BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035593
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Popu...    70   2e-10
ref|XP_004308290.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_002528862.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group] g...    63   4e-08
ref|XP_006646425.1| PREDICTED: putative pentatricopeptide repeat...    63   5e-08
ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indi...    62   1e-07
ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
gb|EOY07940.1| Tetratricopeptide repeat-like superfamily protein...    61   2e-07
gb|EOX99576.1| Tetratricopeptide repeat-like superfamily protein...    61   2e-07
ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006847671.1| hypothetical protein AMTR_s00149p00040370 [A...    59   9e-07
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_006847830.1| hypothetical protein AMTR_s00029p00051540 [A...    57   2e-06
ref|XP_004500336.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
emb|CBI38781.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    57   2e-06
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...    57   3e-06

>ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Populus trichocarpa]
           gi|550337026|gb|EEE92095.2| hypothetical protein
           POPTR_0006s24730g [Populus trichocarpa]
          Length = 602

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/112 (36%), Positives = 59/112 (52%)
 Frame = -3

Query: 343 QTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLA 164
           Q HAR++V              +  A   PS+P  Y  +++  I  PNVFASNN++RC A
Sbjct: 15  QAHARIIVSGLAGKASLMGHILSFLATF-PSSPFDYSLSIYRTIKNPNVFASNNMIRCFA 73

Query: 163 RSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIICEGAQLH 8
           +S+         +   YS + R  +  NNY+F FLLQACS+   + EG Q+H
Sbjct: 74  KSDLPL-----QSLVLYSSVLRNCVRPNNYSFTFLLQACSKGLGLVEGVQVH 120


>ref|XP_004308290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 606

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/87 (45%), Positives = 52/87 (59%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           +LS S P  Y  +L+ +I  P VFASNN++RC + S     +P H    + S L R   P
Sbjct: 43  SLSSSPPFPYSLSLYHSIPSPTVFASNNMIRCFSHSP----SPPHSLLLYSSMLLRHAKP 98

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLHS 5
            NNYTF FLLQACS    + EGAQ+H+
Sbjct: 99  -NNYTFTFLLQACSVASALPEGAQVHA 124


>ref|XP_002528862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531713|gb|EEF33536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 374

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/86 (39%), Positives = 49/86 (56%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           ALSP     Y  +++ +I  P+VFASNN++RC ++SE        ++  FYS + R  I 
Sbjct: 66  ALSPENQFHYSYSVYQSIKNPSVFASNNMIRCFSKSELPL-----ESVVFYSSMLRRFIR 120

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLH 8
            NNY+F FL Q C +     EG Q+H
Sbjct: 121 PNNYSFTFLFQGCGKGLGFIEGVQIH 146


>ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
           gi|20161481|dbj|BAB90405.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|56785052|dbj|BAD82691.1| PPR repeat containing
           protein-like [Oryza sativa Japonica Group]
           gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa
           Japonica Group]
          Length = 604

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 SAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIPT-NN 77
           +APS Y R LF  I  P  F  N+L+R L+ +    AAPA D    Y R+ R G P  N+
Sbjct: 75  AAPS-YARNLFDQIPEPTAFCYNSLIRALSSAA--GAAPAADTVLVYRRMLRAGSPLPNS 131

Query: 76  YTFPFLLQACSRRPIICEGAQLHSQ 2
           +T  F L+ACS  P + EG QLHSQ
Sbjct: 132 FTLAFALKACSVVPALGEGRQLHSQ 156


>ref|XP_006646425.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Oryza brachyantha]
          Length = 593

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 SPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP-T 83
           S  A + Y R LF  I  P  F  N+L+R L+ +   +  PA DA   Y RL R G P  
Sbjct: 62  SCGAAASYARNLFDQIPEPTAFCYNSLIRTLSAA---SGVPAADAVLVYRRLLRAGSPHP 118

Query: 82  NNYTFPFLLQACSRRPIICEGAQLHSQ 2
           N++T  F+L+AC+  P + EG QLHSQ
Sbjct: 119 NSFTLAFVLKACAAVPALGEGRQLHSQ 145


>ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/77 (40%), Positives = 48/77 (62%)
 Frame = -3

Query: 271 CAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTG 92
           CAA        YFR LFA I  P+ FA N ++R    +    ++P+H A  F++++ + G
Sbjct: 32  CAATPSPKCLSYFRALFAYIPSPDTFAYNTIIRAHVAAH---SSPSH-AISFFTQMRQQG 87

