BLASTX nr result

ID: Zingiber24_contig00036225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036225
         (412 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006395120.1| hypothetical protein EUTSA_v10004871mg [Eutr...    62   8e-08
gb|EMJ24946.1| hypothetical protein PRUPE_ppa010514mg [Prunus pe...    55   1e-05

>ref|XP_006395120.1| hypothetical protein EUTSA_v10004871mg [Eutrema salsugineum]
           gi|557091759|gb|ESQ32406.1| hypothetical protein
           EUTSA_v10004871mg [Eutrema salsugineum]
          Length = 227

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
 Frame = -1

Query: 412 RKARRSGDVAVVEFASYQPSIGVXXXXXXXXXXXXXXXXTQDSPLA-----YLELRSRRL 248
           +K++ + D+   E      S+GV                  DS LA     YL+LRSRRL
Sbjct: 6   KKSKITSDIGATEITE-PTSLGVRTRAAKTLALKRLNSSASDSALAADSSCYLQLRSRRL 64

Query: 247 EKTLPPPHAFKPKDTPPKESSTIK---ANPRISPPNAGTPNSGREGSFRSRNSEK--GCS 83
           EK   PP   +PK  P    S IK   ++ ++   N+ T  SG     RS N +   G S
Sbjct: 65  EK---PPSLAEPKQPPRPHKSGIKESGSSAQVDSVNSNTAASGSVPVARSCNGDDCFGNS 121

Query: 82  SVAEVLCAENNMEPESRE--RETTPCSLI 2
             AE  C EN+++ ESR   RE TPC+++
Sbjct: 122 VSAEAFCGENSLDFESRHSTRENTPCNVV 150


>gb|EMJ24946.1| hypothetical protein PRUPE_ppa010514mg [Prunus persica]
          Length = 247

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 30/167 (17%)
 Frame = -1

Query: 412 RKARRSGDVAVVEFASYQP------SIGVXXXXXXXXXXXXXXXXTQDSPLAYLELRSRR 251
           RK++ +G++AV+E +   P      S+GV                      +YL+LRSRR
Sbjct: 6   RKSKSAGEMAVMEVSHPHPHPQSQASLGVCTRAKTLALQRSSASPVTSG--SYLQLRSRR 63

Query: 250 LEKTLPP---PHAFKPKDTPPKESSTIKANPRISPPNAGTPNSG-------------REG 119
           LEK  PP   P   +PK   PK SS  +A  R+    +     G             +EG
Sbjct: 64  LEK--PPILLPKRLEPKRQKPKASSNSRATSRLGVHGSVAKAQGQKAEEADEMAPKEKEG 121

Query: 118 SFR-----SRNSEKGCSSVAEVLCAENNMEPESRE---RETTPCSLI 2
             +     + N E G   V E    EN +E E RE   RE+TPCSLI
Sbjct: 122 QEKNEHNNTNNKENGDLGVEEASFGENVLELEGRERTTRESTPCSLI 168


Top