BLASTX nr result
ID: Zingiber24_contig00035711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035711
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo... 105 5e-21
ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) ... 102 4e-20
ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigi... 100 3e-19
gb|ABD47279.1| hypothetical chloroplast RF15 [Lactuca sativa] gi... 99 5e-19
ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulga... 98 1e-18
ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macroc... 98 1e-18
emb|CAB88775.1| hypothetical protein [Spinacia oleracea] gi|7636... 94 2e-17
ref|YP_004841830.1| hypothetical chloroplast protein [Cucumis me... 93 3e-17
ref|YP_008992308.1| hypothetical protein Salmi_Mp043 (mitochondr... 89 6e-16
sp|Q1KXP9.1|YCF15_HELAN RecName: Full=Putative uncharacterized p... 89 6e-16
gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea] ... 87 2e-15
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris] 86 7e-15
ref|NP_043100.1| hypothetical protein ZemaCp099 [Zea mays] gi|50... 74 2e-11
ref|YP_003208240.1| hypothetical protein ColajoC_p078 [Coix lacr... 72 8e-11
ref|YP_052803.1| hypothetical protein OrniCp077 [Oryza nivara] g... 69 5e-10
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg... 69 5e-10
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 47 2e-09
ref|YP_004465234.1| hypothetical chloroplast RF15 [Jacobaea vulg... 59 3e-07
emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera] 42 5e-07
ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatu... 56 6e-06
>gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo]
gi|543383047|gb|AGV55582.1| hypothetical protein
(chloroplast) [Arbutus unedo]
Length = 63
Score = 105 bits (263), Expect = 5e-21
Identities = 51/61 (83%), Positives = 54/61 (88%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA IHVVYLK+VDL ASLMVQ SSR PF LGPQRQNVGLMPTVHHGRKDS +R
Sbjct: 2 RVQLHCIARIHVVYLKEVDLLASLMVQSSSRRAPFFLGPQRQNVGLMPTVHHGRKDSLSR 61
Query: 240 D 242
D
Sbjct: 62 D 62
>ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334701863|ref|YP_004564431.1| hypothetical
chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334089722|gb|AEG64605.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
gi|334089734|gb|AEG64617.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
Length = 63
Score = 102 bits (255), Expect = 4e-20
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA IHVVYLK+VDL ASL VQ SSR PFLLGPQRQNVGL PTVHHGRKDS +R
Sbjct: 2 RVQLHCIARIHVVYLKEVDLLASLTVQSSSRRAPFLLGPQRQNVGLTPTVHHGRKDSLSR 61
Query: 240 D 242
D
Sbjct: 62 D 62
>ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigida]
gi|470227769|ref|YP_007624855.1| Ycf15 protein
(chloroplast) [Artemisia frigida]
gi|401712244|gb|AFP98869.1| Ycf15 protein (chloroplast)
[Artemisia frigida] gi|401712257|gb|AFP98882.1| Ycf15
protein (chloroplast) [Artemisia frigida]
Length = 63
Score = 100 bits (248), Expect = 3e-19
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA IHVVYLK+VD ASL VQ SSR PFLLGPQRQNVGL PTVHHGRKDS +R
Sbjct: 2 RVQLHCIARIHVVYLKEVDPLASLTVQSSSRRAPFLLGPQRQNVGLAPTVHHGRKDSLSR 61
Query: 240 D 242
D
Sbjct: 62 D 62
>gb|ABD47279.1| hypothetical chloroplast RF15 [Lactuca sativa]
gi|88657042|gb|ABD47292.1| hypothetical chloroplast RF15
[Lactuca sativa]
Length = 63
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA IHVVYLK+VDL ASL VQ SSR PFLL PQRQNVGL PTVHHGRKDS +R
Sbjct: 2 RVQLHCIARIHVVYLKEVDLLASLTVQSSSRGAPFLLCPQRQNVGLAPTVHHGRKDSLSR 61
Query: 240 D 242
D
Sbjct: 62 D 62
>ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435088|ref|YP_004222306.1| hypothetical protein
BevumaM_p071 [Beta vulgaris subsp. maritima]
gi|9049279|dbj|BAA99289.1| orf146 [Beta vulgaris subsp.
