BLASTX nr result
ID: Zingiber24_contig00035310
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035310
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 85 1e-14
ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 prote... 84 3e-14
ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [S... 83 3e-14
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 82 7e-14
ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 prote... 82 1e-13
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 80 2e-13
ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 prote... 79 5e-13
ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 prote... 79 6e-13
gb|AAG53668.1| RIX4 [Oryza sativa] 78 1e-12
ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group] g... 78 1e-12
gb|AAQ75094.1| Rad21-3 protein [Oryza sativa Japonica Group] 78 1e-12
ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693... 78 1e-12
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 76 5e-12
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote... 75 9e-12
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote... 75 1e-11
ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [A... 73 5e-11
ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 prote... 73 5e-11
ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, par... 71 1e-10
ref|XP_002444147.1| hypothetical protein SORBIDRAFT_07g009560 [S... 71 1e-10
gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops t... 70 2e-10
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = -1
Query: 259 EDFDFLDASIQSSGYKENEAG--TLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEG 86
+D FL+A +S + G +LS RTRAVAQ+L+ QSP + LSLN IL+G
Sbjct: 630 DDLSFLEADNNTSTGSQAHQGVESLSVRTRAVAQYLQRQSPITPSSEGSTDLSLNKILQG 689
Query: 85 KTRRRCAQMFFESLVLKTYGFVDVQQEE 2
KTR+ CA+MFFE+LVLK+YG +DV+QE+
Sbjct: 690 KTRKLCARMFFETLVLKSYGLLDVEQEQ 717
>ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Setaria
italica]
Length = 686
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
+ S G G++S RTRAVA F K+ PS S D + G SLN ILEGK R++ A+MFF
Sbjct: 592 VSSVGTGTTRLGSMSTRTRAVAMFFKDHVPSTSSDGQPGKFSLNKILEGKARKQAARMFF 651
Query: 52 ESLVLKTYGFVDVQQEE 2
E+ VLK+Y ++DVQQEE
Sbjct: 652 ETTVLKSYDYIDVQQEE 668
>ref|XP_002444148.1| hypothetical protein SORBIDRAFT_07g009570 [Sorghum bicolor]
gi|241940498|gb|EES13643.1| hypothetical protein
SORBIDRAFT_07g009570 [Sorghum bicolor]
Length = 687
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
+ S+G + ++S RTRAVA F K+ PS S D++ G SLN ILEGKTR++ A+MFF
Sbjct: 592 VSSAGTRTTGLASMSTRTRAVALFFKDHVPSPSSDEQPGKFSLNKILEGKTRKQAARMFF 651
Query: 52 ESLVLKTYGFVDVQQEE 2
E+ VLK+Y ++DVQQ E
Sbjct: 652 ETTVLKSYDYIDVQQAE 668
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 DASIQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKE-HGVLSLNDILEGKTRRRCA 65
D + + G+LS RTRAVA++LK QSP ++ H LSLN ILEGKTR+ CA
Sbjct: 579 DGNTPTESQGSQGVGSLSVRTRAVAKYLKKQSPITPISEDLHRDLSLNKILEGKTRKICA 638
Query: 64 QMFFESLVLKTYGFVDVQQEE 2
+MFFE+LVLK+YG VDV+Q++
Sbjct: 639 RMFFETLVLKSYGLVDVRQDD 659
>ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Oryza
brachyantha]
Length = 733
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
I ++G G++SARTRAVAQ+ K+ S + D + G SLN ILEG+ R++ A+MFF
Sbjct: 639 ISTAGTGTTGLGSMSARTRAVAQYFKDHMASATSDDQPGKFSLNKILEGRARKQAARMFF 698
Query: 52 ESLVLKTYGFVDVQQEE 2
E+LVLK+Y ++DVQQ+E
Sbjct: 699 ETLVLKSYDYIDVQQDE 715
