BLASTX nr result
ID: Zingiber24_contig00035801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035801
(322 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Popu... 117 1e-24
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera] 109 3e-22
ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helica... 108 6e-22
ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helica... 108 6e-22
emb|CBI36138.3| unnamed protein product [Vitis vinifera] 108 6e-22
ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica... 108 6e-22
ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citr... 106 4e-21
ref|XP_004306289.1| PREDICTED: probable ATP-dependent RNA helica... 105 6e-21
ref|XP_006655104.1| PREDICTED: probable ATP-dependent RNA helica... 105 8e-21
ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helica... 105 8e-21
ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helica... 105 8e-21
gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japo... 103 2e-20
gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indi... 103 2e-20
dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica G... 103 2e-20
gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group] 103 2e-20
ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helica... 103 2e-20
ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helica... 103 2e-20
ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago tr... 103 2e-20
gb|EMJ17255.1| hypothetical protein PRUPE_ppa017676mg [Prunus pe... 103 3e-20
gb|ESW07676.1| hypothetical protein PHAVU_010G149500g [Phaseolus... 102 5e-20
>ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| hypothetical protein
POPTR_0001s18290g [Populus trichocarpa]
Length = 918
Score = 117 bits (294), Expect = 1e-24
Identities = 60/106 (56%), Positives = 81/106 (76%), Gaps = 5/106 (4%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLH---EFLGTSSYRDEQ--GIKGSLAD 145
+E Y +FR+ LGPGNRRYIQTL+VL ++FLQ L + ++Y+ E+ K ++ D
Sbjct: 408 IEKYFTRFRNLLGPGNRRYIQTLMVLTRAFLQTLDNKKDLSNVNNYQAEEIAADKKAVCD 467
Query: 144 TSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
TS+ INDFLFSLNIDN+NLVKL +YIK+S ++HK+SGYG K+ASLQ
Sbjct: 468 TSIAINDFLFSLNIDNINLVKLLQYIKESNLVHKVSGYGEKVASLQ 513
>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 109 bits (273), Expect = 3e-22
Identities = 60/102 (58%), Positives = 75/102 (73%), Gaps = 5/102 (4%)
Frame = -2
Query: 300 YINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSY---RDEQGIKG--SLADTSM 136
Y+ +FR+ LGPGNRRYIQTL+V+ ++FLQ L TS D + G S +D+SM
Sbjct: 406 YLQRFRNFLGPGNRRYIQTLLVVARAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSSM 465
Query: 135 TINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASL 10
INDFLFSLNIDN+NLVKL YIK+S IIHK+SGYG K+A+L
Sbjct: 466 AINDFLFSLNIDNINLVKLLHYIKESNIIHKVSGYGDKVANL 507
>ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X2 [Citrus sinensis]
Length = 848
Score = 108 bits (271), Expect = 6e-22
Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQ----GIKGSLADT 142
LE Y +F S LGPGNRRYIQTL+V ++FLQ L + + R + G K + D+
Sbjct: 342 LEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAF-DS 400
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
S+ IN+FLFSLNIDN+NLVKL +YIK+S IIHK+SGYG K ASLQ
Sbjct: 401 SVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQ 445
>ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X1 [Citrus sinensis]
Length = 930
Score = 108 bits (271), Expect = 6e-22
Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQ----GIKGSLADT 142
LE Y +F S LGPGNRRYIQTL+V ++FLQ L + + R + G K + D+
Sbjct: 420 LEKYFGRFCSLLGPGNRRYIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKHAF-DS 478
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
S+ IN+FLFSLNIDN+NLVKL +YIK+S IIHK+SGYG K ASLQ
Sbjct: 479 SVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQ 523
>emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 108 bits (271), Expect = 6e-22
Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
Frame = -2
Query: 300 YINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSY---RDEQGIKG--SLADTSM 136
Y+ +FR+ LGPGNRRYIQTL+V+ ++FLQ L TS D + G S +D+SM
Sbjct: 350 YLQRFRNFLGPGNRRYIQTLLVVTRAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSSM 409
