110800g [Phaseolus... 65 9e-09
gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense] 65 9e-09
gb|AAD41008.1|AF107026_1 histone H1 WH1A.3 [Triticum aestivum] 65 9e-09
dbj|BAA25203.1| histone H1 [Triticum aestivum] 65 9e-09
gb|EMT26985.1| Histone H1 [Aegilops tauschii] 65 1e-08
>ref|NP_001168783.1| histone one (H1) [Zea mays] gi|223973021|gb|ACN30698.1| unknown
[Zea mays]
Length = 307
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +2
Query: 41 KLIGALHLRELASGGELLQLEEKHLTEIGRKMRLVLILHGLCDRVRARSAPFLQRHDRLL 220
+L+G LHL ELA+G ELL+L E+ L E+GR++ LVL+L L DRV A P L+R D L
Sbjct: 169 QLVGVLHLGELAAGDELLELAEQELAEVGRELVLVLVLDELGDRVLAGPRPLLERRDSLR 228
Query: 221 DHLGV 235
DHLGV
Sbjct: 229 DHLGV 233
>gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum]
Length = 275
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEM+ EAI LKER GSSPYAIAK +EDKHKAHLPANFR K
Sbjct: 64 YAEMVSEAITALKERTGSSPYAIAKFVEDKHKAHLPANFRKILSVQLKKLVASGKLTKVK 123
Query: 55 SSYKL 41
+SYKL
Sbjct: 124 ASYKL 128
>emb|CAJ38366.1| histone H1 [Plantago major]
Length = 164
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/65 (58%), Positives = 42/65 (64%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y EMIKEA+V LKERGGSSP+AIAK ME+KHKA LPANFR K
Sbjct: 32 YFEMIKEALVALKERGGSSPHAIAKYMEEKHKAVLPANFRKMLGLQLKNSAAKGKLIKIK 91
Query: 55 SSYKL 41
+SYKL
Sbjct: 92 ASYKL 96
>dbj|BAJ99821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEM+ EAI LKERGGSS AIAK +EDKHKAHLPANFR K
Sbjct: 64 YAEMVSEAITALKERGGSSTIAIAKFVEDKHKAHLPANFRKMLSVQLKKLVASGKLTKVK 123
Query: 55 SSYKL 41
+SYKL
Sbjct: 124 ASYKL 128
>ref|XP_006651910.1| PREDICTED: histone H1-like [Oryza brachyantha]
Length = 295
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFR 116
YAEMI EAI TLKER GSS YAIAK +EDKHK HLP+NFR
Sbjct: 60 YAEMISEAITTLKERTGSSQYAIAKFLEDKHKDHLPSNFR 99
>ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833820 [Brachypodium
distachyon]
Length = 297
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEM+ EAI TLKER GSS YAIAK +E+KHKAHLP NFR K
Sbjct: 62 YAEMVSEAISTLKERTGSSQYAIAKFVEEKHKAHLPPNFRKLLLVQLKKLVAAGKLTKVK 121
Query: 55 SSYKL 41
SSYKL
Sbjct: 122 SSYKL 126
>dbj|BAA25204.1| histone H1 [Triticum aestivum]
Length = 288
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEM+ EAI LKERGGSS AI K +EDKHKAHLPANFR K
Sbjct: 70 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 129
Query: 55 SSYKL 41
+SYKL
Sbjct: 130 ASYKL 134
>gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]
Length = 315
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFR 116
YAEMI EAIVTLKER GSS YAI K +EDKHK HLP NFR
Sbjct: 76 YAEMIMEAIVTLKERTGSSQYAIGKFLEDKHKNHLPGNFR 115
>ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicum]
gi|825521|emb|CAA77867.1| H1 histone-like protein
[Solanum lycopersicum]
Length = 207
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/65 (52%), Positives = 41/65 (63%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA+++L E+GGSSPYA+AK MEDKHK LPANFR K
Sbjct: 57 YFQMIKEALLSLNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 ASYKL 121
>dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicotiana tabacum]
Length = 206
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA++ L E+GGSSPYAIAK MEDKHK LPANFR K
Sbjct: 57 YFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 ASYKL 121
>ref|XP_006340718.1| PREDICTED: histone H1-like [Solanum tuberosum]
