BLASTX nr result
ID: Zingiber24_contig00035710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035710
(1220 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [A... 245 2e-62
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 224 4e-56
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 188 3e-45
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 186 1e-44
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob... 186 2e-44
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 184 5e-44
gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [... 180 1e-42
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 177 1e-41
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 176 1e-41
gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis] 176 2e-41
gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlise... 175 3e-41
gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa] 175 3e-41
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 175 3e-41
ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 171 6e-40
ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 169 2e-39
ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 169 2e-39
ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 169 2e-39
ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 169 2e-39
ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 167 6e-39
gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aes... 167 8e-39
>ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
gi|548832465|gb|ERM95251.1| hypothetical protein
AMTR_s02071p00004290 [Amborella trichopoda]
Length = 140
Score = 245 bits (626), Expect = 2e-62
Identities = 130/149 (87%), Positives = 133/149 (89%)
Frame = -3
Query: 465 MESVRLEHENMIDLVLVTLRYGVE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDS 286
MESV+LEHEN +LVLVT R GVE GRRFS+EEKDPI SKELNEEPYE SDS
Sbjct: 1 MESVQLEHENATELVLVTPRDGVEEGRRFSSEEKDPITSKELNEEPYE---------SDS 51
Query: 285 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 106
KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVKD
Sbjct: 52 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKD 111
Query: 105 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
LPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 112 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 140
>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 127
Score = 224 bits (572), Expect = 4e-56
Identities = 115/127 (90%), Positives = 119/127 (93%)
Frame = -3
Query: 399 VE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRK 220
+E GRRFSNEEKDP+ SKELNEEPYEV+ S TVL S KGDLSVNFSTITPKKPNSALRK
Sbjct: 1 MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60
Query: 219 VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQ 40
VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQ
Sbjct: 61 VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQ 120
Query: 39 QGRSSAL 19
QGRSSAL
Sbjct: 121 QGRSSAL 127
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 188 bits (478), Expect = 3e-45
Identities = 99/117 (84%), Positives = 100/117 (85%)
Frame = -3
Query: 384 RFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVR 205
RFSNEEKDPI SKELNE+ K DLSVNFSTITPKKPNSALRKVARVR
Sbjct: 61 RFSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVR 105
Query: 204 LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG 34
LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG
Sbjct: 106 LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG 162
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 186 bits (473), Expect = 1e-44
Identities = 96/101 (95%), Positives = 96/101 (95%)
Frame = -3
Query: 321 VKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 142
V SCTVL S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEH
Sbjct: 37 VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 96
Query: 141 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 97 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 137
>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
gi|350996664|gb|AEQ37174.1| ribosomal protein S12
(chloroplast) [Ginkgo biloba]
Length = 141
Score = 186 bits (471), Expect = 2e-44
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = -3
Query: 321 VKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 142
V SCTVL S KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH
Sbjct: 37 VYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 96
Query: 141 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL*ILI 7
SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL I+I
Sbjct: 97 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSALYIII 141
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 184 bits (468), Expect = 5e-44
Identities = 96/121 (79%), Positives = 102/121 (84%)
Frame = -3
Query: 387 RRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARV 208
+ FSNE+KDP+ KELNE+ K DLSVNFSTITPKKPNSALRKVARV
Sbjct: 54 KEFSNEKKDPMTWKELNED---------------KDDLSVNFSTITPKKPNSALRKVARV 98
Query: 207 RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 28
RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGR+
Sbjct: 99 RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRT 158
Query: 27 S 25
+
Sbjct: 159 A 159
>gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [Phaseolus
vulgaris]
Length = 92
Score = 180 bits (456), Expect = 1e-42
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 60
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 117
Score = 177 bits (448), Expect = 1e-41
Identities = 93/115 (80%), Positives = 100/115 (86%)
Frame = -3
Query: 444 HENMIDLVLVTLRYGVE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVN 265
+EN+ +LV VTLR G+E GRRFSNEEKDP+ SKELNEEPYEVK S TVL S SKGDLSVN
Sbjct: 2 NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61
Query: 264 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLP 100
FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVV V G ++ P
Sbjct: 62 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVFVGGEGLRIYP 116
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 176 bits (447), Expect = 1e-41
Identities = 89/95 (93%), Positives = 91/95 (95%)
Frame = -3
Query: 312 SCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVV 133
+CT + S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVV
Sbjct: 33 TCTRVYSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 92
Query: 132 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 28
LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 93 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 127
>gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]
Length = 158
Score = 176 bits (445), Expect = 2e-41
Identities = 88/89 (98%), Positives = 89/89 (100%)
Frame = -3
Query: 285 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 106
+GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD
Sbjct: 17 QGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 76
Query: 105 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
LPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 77 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 105
>gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlisea aurea]
Length = 92
Score = 175 bits (444), Expect = 3e-41
Identities = 89/92 (96%), Positives = 89/92 (96%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS VLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 60
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa]
Length = 89
Score = 175 bits (444), Expect = 3e-41
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 282 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 103
GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL
Sbjct: 2 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 61
Query: 102 PGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
PGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 62 PGVRYHIVRGTLDAVGVKDRQQGRSSAL 89
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 175 bits (444), Expect = 3e-41
Identities = 89/92 (96%), Positives = 89/92 (96%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS VLVRGGR
Sbjct: 43 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 102
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 103 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 134
>ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Glycine
max]
Length = 169
Score = 171 bits (433), Expect = 6e-40
Identities = 87/91 (95%), Positives = 87/91 (95%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLSVNFSTITPKKPNSALRKVARVRLT GFEITAYIPGI HNLQEHSVVLVRGGR
Sbjct: 64 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTFGFEITAYIPGIDHNLQEHSVVLVRGGR 123
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSA 22
VKDLPGV YHIVRGTLDAVGVKDRQQGRSSA
Sbjct: 124 VKDLPGVTYHIVRGTLDAVGVKDRQQGRSSA 154
>ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 95
Score = 169 bits (429), Expect = 2e-39
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = -3
Query: 291 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 112
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 5 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 64
Query: 111 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 65 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 95
>ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 94
Score = 169 bits (429), Expect = 2e-39
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = -3
Query: 291 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 112
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 4 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 63
Query: 111 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 64 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 94
>ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 93
Score = 169 bits (429), Expect = 2e-39
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = -3
Query: 291 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 112
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 3 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 62
Query: 111 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 63 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 93
>ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 115
Score = 169 bits (428), Expect = 2e-39
Identities = 85/92 (92%), Positives = 86/92 (93%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLS+N STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHN QEH VVLVRGGR
Sbjct: 24 SGSKGDLSINLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 83
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
VKDLPGVRYHIVRGTLDAVGVKD QQGRSSAL
Sbjct: 84 VKDLPGVRYHIVRGTLDAVGVKDHQQGRSSAL 115
>ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 162
Score = 167 bits (424), Expect = 6e-39
Identities = 85/92 (92%), Positives = 85/92 (92%)
Frame = -3
Query: 294 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 115
S SKGDLSVN STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHN QEH VVLVRGGR
Sbjct: 71 SGSKGDLSVNLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 130
Query: 114 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
VKDLPGVRYHIVRGTLD VGVKD QQGRSSAL
Sbjct: 131 VKDLPGVRYHIVRGTLDPVGVKDHQQGRSSAL 162
>gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aestivum]
Length = 133
Score = 167 bits (423), Expect = 8e-39
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = -3
Query: 288 SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 109
SKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK
Sbjct: 44 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 103
Query: 108 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 19
DLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 104 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 133