Query: 135 TINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
INDFLFSLNIDN+NLVKL YIK+S IIHK+SGYG K+A L+
Sbjct: 410 AINDFLFSLNIDNINLVKLLHYIKESNIIHKVSGYGDKVAYLR 452
>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 108 bits (271), Expect = 6e-22
Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
Frame = -2
Query: 300 YINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSY---RDEQGIKG--SLADTSM 136
Y+ +FR+ LGPGNRRYIQTL+V+ ++FLQ L TS D + G S +D+SM
Sbjct: 453 YLQRFRNFLGPGNRRYIQTLLVVTRAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSSM 512
Query: 135 TINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
INDFLFSLNIDN+NLVKL YIK+S IIHK+SGYG K+A L+
Sbjct: 513 AINDFLFSLNIDNINLVKLLHYIKESNIIHKVSGYGDKVAYLR 555
>ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citrus clementina]
gi|557528962|gb|ESR40212.1| hypothetical protein
CICLE_v10024822mg [Citrus clementina]
Length = 928
Score = 106 bits (264), Expect = 4e-21
Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQ----GIKGSLADT 142
LE Y +F S LGPGNRR+IQTL+V ++FLQ L + + R + G K +L D+
Sbjct: 416 LEKYFGRFCSLLGPGNRRHIQTLMVFTRAFLQVLLKEKDENDVRQDSENSTGAKNAL-DS 474
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
S+ IN+FLFSLNIDN+NLVKL +YIK+S IIHK+S YG K ASLQ
Sbjct: 475 SVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSRYGDKAASLQ 519
>ref|XP_004306289.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Fragaria
vesca subsp. vesca]
Length = 1168
Score = 105 bits (262), Expect = 6e-21
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDE------QGIKGSLA 148
+E Y +F + LGPGNRRYIQTL VL ++FL+ L + G + Y D K +
Sbjct: 404 IEKYFARFCNLLGPGNRRYIQTLTVLTRAFLRILLD--GDTGYDDSCHGTVTSAGKNDMP 461
Query: 147 DTSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLAS 13
+SM INDFLFSLNIDN+NLVKL YIK+S I+HKISGYG KLAS
Sbjct: 462 TSSMAINDFLFSLNIDNINLVKLLEYIKESNIMHKISGYGDKLAS 506
>ref|XP_006655104.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Oryza
brachyantha]
Length = 846
Score = 105 bits (261), Expect = 8e-21
Identities = 57/101 (56%), Positives = 74/101 (73%)
Frame = -2
Query: 321 ILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQGIKGSLADT 142
IL LE Y+N+F+S LG GNRRYIQTL VL+ SFLQ L ++ +D+ + + T
Sbjct: 355 ILSHLEAYLNRFQSVLGAGNRRYIQTLTVLVWSFLQVL------TNNKDD-----ACSMT 403
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKL 19
SMTIN FLFSL+IDN+N+VKL +Y+K+S IIHK+SGY KL
Sbjct: 404 SMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKL 444
>ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X2 [Cicer arietinum]
Length = 914
Score = 105 bits (261), Expect = 8e-21
Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKL-HEFLGTSSYRDEQGIKGSLADTSMT 133
+E Y +FR+ LGP NRRYIQTL+VLIQ+FL+ L +E G + + K S +MT
Sbjct: 409 VERYFVRFRNLLGPANRRYIQTLMVLIQAFLRVLLNEKDGKLIEQASEERKTS--GFTMT 466
Query: 132 INDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
INDFLF LNIDN+NLVKL +YIK+S I+HK+SGYG KLA+L+
Sbjct: 467 INDFLFELNIDNINLVKLVKYIKESNIMHKVSGYGEKLATLE 508
>ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X1 [Cicer arietinum]
Length = 1136
Score = 105 bits (261), Expect = 8e-21
Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKL-HEFLGTSSYRDEQGIKGSLADTSMT 133
+E Y +FR+ LGP NRRYIQTL+VLIQ+FL+ L +E G + + K S +MT
Sbjct: 404 VERYFVRFRNLLGPANRRYIQTLMVLIQAFLRVLLNEKDGKLIEQASEERKTS--GFTMT 461
Query: 132 INDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
INDFLF LNIDN+NLVKL +YIK+S I+HK+SGYG KLA+L+
Sbjct: 462 INDFLFELNIDNINLVKLVKYIKESNIMHKVSGYGEKLATLE 503
>gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japonica Group]
Length = 774
Score = 103 bits (258), Expect = 2e-20
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -2
Query: 321 ILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQGIKGSLADT 142
IL LE Y+N+F+S LG GNRRYIQTL VL +SFL+ L TS+ D + T
Sbjct: 282 ILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL-----TSNQDD------ACTMT 330
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKL 19
SMTIN FLFSL+IDN+N+VKL +Y+K+S IIHK+SGY KL
Sbjct: 331 SMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKL 371
>gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 103 bits (258), Expect = 2e-20
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -2
