BLASTX nr result
ID: Zingiber24_contig00035583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035583
(766 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529149.1| ATP-dependent Clp protease adaptor protein c... 49 2e-07
gb|ESW25349.1| hypothetical protein PHAVU_003G028500g [Phaseolus... 48 2e-07
ref|XP_002311446.1| hypothetical protein POPTR_0008s11660g [Popu... 50 3e-07
gb|EXC06060.1| ATP-dependent Clp protease adapter protein ClpS [... 49 3e-07
ref|XP_002315955.2| hypothetical protein POPTR_0010s13860g [Popu... 50 4e-07
gb|EOY02119.1| Ribosomal protein L12/ ATP-dependent Clp protease... 51 4e-07
ref|NP_001235414.1| uncharacterized protein LOC100500511 [Glycin... 50 4e-07
ref|XP_004512946.1| PREDICTED: ATP-dependent Clp protease adapte... 48 6e-07
gb|AFK41868.1| unknown [Medicago truncatula] 48 6e-07
ref|XP_006484423.1| PREDICTED: uncharacterized protein LOC102625... 50 6e-07
ref|XP_006484424.1| PREDICTED: uncharacterized protein LOC102625... 50 6e-07
ref|XP_006437722.1| hypothetical protein CICLE_v10032968mg [Citr... 50 6e-07
gb|EOY02120.1| Ribosomal protein L12/ ATP-dependent Clp protease... 51 6e-07
ref|XP_006437721.1| hypothetical protein CICLE_v10032968mg [Citr... 50 6e-07
ref|XP_006341627.1| PREDICTED: uncharacterized protein LOC102601... 50 8e-07
ref|XP_004235826.1| PREDICTED: ATP-dependent Clp protease adapte... 50 8e-07
ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte... 49 8e-07
ref|NP_564937.1| protein ClpS1 [Arabidopsis thaliana] gi|5734712... 49 2e-06
ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab... 49 2e-06
ref|XP_006391113.1| hypothetical protein EUTSA_v10019264mg [Eutr... 49 2e-06
>ref|XP_002529149.1| ATP-dependent Clp protease adaptor protein clpS, putative [Ricinus
communis] gi|223531428|gb|EEF33262.1| ATP-dependent Clp
protease adaptor protein clpS, putative [Ricinus
communis]
Length = 120
Score = 48.5 bits (114), Expect(2) = 2e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A E+H + LRGNG +SI P +GGC
Sbjct: 79 QEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 120
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RKTAPP +V L NDNYN +Y++QV
Sbjct: 36 SRKTAPPY-RVILHNDNYNKREYVVQV 61
>gb|ESW25349.1| hypothetical protein PHAVU_003G028500g [Phaseolus vulgaris]
Length = 155
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C ++ E+H + LRGNG +SI P +GGC
Sbjct: 114 QEAHHNGLSVVIICAQSDAEDHCMQLRGNGLLSSIEPADGGC 155
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RKTAPP +V L NDNYN +Y++QV
Sbjct: 71 SRKTAPPY-RVILHNDNYNKREYVVQV 96
>ref|XP_002311446.1| hypothetical protein POPTR_0008s11660g [Populus trichocarpa]
gi|118481362|gb|ABK92624.1| unknown [Populus
trichocarpa] gi|222851266|gb|EEE88813.1| hypothetical
protein POPTR_0008s11660g [Populus trichocarpa]
Length = 158
Score = 49.7 bits (117), Expect(2) = 3e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 117 QEAHYNGLSVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158
Score = 32.0 bits (71), Expect(2) = 3e-07
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDNYN +Y++QV
Sbjct: 75 KKMAPPYRVMLHNDNYNKREYVVQV 99
>gb|EXC06060.1| ATP-dependent Clp protease adapter protein ClpS [Morus notabilis]
Length = 157
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 116 QEAHYNGLSVVIICDQADAEEHCMQLRGNGLLSSIEPASGGC 157
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RKTAPP +V L NDN+N +Y++QV
Sbjct: 73 SRKTAPPY-RVILHNDNFNKREYVVQV 98
>ref|XP_002315955.2| hypothetical protein POPTR_0010s13860g [Populus trichocarpa]
gi|550329760|gb|EEF02126.2| hypothetical protein
POPTR_0010s13860g [Populus trichocarpa]
Length = 160
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 119 QEAHYNGLSVVIICTQADAEEHCMQLRGNGLLSSIEPASGGC 160