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -1
Query: 205 EAGTLSARTRAVAQFLKNQSPSQSQDKEHGV-LSLNDILEGKTRRRCAQMFFESLVLKTY 29
+ TLS RTRAVAQ+L+N SP ++ + LSLN ILEGKTR+ A+MFFE+LVLK Y
Sbjct: 675 DVSTLSIRTRAVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNY 734
Query: 28 GFVDVQQEE 2
G VDVQQEE
Sbjct: 735 GLVDVQQEE 743
>ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Brachypodium
distachyon]
Length = 677
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = -1
Query: 226 SSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFFES 47
S+G G++SARTRAVAQ+ K++ S + + + G SLN ILEG+ R++ A+MFFE+
Sbjct: 585 SAGTGATGLGSMSARTRAVAQYFKDKMSSATSNDQPGKFSLNSILEGRRRKQAARMFFET 644
Query: 46 LVLKTYGFVDVQQEE 2
L LK+Y ++DVQQEE
Sbjct: 645 LALKSYDYIDVQQEE 659
>ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Fragaria
vesca subsp. vesca]
Length = 736
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = -1
Query: 259 EDFDFLDASIQSSGYKENEAG--TLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEG 86
ED FL+A ++ + G +LS RTRAVAQ+LK+QSP LSLN ILEG
Sbjct: 637 EDLWFLEADDRTPAGSQGTEGVDSLSVRTRAVAQYLKSQSPEDLSSD----LSLNKILEG 692
Query: 85 KTRRRCAQMFFESLVLKTYGFVDVQQE 5
K R+ CA+MFFE+LVLK+Y +DV+QE
Sbjct: 693 KRRKLCARMFFETLVLKSYDLIDVKQE 719
>gb|AAG53668.1| RIX4 [Oryza sativa]
Length = 528
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
I ++G G++SARTRAVAQ+ K+Q S + D + G LN ILEG+ R++ A+MFF
Sbjct: 410 ISTAGTGTTGLGSMSARTRAVAQYFKDQMASATSDDQPGKFILNRILEGRHRKQAARMFF 469
Query: 52 ESLVLKTYGFVDVQQE 5
E+LVLK+Y ++DV+QE
Sbjct: 470 ETLVLKSYDYIDVEQE 485
>ref|NP_001061406.1| Os08g0266700 [Oryza sativa Japonica Group]
gi|37806398|dbj|BAC99936.1| unknown protein [Oryza
sativa Japonica Group] gi|113623375|dbj|BAF23320.1|
Os08g0266700 [Oryza sativa Japonica Group]
gi|133925837|gb|ABO43671.1| RIX4-4 [Oryza sativa
Japonica Group] gi|215715232|dbj|BAG94983.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640231|gb|EEE68363.1| hypothetical protein
OsJ_26669 [Oryza sativa Japonica Group]
Length = 728
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
I ++G G++SARTRAVAQ+ K+Q S + D + G LN ILEG+ R++ A+MFF
Sbjct: 634 ISTAGTGTTGLGSMSARTRAVAQYFKDQMASATSDDQPGKFILNRILEGRHRKQAARMFF 693
Query: 52 ESLVLKTYGFVDVQQE 5
E+LVLK+Y ++DV+QE
Sbjct: 694 ETLVLKSYDYIDVEQE 709
>gb|AAQ75094.1| Rad21-3 protein [Oryza sativa Japonica Group]
Length = 713
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
I ++G G++SARTRAVAQ+ K+Q S + D + G LN ILEG+ R++ A+MFF
Sbjct: 634 ISTAGTGTTGLGSMSARTRAVAQYFKDQMASATSDDQPGKFILNRILEGRHRKQAARMFF 693
Query: 52 ESLVLKTYGFVDVQQE 5
E+LVLK+Y ++DV+QE
Sbjct: 694 ETLVLKSYDYIDVEQE 709
>ref|NP_001159213.1| hypothetical protein [Zea mays] gi|223942693|gb|ACN25430.1| unknown
[Zea mays] gi|413916835|gb|AFW56767.1| hypothetical
protein ZEAMMB73_164241 [Zea mays]
Length = 627
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = -1
Query: 199 GTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFFESLVLKTYGFV 20
G++SARTRAVA F K+ + S S D+ G SLN ILEGKTR++ A+MFFE+ VLK+Y ++
Sbjct: 544 GSMSARTRAVALFFKDHASSPSDDQP-GKFSLNKILEGKTRKQAARMFFETTVLKSYNYI 602
Query: 19 DVQQEE 2
DVQQE+
Sbjct: 603 DVQQED 608
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -1
Query: 259 EDFDFLDASIQSSGYKENEA-GTLSARTRAVAQFLKNQSPSQS-QDKEHGVLSLNDILEG 86
ED FL+ +G + +LS RTRA+ ++L++ SP +S D + LSLN ILEG
Sbjct: 803 EDLYFLEVDSSPAGSQGTRGVDSLSVRTRALGRYLRSLSPIKSISDNSNQDLSLNGILEG 862
Query: 85 KTRRRCAQMFFESLVLKTYGFVDVQQE 5