Query: 321 ILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQGIKGSLADT 142
IL LE Y+N+F+S LG GNRRYIQTL VL +SFL+ L TS+ D + T
Sbjct: 385 ILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL-----TSNQDD------ACTMT 433
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKL 19
SMTIN FLFSL+IDN+N+VKL +Y+K+S IIHK+SGY KL
Sbjct: 434 SMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKL 474
>dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 596
Score = 103 bits (258), Expect = 2e-20
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -2
Query: 321 ILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQGIKGSLADT 142
IL LE Y+N+F+S LG GNRRYIQTL VL +SFL+ L TS+ D + T
Sbjct: 104 ILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL-----TSNQDD------ACTMT 152
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKL 19
SMTIN FLFSL+IDN+N+VKL +Y+K+S IIHK+SGY KL
Sbjct: 153 SMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKL 193
>gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 103 bits (258), Expect = 2e-20
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -2
Query: 321 ILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSYRDEQGIKGSLADT 142
IL LE Y+N+F+S LG GNRRYIQTL VL +SFL+ L TS+ D + T
Sbjct: 353 ILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL-----TSNQDD------ACTMT 401
Query: 141 SMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKL 19
SMTIN FLFSL+IDN+N+VKL +Y+K+S IIHK+SGY KL
Sbjct: 402 SMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKL 442
>ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 103 bits (257), Expect = 2e-20
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 5/101 (4%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSY-----RDEQGIKGSLAD 145
+E Y +F S LGPGNRRYIQTLI++ ++ L+ LH + +SY D G G+L D
Sbjct: 396 MERYFERFCSLLGPGNRRYIQTLIIVTRALLKLLH--IEEASYVEPCQNDSTGKNGAL-D 452
Query: 144 TSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTK 22
SM INDFLFSLNIDN+N VKL +YIK+S I+HK+SGYG +
Sbjct: 453 YSMAINDFLFSLNIDNINFVKLLQYIKESNIMHKVSGYGER 493
>ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 103 bits (257), Expect = 2e-20
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 5/101 (4%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTSSY-----RDEQGIKGSLAD 145
+E Y +F S LGPGNRRYIQTLI++ ++ L+ LH + +SY D G G+L D
Sbjct: 410 MERYFERFCSLLGPGNRRYIQTLIIVTRALLKLLH--IEEASYVEPCQNDSTGKNGAL-D 466
Query: 144 TSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTK 22
SM INDFLFSLNIDN+N VKL +YIK+S I+HK+SGYG +
Sbjct: 467 YSMAINDFLFSLNIDNINFVKLLQYIKESNIMHKVSGYGER 507
>ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase
chl1 [Medicago truncatula]
Length = 1129
Score = 103 bits (257), Expect = 2e-20
Identities = 61/106 (57%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKL-HEFLGT--SSYRD-EQGIKGSLA-D 145
+E Y +FR+ LGP NRRYIQTL+VLIQ+FL+ L +E G S RD EQ + A D
Sbjct: 391 IERYFVRFRNLLGPANRRYIQTLMVLIQAFLRVLVNEKDGNLMDSCRDTEQASEERRASD 450
Query: 144 TSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
+M INDF+F LNIDN+NLVKL YIK+S I+HK+SGYG K+A+L+
Sbjct: 451 FTMAINDFVFELNIDNINLVKLLTYIKESNIMHKVSGYGEKMATLE 496
>gb|EMJ17255.1| hypothetical protein PRUPE_ppa017676mg [Prunus persica]
Length = 925
Score = 103 bits (256), Expect = 3e-20
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQ---KLHEFLGTSSYRDEQGIKGSLADTS 139
+E Y +F + LGPGNRRYIQTL+VL ++F Q K G S E+ S TS
Sbjct: 420 VEKYFERFCNVLGPGNRRYIQTLMVLTRAFRQVFLKDDRSYGDSCRATEKASGASGTSTS 479
Query: 138 -MTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQSH 1
M INDFLFSLN+DN+NLVKL +Y+K+S I+HK+SGYG K+AS Q +
Sbjct: 480 SMAINDFLFSLNVDNINLVKLLQYLKESNIMHKVSGYGDKVASFQKN 526
>gb|ESW07676.1| hypothetical protein PHAVU_010G149500g [Phaseolus vulgaris]
Length = 910
Score = 102 bits (254), Expect = 5e-20
Identities = 56/104 (53%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Frame = -2
Query: 309 LEFYINKFRSCLGPGNRRYIQTLIVLIQSFLQKLHEFLGTS---SYRDEQGIKGSLADTS 139
LE Y +FR+ LGP NRRYIQTL+VL Q+FL+ L + + S D +D +
Sbjct: 404 LEQYFGRFRNLLGPTNRRYIQTLMVLTQAFLRVLLDDKDGNLIDSCCDLAQASSIASDFT 463
Query: 138 MTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKISGYGTKLASLQ 7
M INDFLF NIDN+NLVKL +YIK+S I+HK+SGYG KLA+L+
Sbjct: 464 MAINDFLFEQNIDNINLVKLLKYIKESNIMHKVSGYGEKLATLE 507