BLASTX nr result
ID: Zingiber24_contig00036037
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00036037
(423 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004308713.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 70 4e-10
ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like... 69 8e-10
ref|XP_002463188.1| hypothetical protein SORBIDRAFT_02g039360 [S... 67 2e-09
ref|XP_004308979.1| PREDICTED: RING-H2 finger protein ATL72-like... 66 4e-09
ref|XP_006354593.1| PREDICTED: RING-H2 finger protein ATL51-like... 66 5e-09
ref|XP_004229518.1| PREDICTED: RING-H2 finger protein ATL51-like... 66 5e-09
gb|AAV64201.1| ring-H2 zinc finger protein [Zea mays] gi|5574110... 66 5e-09
gb|EXB64911.1| RING-H2 finger protein ATL51 [Morus notabilis] 65 7e-09
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 65 7e-09
gb|EMS46532.1| E3 ubiquitin-protein ligase ATL6 [Triticum urartu] 65 9e-09
ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like... 65 9e-09
ref|XP_004974931.1| PREDICTED: RING-H2 finger protein ATL1-like ... 65 1e-08
ref|XP_004956709.1| PREDICTED: RING-H2 finger protein ATL46-like... 65 1e-08
gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobro... 65 1e-08
gb|EMT22800.1| Putative RING-H2 finger protein ATL4C [Aegilops t... 65 1e-08
ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group] g... 65 1e-08
gb|EEE57231.1| hypothetical protein OsJ_07217 [Oryza sativa Japo... 65 1e-08
ref|XP_006368390.1| hypothetical protein POPTR_0001s02360g [Popu... 64 2e-08
ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like... 64 2e-08
ref|XP_003580475.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 64 2e-08
>ref|XP_004308713.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Fragaria vesca
subsp. vesca]
Length = 328
Score = 69.7 bits (169), Expect = 4e-10
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNEAAIFV--GGD 250
LRLLPLC HAFH+ CID WL+++ CPLCR+ P+ A D+E V G
Sbjct: 135 LRLLPLCCHAFHVSCIDTWLRSQQTCPLCRS-----------PISASDSELMTLVENAGS 183
Query: 249 ELRAMKRSMSME---VAREQRAMSSVSLNRSFSAGRF 148
+R S +E V+R Q S+ S RS+S G F
Sbjct: 184 SIRGGGDSFRLEIGSVSRRQTTTSNSSARRSYSIGSF 220
>ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
gi|449517886|ref|XP_004165975.1| PREDICTED: RING-H2
finger protein ATL51-like [Cucumis sativus]
Length = 365
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVD---AHDNEAAIFVGG 253
LRLLP C HAFHL CID WLK+ +CPLCR N S PP H ++AA+ V
Sbjct: 158 LRLLPKCSHAFHLACIDTWLKSSSSCPLCRCNIASTNPPPPSVTALGYRHSSDAAVVVIQ 217
Query: 252 D-ELRAMKRSMSMEVAREQRAMSSVSLNRSFSAGRFKGGN 136
D ++ +EV + SLNR+ ++ G+
Sbjct: 218 DLSENVSLEAVVVEVVTDSSNQEEGSLNRNSNSRNLDQGD 257
>ref|XP_002463188.1| hypothetical protein SORBIDRAFT_02g039360 [Sorghum bicolor]
gi|241926565|gb|EER99709.1| hypothetical protein
SORBIDRAFT_02g039360 [Sorghum bicolor]
Length = 263
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Frame = -1
Query: 420 RLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAP-------PQGEPVDAHDNEAAIF 262
R+LP CGHAFH+ C+D WL++ CPLCR AV D P P+ +P + +F
Sbjct: 118 RVLPRCGHAFHVDCVDMWLRSHSTCPLCRCPAVDDPPVPPAVPTPEADPESPNFPTNVLF 177
Query: 261 VGGDELRAMKRSMSMEVAREQRAMSSVSLNRSFSAG 154
G + + RS S + R + + V L R G
Sbjct: 178 FGSQDEVSTGRSQSQQ--RSAASQACVGLRRLIGCG 211
>ref|XP_004308979.1| PREDICTED: RING-H2 finger protein ATL72-like [Fragaria vesca subsp.
