BLASTX nr result

ID: Zingiber24_contig00036346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036346
         (223 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973980.1| PREDICTED: atherin-like [Setaria italica]          55   1e-05
ref|XP_004971061.1| PREDICTED: nucleolin-like [Setaria italica]        55   1e-05

>ref|XP_004973980.1| PREDICTED: atherin-like [Setaria italica]
          Length = 276

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/74 (45%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
 Frame = +1

Query: 31  VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXX-----GGGALR-----VCCVC 180
           VSLM+LLEQTD QWS G                           G GA R      CCVC
Sbjct: 172 VSLMALLEQTDRQWSAGAGAAAPREEEDVAGAEALELVEDDTEPGAGAGRGVVAGCCCVC 231

Query: 181 MMRLKGAAFIPCGH 222
           M R KGAAFIPCGH
Sbjct: 232 MARAKGAAFIPCGH 245


>ref|XP_004971061.1| PREDICTED: nucleolin-like [Setaria italica]
          Length = 301

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +1

Query: 31  VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGA----LRVCCVCMMRLKG 198
           +SLM+LLEQ+D+QW +                       G G     + VCCVCM+R KG
Sbjct: 203 MSLMALLEQSDSQWDDDEDDEGGGGGARKNGEGDDDDDDGEGREEEMVHVCCVCMVRHKG 262

Query: 199 AAFIPCGH 222
           AAFIPCGH
Sbjct: 263 AAFIPCGH 270


Top