Query: 91  IPTNNYTFPFLLQACSR 41
           +P +N+TFPFLL+AC+R
Sbjct: 88  VPPDNFTFPFLLKACAR 104


>gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
          Length = 565

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 SAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIPT-NN 77
           +APS Y R LF  I  P  F  N+L+R L+ +     APA D    Y R+ R G P  N+
Sbjct: 72  AAPS-YARNLFDQIPEPTAFCYNSLIRALSSAA--GVAPAADTVLVYRRMLRAGSPLPNS 128

Query: 76  YTFPFLLQACSRRPIICEGAQLHSQ 2
           +T  F L+ACS  P + EG QLHSQ
Sbjct: 129 FTLAFALKACSVVPALGEGRQLHSQ 153


>ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449479547|ref|XP_004155632.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = -3

Query: 343 QTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLA 164
           Q HAR++V              A  A  S S PS Y  +++ +I  P VFA+NN++RC  
Sbjct: 49  QAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFV 108

Query: 163 RSEDDAAAPAHDAFRFYSRLHRTGIPT-NNYTFPFLLQACSRRPIICEGAQLHS 5
           + +     P H +   YS + R+ +   N +T  F+LQACS    I EGAQ+ +
Sbjct: 109 KGD----LPRH-SISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQT 157


>gb|EOY07940.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 756

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/113 (31%), Positives = 53/113 (46%)
 Frame = -3

Query: 343 QTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLA 164
           Q HA++++              +  A L   A   Y + LF  I+ PN F  N ++R  +
Sbjct: 62  QVHAQIILNGYHHQFFPISRLISFFALLGSRAGLDYSQILFCQIEHPNQFMYNTMIRGFS 121

Query: 163 RSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIICEGAQLHS 5
            SE     P      + S LH+   P NN+TFPFLL +C+R   +  G Q+HS
Sbjct: 122 HSE----FPEKALIFYSSMLHQENRPPNNFTFPFLLNSCARLSTLKPGIQVHS 170


>gb|EOX99576.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 558

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/116 (34%), Positives = 60/116 (51%)
 Frame = -3

Query: 352 HLLQTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLR 173
           ++ + HARL+                 CAA +P + S Y R LFA I  P+ FA N L+R
Sbjct: 3   NVYKLHARLIKTGLQNDPLSLRPLLLSCAASAPESLS-YARCLFARIPSPDTFAYNTLIR 61

Query: 172 CLARSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIICEGAQLHS 5
             A S      P+H A   +S +HR G+  +++TFPF+ +AC+R  I   G + H+
Sbjct: 62  AHAHS-----FPSH-AVSLFSAMHRGGLSPDHFTFPFVFKACARLQI---GLETHA 108


>ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Brachypodium distachyon]
          Length = 622

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/112 (33%), Positives = 51/112 (45%)
 Frame = -3

Query: 343 QTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLA 164
           + HAR V               A CA  S      Y   +FAA+D P  F  N L+R   
Sbjct: 60  KAHARHVKLGLDRSPRHARPLLAACALGSWPGGMEYAAAIFAALDEPEAFDYNTLMRGHV 119

Query: 163 RSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIICEGAQLH 8
             +D AAA      R Y+ +   G+  + YTFPF+L+AC+R     +G QLH
Sbjct: 120 AHDDPAAA-----LRLYAAMLEQGVEPDRYTFPFVLKACARLAASGQGRQLH 166


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/88 (36%), Positives = 53/88 (60%)
 Frame = -3

Query: 268 AALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGI 89
           +A+S S    Y  +LF +I+ PN+F  N+++R L+ S   A A       F+ R+  +G+
Sbjct: 71  SAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALV-----FFVRMIYSGV 125

Query: 88  PTNNYTFPFLLQACSRRPIICEGAQLHS 5
             N+YTFPFLL++C++     EG Q+H+
Sbjct: 126 EPNSYTFPFLLKSCAKLASAHEGKQIHA 153


>ref|XP_006847671.1| hypothetical protein AMTR_s00149p00040370 [Amborella trichopoda]
           gi|548850940|gb|ERN09252.1| hypothetical protein
           AMTR_s00149p00040370 [Amborella trichopoda]
          Length = 169

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           ALS      Y R +FA I  PN++  N ++R   +S + +     +AF  Y +L   G+ 
Sbjct: 46  ALSNYGSLDYARRIFALIKSPNIYIWNTIIRGYVQSSNPS-----EAFALYKKLLSKGLI 100

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLHS 5
            NNYTFPFLL+AC++   +  G+ +H+
Sbjct: 101 PNNYTFPFLLKACTQLVYLNIGSSIHA 127