Length = 207
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA++ L E+GGSSPYAIAK MEDKHK LPANFR K
Sbjct: 57 YFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 ASYKL 121
>ref|NP_001051573.1| Os03g0799000 [Oryza sativa Japonica Group]
gi|28209501|gb|AAO37519.1| histone-like protein [Oryza
sativa Japonica Group] gi|108711572|gb|ABF99367.1|
linker histone H1 and H5 family protein, expressed
[Oryza sativa Japonica Group]
gi|113550044|dbj|BAF13487.1| Os03g0799000 [Oryza sativa
Japonica Group] gi|125588261|gb|EAZ28925.1| hypothetical
protein OsJ_12968 [Oryza sativa Japonica Group]
gi|215708730|dbj|BAG93999.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 293
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEMI EAI TLKER GSS YAI K +EDKHK HLP+NFR K
Sbjct: 57 YAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAGKLTKVK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 NSYKL 121
>gb|EAY92196.1| hypothetical protein OsI_13914 [Oryza sativa Indica Group]
Length = 293
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEMI EAI TLKER GSS YAI K +EDKHK HLP+NFR K
Sbjct: 57 YAEMISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAGKLTKVK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 NSYKL 121
>gb|AAN37904.1| histone H1D [Nicotiana tabacum]
Length = 206
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA++ L E+GGSSPYAIAK MEDKHK LPANFR K
Sbjct: 57 YFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIK 116
Query: 55 SSYKL 41
+SYKL
Sbjct: 117 ASYKL 121
>sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03076.1| histone H1
[Solanum pennellii]
Length = 202
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA++ L E+GGSSPYA+AK MEDKHK LPANFR K
Sbjct: 52 YFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 111
Query: 55 SSYKL 41
+SYKL
Sbjct: 112 ASYKL 116
>gb|ESW29933.1| hypothetical protein PHAVU_002G110800g [Phaseolus vulgaris]
Length = 193
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/65 (53%), Positives = 41/65 (63%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA+V L E+GGSSPYAIAK ME+KHKA LPANF+ K
Sbjct: 47 YFQMIKEALVALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQATRGNLVKIK 106
Query: 55 SSYKL 41
+SYKL
Sbjct: 107 ASYKL 111
>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
Length = 202
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
Y +MIKEA++ L E+GGSSPYA+AK MEDKHK LPANFR K
Sbjct: 52 YFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 111
Query: 55 SSYKL 41
+SYKL
Sbjct: 112 ASYKL 116
>gb|AAD41008.1|AF107026_1 histone H1 WH1A.3 [Triticum aestivum]
Length = 227
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFR 116
YAEM+ EAI LKER GSS AIAK +EDKHKAHLPANFR
Sbjct: 46 YAEMVSEAIAALKERSGSSTIAIAKFIEDKHKAHLPANFR 85
>dbj|BAA25203.1| histone H1 [Triticum aestivum]
Length = 284
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFRXXXXXXXXXXXXXXXXXXXK 56
YAEM+ EAI LKER GSS AIAK +EDKHKAHLPANFR K
Sbjct: 70 YAEMVTEAIAALKERNGSSTVAIAKYIEDKHKAHLPANFRKFMLTQIKKLVAAGKLTKVK 129
Query: 55 SSYKL 41
+SYKL
Sbjct: 130 ASYKL 134
>gb|EMT26985.1| Histone H1 [Aegilops tauschii]
Length = 171
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -3
Query: 235 YAEMIKEAIVTLKERGGSSPYAIAKAMEDKHKAHLPANFR 116
YAEM+ EAI LKER GSS AIAK +EDKHKAHLPANFR
Sbjct: 70 YAEMVTEAIAALKERNGSSTVAIAKYIEDKHKAHLPANFR 109