BLASTX nr result

ID: Zingiber24_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035878
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ24285.1| hypothetical protein PRUPE_ppa007000mg [Prunus pe...    64   2e-08
ref|XP_006416837.1| hypothetical protein EUTSA_v10007905mg [Eutr...    62   6e-08
ref|XP_006305067.1| hypothetical protein CARUB_v10009433mg [Caps...    62   6e-08
ref|XP_002890155.1| kelch repeat-containing F-box family protein...    62   6e-08
ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thalian...    62   6e-08
ref|XP_002315479.2| kelch repeat-containing F-box family protein...    60   3e-07
ref|XP_006353737.1| PREDICTED: F-box/kelch-repeat protein At1g16...    60   4e-07
ref|XP_004243661.1| PREDICTED: F-box/kelch-repeat protein At1g16...    60   4e-07
ref|XP_006353736.1| PREDICTED: F-box/kelch-repeat protein At1g16...    59   5e-07
ref|XP_004297025.1| PREDICTED: F-box/kelch-repeat protein At1g16...    58   2e-06
ref|XP_002519349.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
gb|EOY10559.1| Galactose oxidase/kelch repeat superfamily protei...    56   4e-06
gb|ADE77005.1| unknown [Picea sitchensis]                              55   7e-06

>gb|EMJ24285.1| hypothetical protein PRUPE_ppa007000mg [Prunus persica]
          Length = 386

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + +SIIPGLP+DLALRCLAM+SHGYHGLLE VSK
Sbjct: 1   MESVHQSIIPGLPDDLALRCLAMVSHGYHGLLETVSK 37


>ref|XP_006416837.1| hypothetical protein EUTSA_v10007905mg [Eutrema salsugineum]
           gi|557094608|gb|ESQ35190.1| hypothetical protein
           EUTSA_v10007905mg [Eutrema salsugineum]
          Length = 383

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + +SIIPGLP+DLALRCLA +SHGYHG LECVS+
Sbjct: 1   MESIEQSIIPGLPDDLALRCLAKLSHGYHGALECVSR 37


>ref|XP_006305067.1| hypothetical protein CARUB_v10009433mg [Capsella rubella]
           gi|482573778|gb|EOA37965.1| hypothetical protein
           CARUB_v10009433mg [Capsella rubella]
          Length = 383

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +3

Query: 132 MSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           + +SIIPGLP+DLALRC+A +SHGYHGLLECVS+
Sbjct: 4   IEQSIIPGLPDDLALRCIAKLSHGYHGLLECVSR 37


>ref|XP_002890155.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335997|gb|EFH66414.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 404

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/37 (67%), Positives = 34/37 (91%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + +SIIPGLP+DLALRC+A +SHGYHG+LECVS+
Sbjct: 22  MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSR 58


>ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|122242689|sp|Q0WW40.1|FBK5_ARATH RecName:
           Full=F-box/kelch-repeat protein At1g16250
           gi|110741130|dbj|BAE98658.1| hypothetical protein
           [Arabidopsis thaliana] gi|119360151|gb|ABL66804.1|
           At1g16250 [Arabidopsis thaliana]
           gi|332191305|gb|AEE29426.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 383

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/37 (67%), Positives = 34/37 (91%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + +SIIPGLP+DLALRC+A +SHGYHG+LECVS+
Sbjct: 1   MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSR 37


>ref|XP_002315479.2| kelch repeat-containing F-box family protein [Populus trichocarpa]
           gi|550328820|gb|EEF01650.2| kelch repeat-containing
           F-box family protein [Populus trichocarpa]
          Length = 383

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 132 MSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           M + IIPGLP+DLALRCLA +SHGYHGLLE VSK
Sbjct: 1   MHQPIIPGLPDDLALRCLAKVSHGYHGLLESVSK 34


>ref|XP_006353737.1| PREDICTED: F-box/kelch-repeat protein At1g16250-like isoform X2
           [Solanum tuberosum]
          Length = 382

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + + +IPGLP+DLALRCLAMISHGYHG+LE VS+
Sbjct: 1   METIDQPLIPGLPDDLALRCLAMISHGYHGILETVSR 37


>ref|XP_004243661.1| PREDICTED: F-box/kelch-repeat protein At1g16250-like [Solanum
           lycopersicum]
          Length = 382

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + + +IPGLP+DLALRCLAMISHGYHG+LE VS+
Sbjct: 1   METIDQPLIPGLPDDLALRCLAMISHGYHGILETVSR 37


>ref|XP_006353736.1| PREDICTED: F-box/kelch-repeat protein At1g16250-like isoform X1
           [Solanum tuberosum]
          Length = 396

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = +3

Query: 126 DEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           + + + +IPGLP+DLALRCLAMISHGYHG+LE VS+
Sbjct: 16  ETIDQPLIPGLPDDLALRCLAMISHGYHGILETVSR 51


>ref|XP_004297025.1| PREDICTED: F-box/kelch-repeat protein At1g16250-like [Fragaria
           vesca subsp. vesca]
          Length = 379

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + ++IIPGLP+DLALRCL  +SHGYHGL+E VSK
Sbjct: 1   MESLHQAIIPGLPDDLALRCLTKLSHGYHGLVETVSK 37


>ref|XP_002519349.1| conserved hypothetical protein [Ricinus communis]
           gi|223541664|gb|EEF43213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +3

Query: 126 DEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           + + + IIPGLP+DLALRCLA +SHG+HGLLE VSK
Sbjct: 7   ESIHQPIIPGLPDDLALRCLAKLSHGHHGLLETVSK 42


>gb|EOY10559.1| Galactose oxidase/kelch repeat superfamily protein [Theobroma
           cacao]
          Length = 382

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +3

Query: 123 VDEMSESIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           ++ + E+I+PGLP+DLALRCLA +SHGY G+LE VSK
Sbjct: 1   MEPVKEAILPGLPDDLALRCLAKLSHGYDGVLEAVSK 37


>gb|ADE77005.1| unknown [Picea sitchensis]
          Length = 389

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 141 SIIPGLPNDLALRCLAMISHGYHGLLECVSK 233
           +IIPGLP+DLAL+CLA +SHGYHGLLE V K
Sbjct: 16  AIIPGLPDDLALKCLAKVSHGYHGLLEVVCK 46


Top