vulgaris] gi|317905641|emb|CBJ14042.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|319439821|emb|CBJ17533.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|384977900|emb|CBL54124.1|
hypothetical protein (mitochondrion) [Beta vulgaris
subsp. maritima]
Length = 146
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3
Query: 45 IRIDTRIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRK 224
IRID R+QLHCIA I VVYLK ++ ASL+VQ SSR P LLGPQRQNVGL+PTVHHGR+
Sbjct: 80 IRIDMRVQLHCIARICVVYLKMINHLASLIVQSSSRRAPLLLGPQRQNVGLVPTVHHGRR 139
Query: 225 DSPNRD 242
DS +RD
Sbjct: 140 DSLSRD 145
>ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macrocarpa]
gi|345500097|emb|CBX24915.1| hypothetical protein [Beta
macrocarpa]
Length = 146
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3
Query: 45 IRIDTRIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRK 224
IRID R+QLHCIA I VVYLK ++ ASL+VQ SSR P LLGPQRQNVGL+PTVHHGR+
Sbjct: 80 IRIDMRVQLHCIARICVVYLKMINHLASLIVQSSSRRAPLLLGPQRQNVGLVPTVHHGRR 139
Query: 225 DSPNRD 242
DS +RD
Sbjct: 140 DSLSRD 145
>emb|CAB88775.1| hypothetical protein [Spinacia oleracea] gi|7636174|emb|CAB88796.1|
hypothetical protein [Spinacia oleracea]
Length = 63
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/61 (75%), Positives = 52/61 (85%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA I VVYLK+VDL ASL+VQ SSR LLGPQRQNVGL+PTVHHGR+DS +R
Sbjct: 2 RVQLHCIARICVVYLKEVDLLASLIVQSSSRRASLLLGPQRQNVGLVPTVHHGRRDSLSR 61
Query: 240 D 242
D
Sbjct: 62 D 62
>ref|YP_004841830.1| hypothetical chloroplast protein [Cucumis melo subsp. melo]
gi|346578253|ref|YP_004841844.1| hypothetical
chloroplast protein [Cucumis melo subsp. melo]
gi|344030539|gb|AEM76940.1| hypothetical chloroplast
protein [Cucumis melo subsp. melo]
gi|344030553|gb|AEM76954.1| hypothetical chloroplast
protein [Cucumis melo subsp. melo]
Length = 63
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNR 239
R+QLHCIA IHVVYLK+VDL ASLM+Q SS PFLL PQR+N GL+PTVHHGRKDS +
Sbjct: 2 RVQLHCIARIHVVYLKEVDLLASLMLQSSSHRAPFLLDPQRKNGGLVPTVHHGRKDSLSG 61
Query: 240 D 242
D
Sbjct: 62 D 62
>ref|YP_008992308.1| hypothetical protein Salmi_Mp043 (mitochondrion) [Salvia
miltiorrhiza] gi|534292282|gb|AGU16574.1| hypothetical
protein Salmi_Mp043 (mitochondrion) [Salvia
miltiorrhiza]
Length = 116
Score = 89.0 bits (219), Expect = 6e-16
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = +2
Query: 2 LPSRQRFTSVERLIHSDRHEDPTPLHCRNPCCIFEAG*PLCFSHGTTLFPLNPLSPRSTE 181
LPSRQRFT ER+IHSDRHE PT L + L S ++ +P SPR TE
Sbjct: 32 LPSRQRFTYAERMIHSDRHESPTALPESMLYIFYLKEVDLLAS---LVYTPSPFSPRPTE 88
Query: 182 TKCRTDANSSSRKKGLTEPGSLTN 253
TKCRT ANSSSRKKGLT+PGSLTN
Sbjct: 89 TKCRTGANSSSRKKGLTKPGSLTN 112
>sp|Q1KXP9.1|YCF15_HELAN RecName: Full=Putative uncharacterized protein ycf15
gi|88656941|gb|ABD47192.1| hypothetical chloroplast RF15