Score = 31.2 bits (69), Expect(2) = 4e-07
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDNYN +Y++QV
Sbjct: 77 KKMAPPYRVILHNDNYNKREYVVQV 101
>gb|EOY02119.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein isoform 1 [Theobroma cacao]
Length = 158
Score = 50.8 bits (120), Expect(2) = 4e-07
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 117 QEAHYNGLAVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RK APP +V L NDN+N +Y++QV
Sbjct: 74 SRKIAPPY-RVILHNDNFNKREYVVQV 99
>ref|NP_001235414.1| uncharacterized protein LOC100500511 [Glycine max]
gi|255630508|gb|ACU15612.1| unknown [Glycine max]
Length = 155
Score = 50.1 bits (118), Expect(2) = 4e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A E+H + LRGNG +SI P NGGC
Sbjct: 114 QEAHYNGLSVVIICDQADAEDHCMQLRGNGLLSSIEPANGGC 155
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RK+APP +V L NDN+N +Y++QV
Sbjct: 71 SRKSAPPY-RVILHNDNFNKREYVVQV 96
>ref|XP_004512946.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Cicer arietinum]
Length = 161
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C + E+H + LRGNG +SI P +GGC
Sbjct: 120 QEAHYNGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC 161
Score = 32.3 bits (72), Expect(2) = 6e-07
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDNYN +Y++QV
Sbjct: 78 KKTSPPYRVMLHNDNYNKREYVVQV 102
>gb|AFK41868.1| unknown [Medicago truncatula]
Length = 160
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C + E+H + LRGNG +SI P +GGC
Sbjct: 119 QEAHINGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC 160
Score = 32.3 bits (72), Expect(2) = 6e-07
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDNYN +Y++QV
Sbjct: 77 KKTSPPYRVMLHNDNYNKREYVVQV 101
>ref|XP_006484423.1| PREDICTED: uncharacterized protein LOC102625837 isoform X1 [Citrus
sinensis]
Length = 157
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 116 QEAHCNGLSVVIICSQADAEEHCMQLRGNGLLSSIEPASGGC 157
Score = 30.8 bits (68), Expect(2) = 6e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 70 RKTAPPP*QVRLQNDNYNSCKYIIQV 147
RKT+PP +V L NDN+N +Y++QV
Sbjct: 74 RKTSPPY-RVILHNDNFNKREYVVQV 98
>ref|XP_006484424.1| PREDICTED: uncharacterized protein LOC102625837 isoform X2 [Citrus
sinensis]
Length = 156
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 115 QEAHCNGLSVVIICSQADAEEHCMQLRGNGLLSSIEPASGGC 156
Score = 30.8 bits (68), Expect(2) = 6e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 70 RKTAPPP*QVRLQNDNYNSCKYIIQV 147
RKT+PP +V L NDN+N +Y++QV
Sbjct: 73 RKTSPPY-RVILHNDNFNKREYVVQV 97
>ref|XP_006437722.1| hypothetical protein CICLE_v10032968mg [Citrus clementina]
gi|557539918|gb|ESR50962.1| hypothetical protein
CICLE_v10032968mg [Citrus clementina]
Length = 156
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 115 QEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIEPASGGC 156
Score = 30.8 bits (68), Expect(2) = 6e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 70 RKTAPPP*QVRLQNDNYNSCKYIIQV 147
RKT+PP +V L NDN+N +Y++QV
Sbjct: 73 RKTSPPY-RVILHNDNFNKREYVVQV 97
>gb|EOY02120.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein isoform 2 [Theobroma cacao]
Length = 117
Score = 50.8 bits (120), Expect(2) = 6e-07
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 76 QEAHYNGLAVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 117
Score = 29.6 bits (65), Expect(2) = 6e-07
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 70 RKTAPPP*QVRLQNDNYNSCKYIIQV 147
RK APP +V L NDN+N +Y++QV
Sbjct: 34 RKIAPPY-RVILHNDNFNKREYVVQV 58
>ref|XP_006437721.1| hypothetical protein CICLE_v10032968mg [Citrus clementina]
gi|567890405|ref|XP_006437723.1| hypothetical protein
CICLE_v10032968mg [Citrus clementina]
gi|557539917|gb|ESR50961.1| hypothetical protein