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           +LS      + RTLF  I +PNVF+ N + R  +RS   A     +    Y+ + R G  
Sbjct: 70  SLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPA-----ETIALYNLMLRNGTL 124

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLHS 5
            +NY+FPF+L+AC+R  ++ +G ++HS
Sbjct: 125 PDNYSFPFVLKACARLSLLHKGREIHS 151


>ref|XP_006847830.1| hypothetical protein AMTR_s00029p00051540 [Amborella trichopoda]
           gi|548851135|gb|ERN09411.1| hypothetical protein
           AMTR_s00029p00051540 [Amborella trichopoda]
          Length = 181

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/115 (30%), Positives = 58/115 (50%)
 Frame = -3

Query: 349 LLQTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRC 170
           L Q HA +++              A CA +SP A   + + +FA I  P++F  N+++R 
Sbjct: 27  LKQIHAHIIIQGLSRSNFTGSRLIAFCA-VSPYASIDHAKLIFAQIQEPSIFTWNSMIRG 85

Query: 169 LARSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIICEGAQLHS 5
           L+ S +       +A  FYS+L       NN+TFPF+++AC+    +  G  LH+
Sbjct: 86  LSMSSNPK-----EAIVFYSQLLCKNTQPNNFTFPFVIKACTEAAAVETGLLLHN 135


>ref|XP_004500336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cicer arietinum]
          Length = 548

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/106 (33%), Positives = 53/106 (50%)
 Frame = -3

Query: 343 QTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLA 164
           QTHARLVV               +  +   S+P  Y  ++F +I  P VFA N+++RC A
Sbjct: 43  QTHARLVVLGQSQSRLILHILSLLSLS---SSPLNYCLSIFNSISFPTVFAFNSIIRCHA 99

Query: 163 RSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACSRRPIIC 26
           +S    +    ++   YS + R  +  NN+TF FLL AC++    C
Sbjct: 100 KSNSSPS----NSLSLYSLMRRRFLKPNNHTFTFLLNACTKSISTC 141


>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 47/88 (53%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           ALS S    Y R LF  +  P+ F  N ++R  ARS++      ++A   Y  +   G+P
Sbjct: 54  ALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNP-----YEAVSLYYFMVERGVP 108

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLHSQ 2
            +NYT+PF+L AC+R   +  G + H +
Sbjct: 109 VDNYTYPFVLAACARLGAVKLGRRFHCE 136


>ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 47/88 (53%)
 Frame = -3

Query: 265 ALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRTGIP 86
           ALS S    Y R LF  +  P+ F  N ++R  ARS++      ++A   Y  +   G+P
Sbjct: 54  ALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNP-----YEAVSLYYFMVERGVP 108

Query: 85  TNNYTFPFLLQACSRRPIICEGAQLHSQ 2
            +NYT+PF+L AC+R   +  G + H +
Sbjct: 109 VDNYTYPFVLAACARLGAVKLGRRFHCE 136


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/102 (35%), Positives = 50/102 (49%)
 Frame = -3

Query: 349 LLQTHARLVVXXXXXXXXXXXXXXAVCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRC 170
           L Q HA++++              + CA LS S    Y   LF +I  PN+F  N ++R 
Sbjct: 65  LKQIHAQMILTSRISDHFAASRLLSFCA-LSNSRDINYAIKLFKSIQDPNIFMWNTIIRA 123

Query: 169 LARSEDDAAAPAHDAFRFYSRLHRTGIPTNNYTFPFLLQACS 44
           LA S +        A  FY ++ R G+  N YTFPFLL+ CS
Sbjct: 124 LANSSNP-----DQALFFYIQMLRLGVCPNKYTFPFLLKGCS 160


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/90 (34%), Positives = 47/90 (52%)
 Frame = -3

Query: 274 VCAALSPSAPSRYFRTLFAAIDRPNVFASNNLLRCLARSEDDAAAPAHDAFRFYSRLHRT 95
           + + +S SAP  Y   +F  I  PN+F  N ++R  A SE+   A        Y RLH  
Sbjct: 80  IYSIVSVSAPMTYAHNIFTLIQNPNIFTWNTMIRGHAESENPKPA-----IELYHRLHFN 134

Query: 94  GIPTNNYTFPFLLQACSRRPIICEGAQLHS 5
            I  + +T+PFLL+A S+   +  G ++HS
Sbjct: 135 SIEPDTHTYPFLLKAVSKMVNVRVGEKIHS 164