BLASTX nr result

ID: Zingiber24_contig00036118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00036118
         (295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGI62055.1| SQUAMOSA promoter-binding-like 7 [Erycina pusilla]      78   1e-12
gb|AEP96375.1| teosinte glume architecture 1, partial [Joinville...    65   7e-09
ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like pr...    59   9e-07

>gb|AGI62055.1| SQUAMOSA promoter-binding-like 7 [Erycina pusilla]
          Length = 395

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
 Frame = -3

Query: 293 MLSSDQVYIGQPLIASTQYGNLTQCSHS---TASEAISPVRYSCSSIEN--VRTVLVSNA 129
           M+  D++ +GQPL +S QYG+  QC +S    AS+ +SP  + CS +EN  + TVLVS A
Sbjct: 306 MMPVDRIPMGQPLSSSFQYGS-NQCRYSRSQAASDNVSPTGFLCSGVENEHLGTVLVSGA 364

Query: 128 DAAGVHCQGIFRTGNEGSSDKISEALPFSWE 36
             A ++CQ IF  G+EGSSD  S +L FSW+
Sbjct: 365 TDADLNCQNIFNVGDEGSSDGASHSLHFSWQ 395


>gb|AEP96375.1| teosinte glume architecture 1, partial [Joinvillea ascendens]
          Length = 111

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -3

Query: 284 SDQVYIGQPLIASTQYGNLTQCSHSTASEAISPVRYSCSSIEN--VRTVLVSNADAAGVH 111
           ++ + + QPL+ + Q+G+ +  + S AS  +S   +SC  +EN  + TVLV +++   ++
Sbjct: 27  TEHIPMAQPLVPNLQFGSSSWFARSQASSGVSATGFSCPGMENEQLNTVLVPSSNNNEMN 86

Query: 110 CQGIFRTGNEGSSDKISEALPFSWE 36
             GIF  G EGSSD  S +LPFSW+
Sbjct: 87  YHGIFHVGGEGSSDGTSPSLPFSWQ 111


>ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like protein 16-like
           [Brachypodium distachyon]
          Length = 425

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 284 SDQVYIGQPLIASTQYGNLTQCSHSTASE-AISPVRYSCSSIENVRTVLVSNADAAGVHC 108
           ++ + I QPL++S Q+ + +  + S A+  A+ P  +SC  +EN +   V ++D   ++ 
Sbjct: 342 NEHIPIAQPLVSSLQFSSSSWFARSQAATGAVPPTGFSCPVVENEQLNTVLSSDNNEMNY 401

Query: 107 QGIFRTGNEGSSDKISEALPFSWE 36
            GIF  G EGSSD    +LPF+W+
Sbjct: 402 SGIFHVGGEGSSDGAPPSLPFTWQ 425


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