vesca]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNEAAIFVGGDE 247
+R+LP C H FH+RCID WL + +CP CR + + +A PQG + N+ + V GDE
Sbjct: 166 VRVLPNCNHGFHVRCIDTWLFSHSSCPTCRQSLLLEAQPQGSDSPSGQNDVVVAVAGDE 224
>ref|XP_006354593.1| PREDICTED: RING-H2 finger protein ATL51-like [Solanum tuberosum]
Length = 306
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPP 307
LRLLP C HAFHL CID WLK+ NCPLCRAN VS P
Sbjct: 153 LRLLPKCSHAFHLPCIDTWLKSHPNCPLCRANVVSPPAP 191
>ref|XP_004229518.1| PREDICTED: RING-H2 finger protein ATL51-like [Solanum lycopersicum]
Length = 307
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPP 307
LRLLP C HAFHL CID WLK+ NCPLCRAN VS P
Sbjct: 152 LRLLPKCSHAFHLPCIDTWLKSHPNCPLCRANVVSPPAP 190
>gb|AAV64201.1| ring-H2 zinc finger protein [Zea mays] gi|55741101|gb|AAV64239.1|
ring-H2 zinc finger protein [Zea mays]
Length = 258
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = -1
Query: 420 RLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAP-------PQGEPVDAHDNEAAIF 262
R+LP CGHAFH+ C+D WL++ CPLCR AV D P P+ +P + +F
Sbjct: 108 RVLPRCGHAFHVDCVDMWLRSHSTCPLCRCPAVDDPPVPPAVPTPEADPESPNFPTNVLF 167
Query: 261 VGGDELRAMKRSMSMEVAREQRAMSSV 181
G + + RS S + Q A + +
Sbjct: 168 FGSQDEVSTGRSQSQQHTAPQEACAGL 194
>gb|EXB64911.1| RING-H2 finger protein ATL51 [Morus notabilis]
Length = 379
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPP----------QGEPVDAHDNE 274
+RLLP C HAFH++CID WL++ NCPLCRAN V P E A+D++
Sbjct: 163 VRLLPKCSHAFHIQCIDTWLRSHSNCPLCRANVVVCVNPPTATEGTTFSSNESAAANDDQ 222
Query: 273 AAIFVGGD 250
FVG D
Sbjct: 223 NRSFVGQD 230
>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
Length = 373
Score = 65.5 bits (158), Expect = 7e-09
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVS 319
LRLLP C HAFHL+CID WLK+ NCPLCRAN +S
Sbjct: 157 LRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIIS 191
>gb|EMS46532.1| E3 ubiquitin-protein ligase ATL6 [Triticum urartu]
Length = 266
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNEAAIFV----G 256
LRLLP C HAFH CID WL+ R CPLCRAN PP PV + A + +
Sbjct: 137 LRLLPHCSHAFHTDCIDPWLETRTTCPLCRANLEKPPPPAAMPVPSPPPHAVVGIPIREE 196
Query: 255 GDELRAMKRSMSMEVAREQRAMSSVSLNRSFSAG 154
D ++ + E+ + +R + L RS S G
Sbjct: 197 TDSDVDERKQEAAELEKLRRERRAARLLRSHSTG 230
>ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like [Fragaria vesca subsp.
