BLASTX nr result

ID: Zingiber24_contig00035681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035681
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388707.1| hypothetical protein POPTR_0115s002502g, par...    57   2e-06
ref|XP_002302908.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    57   3e-06

>ref|XP_006388707.1| hypothetical protein POPTR_0115s002502g, partial [Populus
           trichocarpa] gi|550310689|gb|ERP47621.1| hypothetical
           protein POPTR_0115s002502g, partial [Populus
           trichocarpa]
          Length = 697

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%)
 Frame = -3

Query: 300 DDDGRHVTECTMHDLMHDLARSISEDEFYNDVDDGKKDIQKRTYHIWLKYEEISNTSLFK 121
           +DDG     C MHDLMHDLA+SI+  E Y    DG+ +I     H+   Y  +  TSL K
Sbjct: 86  EDDGFGNITCKMHDLMHDLAQSIAAQECYTTKGDGELEIPNTVRHVAFNYRRV--TSLEK 143

Query: 120 MPLYLRTLSLRSCLS 76
               L   SLRSCLS
Sbjct: 144 K--LLNVQSLRSCLS 156


>ref|XP_002302908.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 970

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%)
 Frame = -3

Query: 300 DDDGRHVTECTMHDLMHDLARSISEDEFYNDVDDGKKDIQKRTYHIWLKYEEISNTSLFK 121
           +DDG     C MHDLMHDLA+SI+  E Y    DG+ +I     H+   Y  +  TSL K
Sbjct: 359 EDDGFGNITCKMHDLMHDLAQSIAAQECYTTKGDGELEIPNTVRHVAFNYRRV--TSLEK 416

Query: 120 MPLYLRTLSLRSCLS 76
               L   SLRSCLS
Sbjct: 417 K--LLNVQSLRSCLS 429


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|566210834|ref|XP_006372493.1| hypothetical protein
           POPTR_0017s02170g [Populus trichocarpa]
           gi|550319119|gb|ERP50290.1| hypothetical protein
           POPTR_0017s02170g [Populus trichocarpa]
          Length = 1075

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -3

Query: 297 DDGRHVTECTMHDLMHDLARSISEDEFYNDVDDGKKDIQKRTYHIWLKYEEIS--NTSLF 124
           DDG     C MHDLMHDLA+SI+E E Y    DGK +I K   H+    + ++  N S+ 
Sbjct: 476 DDGFGNITCKMHDLMHDLAQSIAEQECYMTEGDGKLEIPKTVRHVAFYNKSVAFYNKSVA 535

Query: 123 KMPLYLRTLSLRSCL 79
                L+ LSLRS L
Sbjct: 536 SSSEVLKVLSLRSLL 550


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