BLASTX nr result

ID: Zingiber24_contig00035325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035325
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citr...   112   4e-23
ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding prote...   112   5e-23
ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding prote...   112   5e-23
ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-li...   110   2e-22
ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein...   110   2e-22
ref|XP_004500218.1| PREDICTED: pre-mRNA-splicing factor cwc22-li...   109   3e-22
gb|AFK47423.1| unknown [Medicago truncatula]                          109   3e-22
gb|AFK40884.1| unknown [Lotus japonicus]                              109   4e-22
gb|ACN26118.1| unknown [Zea mays] gi|413956219|gb|AFW88868.1| hy...   108   9e-22
gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabi...   107   1e-21
ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294...   107   1e-21
gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus...   107   2e-21
ref|XP_004984684.1| PREDICTED: serine/arginine repetitive matrix...   107   2e-21
ref|XP_004984683.1| PREDICTED: serine/arginine repetitive matrix...   107   2e-21
ref|XP_004984682.1| PREDICTED: serine/arginine repetitive matrix...   107   2e-21
ref|XP_002314126.1| transformer serine/arginine-rich ribonucleop...   107   2e-21
ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246...   106   3e-21
ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835...   106   3e-21
emb|CBI16010.3| unnamed protein product [Vitis vinifera]              106   3e-21
emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]   106   3e-21

>ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citrus clementina]
           gi|568870553|ref|XP_006488466.1| PREDICTED:
           uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Citrus sinensis] gi|557526940|gb|ESR38246.1|
           hypothetical protein CICLE_v10028652mg [Citrus
           clementina]
          Length = 381

 Score =  112 bits (281), Expect = 4e-23
 Identities = 51/63 (80%), Positives = 58/63 (92%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV+D HLVVD WT+ESRGFGFVTM++++EA
Sbjct: 39  AENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMATVEEA 98

Query: 9   DRC 1
           DRC
Sbjct: 99  DRC 101


>ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X2 [Glycine max]
           gi|571474306|ref|XP_006586190.1| PREDICTED:
           uncharacterized RNA-binding protein C25G10.01-like
           isoform X3 [Glycine max]
          Length = 143

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV+D HLVVD WT+ESRGFGFVTM +++EA
Sbjct: 43  AENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEA 102

Query: 9   DRC 1
           DRC
Sbjct: 103 DRC 105


>ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Glycine max]
          Length = 362

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV+D HLVVD WT+ESRGFGFVTM +++EA
Sbjct: 43  AENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEA 102

Query: 9   DRC 1
           DRC
Sbjct: 103 DRC 105


>ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Glycine max]
          Length = 364

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV+D HLVVD WT+ESRGFGFVTM +++EA
Sbjct: 45  AENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEA 104

Query: 9   DRC 1
           +RC
Sbjct: 105 ERC 107


>ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
           communis] gi|223540279|gb|EEF41850.1| FUS-interacting
           serine-arginine-rich protein 1, putative [Ricinus
           communis]
          Length = 399

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS RIT+R+LEKHF +EGKV+D HLVVD WT+ESRGFGFVTMS++ EAD
Sbjct: 43  ENPGNNLYVTGLSPRITKRDLEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMSTLVEAD 102

Query: 6   RC 1
           RC
Sbjct: 103 RC 104


>ref|XP_004500218.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Cicer arietinum]
          Length = 359

 Score =  109 bits (273), Expect = 3e-22
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV+D HLVVD WT+ SRGFGFVTM +++EA
Sbjct: 45  AENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRASRGFGFVTMETLEEA 104

Query: 9   DRC 1
           DRC
Sbjct: 105 DRC 107


>gb|AFK47423.1| unknown [Medicago truncatula]
          Length = 340

 Score =  109 bits (273), Expect = 3e-22
 Identities = 50/62 (80%), Positives = 56/62 (90%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS RIT+RELEKHF  +GKVVD HLVVD WT+ESRGFGFVTM +++EAD
Sbjct: 41  ENPGNNLYVTGLSPRITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLEEAD 100

Query: 6   RC 1
           RC
Sbjct: 101 RC 102


>gb|AFK40884.1| unknown [Lotus japonicus]
          Length = 344

 Score =  109 bits (272), Expect = 4e-22
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS RIT+RELEKHF TEGKV+D HLVVD WT+ESRGFGFVTM ++++A+
Sbjct: 44  ENPGNNLYVTGLSPRITKRELEKHFATEGKVIDVHLVVDPWTRESRGFGFVTMDTLEDAN 103

Query: 6   RC 1
           RC
Sbjct: 104 RC 105


>gb|ACN26118.1| unknown [Zea mays] gi|413956219|gb|AFW88868.1| hypothetical protein
           ZEAMMB73_204329 [Zea mays]
          Length = 315