vesca]
Length = 367
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/61 (54%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVS-------DAPPQ-GEPVDAHDNEAA 268
LRLLP C HAFHL CID WLK+ NCPLCRA+ VS PP EP + NE
Sbjct: 163 LRLLPKCNHAFHLPCIDTWLKSHSNCPLCRASVVSTNAPTHHQVPPSVTEPPSSTSNEEV 222
Query: 267 I 265
I
Sbjct: 223 I 223
>ref|XP_004974931.1| PREDICTED: RING-H2 finger protein ATL1-like [Setaria italica]
Length = 246
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVD--------AHDNEAA 268
LRLLP C HAFH+ CIDAWL+A NCPLCRA V P G +D A + ++
Sbjct: 110 LRLLPPCLHAFHIDCIDAWLQATANCPLCRAAVVELQPADGIVIDIATTTCPEAEETPSS 169
Query: 267 IFVGGDELRAMKRSMSMEVAREQR 196
+ L ++RS+SM+ + ++R
Sbjct: 170 T----NNLLPVRRSLSMDSSTDRR 189
>ref|XP_004956709.1| PREDICTED: RING-H2 finger protein ATL46-like [Setaria italica]
Length = 400
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN------AVSDAPPQGEPVDAHDNEAA 268
LRLLP CGHAFH+ CID WL++ CPLCR A +DAP G + H +A+
Sbjct: 194 LRLLPACGHAFHVACIDVWLRSSATCPLCRTKLSAHHLAAADAPSAGPDAEEHKQQAS 251
>gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 370
Score = 64.7 bits (156), Expect = 1e-08
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN-------------AVSDAPPQGEPVDAH 283
LRLLP C HAFH+ CID WL++ NCPLCRAN A++++PP E +
Sbjct: 156 LRLLPKCSHAFHVHCIDTWLRSHSNCPLCRANIIFISASPLPLPPALTESPPGNESLQDR 215
Query: 282 D---NEAAIFVGGDELRAMKRSMSMEVAREQRAMSSV--SLNRSFS-AGRFKGGNLTLPL 121
NE A R+M+ EV R Q +S + + +R+FS G +G + + +
Sbjct: 216 QPVTNEYAAAAQDSGRRSMQ-----EVDRFQSDLSRLPKTPSRAFSDLGNAQGRDSVIEI 270
Query: 120 *DHSRQHTR 94
+ S Q R
Sbjct: 271 REESYQQMR 279
>gb|EMT22800.1| Putative RING-H2 finger protein ATL4C [Aegilops tauschii]
Length = 265
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNEAAIFV----- 259
LRLLP C HAFH CID WL+ R CPLCRAN PP P + A + +
Sbjct: 59 LRLLPHCSHAFHPDCIDPWLETRTTCPLCRANLEKPPPPAAAPAPSSPPHAVVAMPVQQD 118
Query: 258 --GGDELRAMKRSMSMEVAREQRAMSSVSLNRSFSAGRFKG 142
D + ++ + E+ + +R + L RS S G G
Sbjct: 119 EPKEDSDKDDRKEEAAELEKLRRERRAARLLRSHSTGHSAG 159
>ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group]
gi|46806010|dbj|BAD17284.1| zinc finger (C3HC4-type RING
finger)-like protein [Oryza sativa Japonica Group]
gi|255671016|dbj|BAH91760.1| Os02g0572350 [Oryza sativa
Japonica Group]
Length = 325
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNE 274
LRLLP CGHAFH+ CIDAWL+A NCPLCRA+ + P DA D E
Sbjct: 122 LRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLH---PADADADAGDGE 168
>gb|EEE57231.1| hypothetical protein OsJ_07217 [Oryza sativa Japonica Group]
Length = 217
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGEPVDAHDNE 274
LRLLP CGHAFH+ CIDAWL+A NCPLCRA+ + P DA D E
Sbjct: 20 LRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLH---PADADADAGDGE 66
>ref|XP_006368390.1| hypothetical protein POPTR_0001s02360g [Populus trichocarpa]
gi|550346303|gb|ERP64959.1| hypothetical protein
POPTR_0001s02360g [Populus trichocarpa]
Length = 368
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAV--SDAPPQGEP 295
+RLLP C HAFH+ CID WL++ NCPLCRAN V S +PPQ P
Sbjct: 157 IRLLPKCSHAFHVPCIDTWLRSHSNCPLCRANIVFFSASPPQLPP 201
>ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449496527|ref|XP_004160157.1| PREDICTED: RING-H2
finger protein ATL54-like [Cucumis sativus]
Length = 397
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSD-APPQGEPVDAHDNEAA 268
LRLLP C HAFH+ CID WL++ NCPLCRA +SD A P P++ N+ A
Sbjct: 179 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPA 231
>ref|XP_003580475.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 387
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Frame = -1
Query: 423 LRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN----AVSDAPPQGEPVDAH 283
LRLLP C HAFH +CID WLK+ NCPLCR+N +V P+ E DAH
Sbjct: 175 LRLLPKCSHAFHQQCIDTWLKSHSNCPLCRSNITFVSVGAVSPEPEGGDAH 225