CICLE_v10032968mg [Citrus clementina]
gi|557539919|gb|ESR50963.1| hypothetical protein
CICLE_v10032968mg [Citrus clementina]
Length = 118
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A EEH + LRGNG +SI P +GGC
Sbjct: 77 QEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIEPASGGC 118
Score = 30.8 bits (68), Expect(2) = 6e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 70 RKTAPPP*QVRLQNDNYNSCKYIIQV 147
RKT+PP +V L NDN+N +Y++QV
Sbjct: 35 RKTSPPY-RVILHNDNFNKREYVVQV 59
>ref|XP_006341627.1| PREDICTED: uncharacterized protein LOC102601216 [Solanum tuberosum]
Length = 159
Score = 50.4 bits (119), Expect(2) = 8e-07
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A EEH LRGNG +SI P +GGC
Sbjct: 118 QEAHHNGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 159
Score = 29.6 bits (65), Expect(2) = 8e-07
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 85 PP*QVRLQNDNYNSCKYIIQV 147
PP +V L NDN+N +Y++QV
Sbjct: 80 PPYRVMLHNDNFNKREYVVQV 100
>ref|XP_004235826.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Solanum lycopersicum]
Length = 159
Score = 50.4 bits (119), Expect(2) = 8e-07
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A EEH LRGNG +SI P +GGC
Sbjct: 118 QEAHHNGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 159
Score = 29.6 bits (65), Expect(2) = 8e-07
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 85 PP*QVRLQNDNYNSCKYIIQV 147
PP +V L NDN+N +Y++QV
Sbjct: 80 PPYRVMLHNDNFNKREYVVQV 100
>ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
vinifera] gi|147853628|emb|CAN80233.1| hypothetical
protein VITISV_037190 [Vitis vinifera]
Length = 157
Score = 48.5 bits (114), Expect(2) = 8e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N L+VVI C +A E+H + LRGNG +SI P +GGC
Sbjct: 116 QEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 157
Score = 31.6 bits (70), Expect(2) = 8e-07
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 67 TRKTAPPP*QVRLQNDNYNSCKYIIQV 147
+RK APP +V L NDNYN +Y++QV
Sbjct: 73 SRKIAPPY-RVILHNDNYNKREYVVQV 98
>ref|NP_564937.1| protein ClpS1 [Arabidopsis thaliana]
gi|5734712|gb|AAD49977.1|AC008075_10 ESTs gb|T41781 and
gb|AA586096 come from this gene [Arabidopsis thaliana]
gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
[Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
At1g68660/F24J5_4 [Arabidopsis thaliana]
gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
[Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
unknown [Arabidopsis thaliana]
gi|332196703|gb|AEE34824.1| ribosomal protein L12/
ATP-dependent Clp protease adaptor protein ClpS family
protein [Arabidopsis thaliana]
Length = 159
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A E+H + LRGNG +S+ P GGC
Sbjct: 118 QEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDN+N +Y++QV
Sbjct: 76 KKIAPPYRVILHNDNFNKREYVVQV 100
>ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp.
lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein
ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A E+H + LRGNG +S+ P GGC
Sbjct: 118 QEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDN+N +Y++QV
Sbjct: 76 KKMAPPYRVILHNDNFNKREYVVQV 100
>ref|XP_006391113.1| hypothetical protein EUTSA_v10019264mg [Eutrema salsugineum]
gi|557087547|gb|ESQ28399.1| hypothetical protein
EUTSA_v10019264mg [Eutrema salsugineum]
Length = 158
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 197 QEVHDNSLAVVINCFRALTEEHWLLLRGNGQTNSILPPNGGC 322
QE H N LAVVI C +A E+H + LRGNG +S+ P GGC
Sbjct: 117 QEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 158
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 73 KTAPPP*QVRLQNDNYNSCKYIIQV 147
K PP +V L NDN+N +Y++QV
Sbjct: 75 KKMAPPYRVILHNDNFNKREYVVQV 99