[Helianthus annuus] gi|88656954|gb|ABD47205.1|
hypothetical chloroplast RF15 [Helianthus annuus]
Length = 53
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHH 215
R+QLHCIA IHVVYLK+VDL ASL VQ SSR PFLLGPQRQNVGL PTVHH
Sbjct: 2 RVQLHCIARIHVVYLKEVDLLASLTVQSSSRRAPFLLGPQRQNVGLPPTVHH 53
>gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea]
gi|157056820|gb|ABV02410.1| hypothetical chloroplast
RF15 [Ipomoea purpurea]
Length = 56
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +3
Query: 78 IAGIHVVYLKQVDLFASLMVQPSSR*TPFLLGPQRQNVGLMPTVHHGRKDSPNRD 242
+A IHVVYLK+VDL ASL+V SSR PFLLGPQRQNVGL+PTVHHGRKDS +RD
Sbjct: 1 MARIHVVYLKEVDLLASLLVHFSSRRAPFLLGPQRQNVGLVPTVHHGRKDSLSRD 55
>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
Length = 174
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/63 (71%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Frame = +2
Query: 74 LHCRNPCC--IFEAG*PLCFSHGTTLFPLNPLSPRSTETKCRTDANSSSRKKGLTEPGSL 247
LHC C IFE CFSH T LFP +P SPRSTETKCR ANSSSRKKGLTEPGSL
Sbjct: 12 LHCIARICVVIFENDKSPCFSHRTILFPTSPPSPRSTETKCRAGANSSSRKKGLTEPGSL 71
Query: 248 TNT 256
TNT
Sbjct: 72 TNT 74
>ref|NP_043100.1| hypothetical protein ZemaCp099 [Zea mays]
gi|50812584|ref|YP_054685.1| hypothetical protein
SaofCp079 [Saccharum hybrid cultivar NCo 310]
gi|50812607|ref|YP_054708.1| hypothetical protein
SaofCp102 [Saccharum hybrid cultivar NCo 310]
gi|902297|emb|CAA60361.1| hypothetical protein [Zea
mays] gi|49659568|dbj|BAD27349.1| hypothetical protein
[Saccharum hybrid cultivar NCo 310]
gi|49659591|dbj|BAD27372.1| hypothetical protein
[Saccharum hybrid cultivar NCo 310]
Length = 58
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +2
Query: 2 LPSRQRFTSVERLIHSDRHEDPTPLHCRNPCCIFEAG 112
LP+RQR TSVERLIHSDR+EDPTPLHC+NPC IFEAG
Sbjct: 22 LPNRQRLTSVERLIHSDRYEDPTPLHCQNPCSIFEAG 58
>ref|YP_003208240.1| hypothetical protein ColajoC_p078 [Coix lacryma-jobi]
gi|260677401|ref|YP_003208261.1| hypothetical protein
ColajoC_p099 [Coix lacryma-jobi]
gi|209361330|gb|ACI43245.1| unknown [Coix lacryma-jobi]
gi|209361339|gb|ACI43254.1| unknown [Coix lacryma-jobi]
Length = 58
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +2
Query: 2 LPSRQRFTSVERLIHSDRHEDPTPLHCRNPCCIFEAG 112
LP+RQR T VERLIHSDR+EDPTPLHC+NPC IFEAG
Sbjct: 22 LPNRQRLTYVERLIHSDRYEDPTPLHCQNPCSIFEAG 58
>ref|YP_052803.1| hypothetical protein OrniCp077 [Oryza nivara]
gi|50234052|ref|YP_052829.1| hypothetical protein
OrniCp103 [Oryza nivara]
gi|556927137|ref|YP_008757491.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|556927165|ref|YP_008757519.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|49615050|dbj|BAD26833.1| unnamed protein product
[Oryza nivara] gi|49615076|dbj|BAD26859.1| unnamed
protein product [Oryza nivara]
