BLASTX nr result

ID: Zingiber24_contig00036380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036380
         (297 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828483.1| hypothetical protein AMTR_s00060p00158750 [A...    61   1e-07
ref|XP_002303188.2| CD2-binding family protein [Populus trichoca...    56   4e-06
gb|EOX98804.1| CD2-binding protein-related, putative [Theobroma ...    55   7e-06

>ref|XP_006828483.1| hypothetical protein AMTR_s00060p00158750 [Amborella trichopoda]
           gi|548833231|gb|ERM95899.1| hypothetical protein
           AMTR_s00060p00158750 [Amborella trichopoda]
          Length = 436

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
 Frame = +1

Query: 28  KLPLPLREFDPPKGQT----QRQVKFPKGKKAKRVDADG-IQDGNGEKKRWM-DPSLAAK 189
           K P P  EF     +     +R+V+FPKGKK KR D    ++D +GE    + DP  AAK
Sbjct: 8   KRPRPPEEFSDSHKEDNRPRERKVRFPKGKKVKRTDGTSLVKDESGENVIGLTDPRFAAK 67

Query: 190 ERSKRRNKMRESEVLGDQVDGL-----SGEGQYEDNTNFED 297
           ER+ RRN++ E+E+L D+  G+       E +YED+  FE+
Sbjct: 68  ERANRRNQI-EAELLSDENTGILDDIAGAEEEYEDDGEFEE 107


>ref|XP_002303188.2| CD2-binding family protein [Populus trichocarpa]
           gi|550342158|gb|EEE78167.2| CD2-binding family protein
           [Populus trichocarpa]
          Length = 354

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = +1

Query: 55  DPPKGQTQRQVKFPKGKKAKRVDADGIQDGNGEKKR---WMDPSLAAKERSKRRNKMRES 225
           D  K   Q++V+FPKGKK K VD + +  G  E++      DP LAAKER+  R+ + + 
Sbjct: 15  DDDKSNKQKKVRFPKGKKVKSVD-ERVDRGKAEEEGPSDLKDPRLAAKERAMLRSLITDE 73

Query: 226 EVLGDQVDGLSGEGQYEDNTNF 291
              GD  D  + E  YE+N NF
Sbjct: 74  GFSGDINDASAAEVAYEENENF 95


>gb|EOX98804.1| CD2-binding protein-related, putative [Theobroma cacao]
          Length = 419

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
 Frame = +1

Query: 55  DPPKGQTQRQVKFPKGKKAK----RVDADGIQDGNGEKKRWMDPSLAAKERSKRRNKMRE 222
           D  K   Q++V+FPKGKK K     V+   ++DG+G+ K   DP LAAKER+K R+++  
Sbjct: 19  DSDKPPAQKRVRFPKGKKVKPGEEPVNRVDVEDGSGDLK---DPRLAAKERAKHRSQITT 75

Query: 223 SEVLGDQV----DGLSGEGQYEDNTNFED 297
                D      D  + E  YEDN NF D
Sbjct: 76  ELFTADGQGMLNDVSAAEVAYEDNENFVD 104


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