BLASTX nr result

ID: Zingiber24_contig00035590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035590
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444411.1| hypothetical protein SORBIDRAFT_07g021540 [S...    56   6e-06
gb|EAZ07122.1| hypothetical protein OsI_29369 [Oryza sativa Indi...    55   1e-05

>ref|XP_002444411.1| hypothetical protein SORBIDRAFT_07g021540 [Sorghum bicolor]
           gi|241940761|gb|EES13906.1| hypothetical protein
           SORBIDRAFT_07g021540 [Sorghum bicolor]
          Length = 418

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = -3

Query: 179 MPDRILVCFRXXXXXXXGPSVPSLTTSVYETCLGVACLTWSRDALGVSLCAVLR 18
           MP  I  CFR       G + PSL TSVYET LG+  L+WSR +LG+SL AVLR
Sbjct: 1   MPSPIAACFRCAAAPSSGAAGPSLATSVYETHLGLVALSWSRTSLGLSLRAVLR 54


>gb|EAZ07122.1| hypothetical protein OsI_29369 [Oryza sativa Indica Group]
          Length = 402

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -3

Query: 179 MPDRILVCFRXXXXXXXG---PSVPSLTTSVYETCLGVACLTWSRDALGVSLCAVLRFYA 9
           MP  I  CFR           P+ PSL TSVYET LG+A L+W+R +LG+SL AVLR  +
Sbjct: 1   MPSAIAACFRCAPSAAAAASGPAGPSLATSVYETHLGLAALSWTRTSLGLSLRAVLRLSS 60

Query: 8   DA 3
            A
Sbjct: 61  PA 62


Top