gi|552954529|gb|AGY48997.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|552954557|gb|AGY49025.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
Length = 85
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 2 LPSRQRFTSVERLIHSDRHEDPTPLHCRNPCCIFEAG 112
LP+RQR TSVERLIHSDR+EDPT LHC+NPC IFE G
Sbjct: 49 LPNRQRLTSVERLIHSDRYEDPTTLHCQNPCSIFEEG 85
>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
protein BevumaM_p070 [Beta vulgaris subsp. maritima]
gi|346683178|ref|YP_004842110.1| hypothetical protein
BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
orf114a [Beta vulgaris subsp. vulgaris]
gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 114
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = -2
Query: 258 LVLVSDPGSVSPFFRDELLASVLHFVSVDRGERGFSGKRVV 136
LVLVSDPGSVSPFFRDELLA HFVSVDRGE G GKR+V
Sbjct: 73 LVLVSDPGSVSPFFRDELLAPARHFVSVDRGEGGLVGKRIV 113
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 162 FLLGPQRQNVGLMPTVHHGRKDSPNRDR 245
FLLGPQRQNVGL+PTVHH RK+ N +
Sbjct: 34 FLLGPQRQNVGLVPTVHHERKEFSNEKK 61
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +1
Query: 58 RGSNSIALPESMLYI*SRLTSLLLSWYNPL 147
R N IALPE + YI RLTSLLLS YNPL
Sbjct: 2 RVPNRIALPEPVFYIGKRLTSLLLSCYNPL 31
>ref|YP_004465234.1| hypothetical chloroplast RF15 [Jacobaea vulgaris]
gi|334702386|ref|YP_004465248.1| hypothetical
chloroplast RF15 [Jacobaea vulgaris]
gi|308156130|gb|ADO15458.1| hypothetical chloroplast
RF15 [Jacobaea vulgaris] gi|308156144|gb|ADO15472.1|
hypothetical chloroplast RF15 [Jacobaea vulgaris]
Length = 44
Score = 59.3 bits (142), Expect(2) = 3e-07
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLMVQPSSR*TPFLL 170
R+QLHCIAGIHV+YLK+VDL A L VQ SSR PFLL
Sbjct: 2 RVQLHCIAGIHVIYLKEVDLLAFLTVQSSSRRAPFLL 38
Score = 20.8 bits (42), Expect(2) = 3e-07
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 160 PFSSVHRDKM 189
PF VHRDKM
Sbjct: 35 PFLLVHRDKM 44
>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
Length = 142
Score = 42.4 bits (98), Expect(3) = 5e-07
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 194 TDANSSSRKKGLTEPGSLTNT 256
T ANSSSRKKGLTEPGSLTNT
Sbjct: 29 TGANSSSRKKGLTEPGSLTNT 49
Score = 34.3 bits (77), Expect(3) = 5e-07
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 60 RIQLHCIAGIHVVYLKQVDLFASLM 134
R+QLHCI IHVVYLK+ L + L+
Sbjct: 2 RVQLHCIVRIHVVYLKEKRLTSLLL 26
Score = 21.9 bits (45), Expect(3) = 5e-07
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 109 RLTSLLLSW 135
RLTSLLLSW
Sbjct: 20 RLTSLLLSW 28
>ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatula]
gi|355497904|gb|AES79107.1| 30S ribosomal protein S12
[Medicago truncatula]
Length = 195
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = +1
Query: 34 KTDSFGSTRGSNSIALPESMLYI*SRLTSLLLSWYNPLPA 153
K DSF ST SN IALP+SMLYI RLTSLLL WYNPL A
Sbjct: 21 KDDSFRSTSESNHIALPKSMLYI-KRLTSLLLGWYNPLAA 59