 Score =  108 bits (269), Expect = 9e-22
 Identities = 46/63 (73%), Positives = 59/63 (93%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS+R+T+R+LEKHF TEG+V+D+ +V D WT+ESRGFGFVTM+++K+A
Sbjct: 35  AENPGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASVVYDPWTRESRGFGFVTMAAVKDA 94

Query: 9   DRC 1
           DRC
Sbjct: 95  DRC 97


>gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 492

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           +NPGNNLYVTGLS RIT+RELEKHF TEGKVVD HLVVD  T+ESRGFGFV+MSS++EAD
Sbjct: 143 DNPGNNLYVTGLSPRITKRELEKHFVTEGKVVDVHLVVDPCTRESRGFGFVSMSSVEEAD 202

Query: 6   RC 1
           RC
Sbjct: 203 RC 204


>ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294250 [Fragaria vesca
           subsp. vesca]
          Length = 363

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS RIT RELEKHF +EGKV+D HLVVD WT+ESRGFGFVTM ++  AD
Sbjct: 48  ENPGNNLYVTGLSPRITRRELEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMENVNVAD 107

Query: 6   RC 1
           RC
Sbjct: 108 RC 109


>gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus vulgaris]
          Length = 369

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/63 (79%), Positives = 55/63 (87%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS RIT+RELEKHF  EGKV D HLVVD WT+ESRGFGFVTM +++ A
Sbjct: 47  AENPGNNLYVTGLSPRITKRELEKHFAAEGKVRDVHLVVDPWTRESRGFGFVTMETVEVA 106

Query: 9   DRC 1
           DRC
Sbjct: 107 DRC 109


>ref|XP_004984684.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X3 [Setaria italica]
          Length = 122

 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/63 (73%), Positives = 59/63 (93%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS+R+T+++LEKHF TEG+V+D+ +V D WT+ESRGFGFVTM+++KEA
Sbjct: 35  AENPGNNLYVTGLSARVTDQDLEKHFSTEGEVIDASIVHDPWTRESRGFGFVTMATVKEA 94

Query: 9   DRC 1
           DRC
Sbjct: 95  DRC 97


>ref|XP_004984683.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X2 [Setaria italica]
          Length = 331

 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/63 (73%), Positives = 59/63 (93%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS+R+T+++LEKHF TEG+V+D+ +V D WT+ESRGFGFVTM+++KEA
Sbjct: 35  AENPGNNLYVTGLSARVTDQDLEKHFSTEGEVIDASIVHDPWTRESRGFGFVTMATVKEA 94

Query: 9   DRC 1
           DRC
Sbjct: 95  DRC 97


>ref|XP_004984682.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X1 [Setaria italica]
          Length = 373

 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/63 (73%), Positives = 59/63 (93%)
 Frame = -1

Query: 189 AENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEA 10
           AENPGNNLYVTGLS+R+T+++LEKHF TEG+V+D+ +V D WT+ESRGFGFVTM+++KEA
Sbjct: 77  AENPGNNLYVTGLSARVTDQDLEKHFSTEGEVIDASIVHDPWTRESRGFGFVTMATVKEA 136

Query: 9   DRC 1
           DRC
Sbjct: 137 DRC 139


>ref|XP_002314126.1| transformer serine/arginine-rich ribonucleoprotein [Populus
           trichocarpa] gi|222850534|gb|EEE88081.1| transformer
           serine/arginine-rich ribonucleoprotein [Populus
           trichocarpa]
          Length = 316

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS RIT++ELEKHF  EG V+D HLVVD WT+ESRGFGFVTMS+++EAD
Sbjct: 48  ENPGNNLYVTGLSPRITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEAD 107

Query: 6   RC 1
            C
Sbjct: 108 HC 109


>ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
          Length = 330

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS+R+T+RELEKHF +EG V D HLV D WT+ESRGFGFVTMS+++EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 6   RC 1
           RC
Sbjct: 105 RC 106


>ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835076 [Brachypodium
           distachyon]
          Length = 356

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/62 (72%), Positives = 59/62 (95%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           +NPGNNL+VTGLSSR+T+R+LEKHF TEG+V+D+ +V+D WT+ESRGFGFVTM+++KEAD
Sbjct: 46  DNPGNNLFVTGLSSRLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATLKEAD 105

Query: 6   RC 1
           RC
Sbjct: 106 RC 107


>emb|CBI16010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS+R+T+RELEKHF +EG V D HLV D WT+ESRGFGFVTMS+++EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 6   RC 1
           RC
Sbjct: 105 RC 106


>emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]
          Length = 241

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -1

Query: 186 ENPGNNLYVTGLSSRITERELEKHFETEGKVVDSHLVVDRWTKESRGFGFVTMSSIKEAD 7
           ENPGNNLYVTGLS+R+T+RELEKHF +EG V D HLV D WT+ESRGFGFVTMS+++EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 6   RC 1
           RC
Sbjct: 105 RC 106


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