K R+ CA+MF+E+LVLK+YG +DVQQ+
Sbjct: 863 KRRKLCARMFYETLVLKSYGLIDVQQD 889
>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
tuberosum]
Length = 675
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -1
Query: 205 EAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFFESLVLKTYG 26
E TLSARTRAVAQ+LK QSP +E G +SLN ILEGK +R CA+MF+E+LVL+ G
Sbjct: 591 EFDTLSARTRAVAQYLKGQSPVTPISEETGDISLNAILEGKKKRICARMFYETLVLENCG 650
Query: 25 FVDVQQEE 2
V Q E
Sbjct: 651 LVRANQHE 658
>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
lycopersicum]
Length = 668
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -1
Query: 205 EAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFFESLVLKTYG 26
E TLSARTRAVAQ+LK QSP +E G +SLN ILEGK +R CA+MF+E+LVL+ G
Sbjct: 582 EFDTLSARTRAVAQYLKGQSPVTLISEETGDISLNAILEGKKKRICARMFYETLVLENCG 641
Query: 25 FVDVQQEE 2
V Q E
Sbjct: 642 LVRANQHE 649
>ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [Amborella trichopoda]
gi|548847646|gb|ERN06808.1| hypothetical protein
AMTR_s00005p00204930 [Amborella trichopoda]
Length = 606
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -1
Query: 259 EDFDFLDASIQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKT 80
ED D + +S + ++S+RTR VAQ+L++ S + + VLSLND LEGKT
Sbjct: 506 EDEDLNSSVAESRSTVDAGFASVSSRTRVVAQYLRSAFQSWKRGPKE-VLSLNDTLEGKT 564
Query: 79 RRRCAQMFFESLVLKTYGFVDVQQE 5
RR CA+MFFE LVLK+ G V+VQQE
Sbjct: 565 RRECAKMFFEILVLKSSGCVNVQQE 589
>ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cicer
arietinum]
Length = 698
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -1
Query: 238 ASIQSSGYKENEAGTLSARTRAVAQFLKNQSP-SQSQDKEHGVLSLNDILEGKTRRRCAQ 62
+S + S TLS RTR VAQFLK+ SP + + SLN ILEGKTR+ A+
Sbjct: 601 SSQRGSQSTSKSISTLSGRTRGVAQFLKDYSPCTPISEVPAEDFSLNKILEGKTRKIAAR 660
Query: 61 MFFESLVLKTYGFVDVQQE 5
MFFE LVLKT GF+DVQQE
Sbjct: 661 MFFEVLVLKTRGFIDVQQE 679
>ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, partial [Citrus
clementina] gi|557541259|gb|ESR52303.1| hypothetical
protein CICLE_v100309242mg, partial [Citrus clementina]
Length = 123
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Frame = -1
Query: 235 SIQSSGYKE-----NEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRR 71
S+++SG + N A + AVAQ+L+ QSP + LSLN IL+GKTR+
Sbjct: 23 SLETSGLSDIPELINSAEADVSTCVAVAQYLQRQSPITPSSEGSTDLSLNKILQGKTRKL 82
Query: 70 CAQMFFESLVLKTYGFVDVQQEE 2
CA+MFFE+LVLK+YG +DV+QE+
Sbjct: 83 CARMFFETLVLKSYGLLDVEQEQ 105
>ref|XP_002444147.1| hypothetical protein SORBIDRAFT_07g009560 [Sorghum bicolor]
gi|241940497|gb|EES13642.1| hypothetical protein
SORBIDRAFT_07g009560 [Sorghum bicolor]
Length = 282
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -1
Query: 232 IQSSGYKENEAGTLSARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMFF 53
I S+G N G++SARTRAVA F +++ PS +++ G SL+ ILE K R++ + MFF
Sbjct: 189 ISSAGTGTNGLGSMSARTRAVALFFRDRVPSTPPEEQPGKFSLSRILERKIRKQASWMFF 248
Query: 52 ESLVLKTYGFVDVQQEE 2
E++VL + G++DVQQ E
Sbjct: 249 ETMVLTSCGYIDVQQGE 265
>gb|EMT29103.1| Sister chromatid cohesion 1 protein 3 [Aegilops tauschii]
Length = 626
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 IQSSGYKENEAGTL-SARTRAVAQFLKNQSPSQSQDKEHGVLSLNDILEGKTRRRCAQMF 56
I S+G G++ S RTRA AQ+ K S + + + G SLN IL+G+T+++ A MF
Sbjct: 531 ISSAGTSTTGLGSIMSTRTRAAAQYFKGMMSSATSEDQPGKFSLNRILDGRTKKQAASMF 590
Query: 55 FESLVLKTYGFVDVQQEE 2
FE+L LK+Y ++DV QEE
Sbjct: 591 FETLALKSYDYIDVHQEE 608