BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035307
         (336 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog ...   100   3e-19
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...    98   1e-18
gb|AFW71835.1| hypothetical protein ZEAMMB73_748424 [Zea mays]         96   4e-18
gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus nota...    96   5e-18
gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isofor...    95   8e-18
ref|XP_004952756.1| PREDICTED: DNA repair protein XRCC3 homolog ...    94   1e-17
ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [S...    94   2e-17
ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ...    93   3e-17
ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [A...    93   4e-17
emb|CBI17834.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...    93   4e-17
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]    93   4e-17
ref|XP_006648750.1| PREDICTED: DNA repair protein XRCC3 homolog ...    92   5e-17
ref|XP_003572626.1| PREDICTED: DNA repair protein XRCC3 homolog ...    92   5e-17
ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog ...    92   9e-17
gb|EMT33552.1| DNA repair XRCC3-like protein [Aegilops tauschii]       91   1e-16
gb|EMS60012.1| DNA repair protein XRCC3-like protein [Triticum u...    91   1e-16
ref|NP_001047150.1| Os02g0562100 [Oryza sativa Japonica Group] g...    91   2e-16
gb|EAY86307.1| hypothetical protein OsI_07680 [Oryza sativa Indi...    91   2e-16
ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Popu...    90   4e-16

>ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog [Fragaria vesca subsp.
           vesca]
          Length = 284

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIV--ENNASSR-TTRRMQVVFAPHLPEAS 159
           L SSGR+VCPALG++W+NCVN+RLFLSR + IV  EN   SR T RR+ VVFAPHLP +S
Sbjct: 210 LYSSGRRVCPALGLAWSNCVNSRLFLSRNEEIVGRENGEMSRHTKRRLDVVFAPHLPPSS 269

Query: 158 CEFVIVRDGVFGVD 117
           CEFVI   GVFGVD
Sbjct: 270 CEFVITEYGVFGVD 283


>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIVENNAS-----SRTTRRMQVVFAPHLPE 165
           L SSGR+VCPALG++WANCVN+RLFLSR +  + + A      S+T RR+ VVFAPHLP 
Sbjct: 225 LYSSGRRVCPALGLAWANCVNSRLFLSRDENGMVDGAESGSFCSQTRRRLHVVFAPHLPY 284

Query: 164 ASCEFVIVRDGVFGVD 117
           +SCEFVI R+GVFG+D
Sbjct: 285 SSCEFVIRREGVFGID 300


>gb|AFW71835.1| hypothetical protein ZEAMMB73_748424 [Zea mays]
          Length = 291

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 49/70 (70%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRR-MQVVFAPHLPEASCEFV 147
           SSGR++ PALGI+WANCVNTRLFL+R+   VE N +S + RR M+V FAPHLPE SCEFV
Sbjct: 222 SSGRRLSPALGIAWANCVNTRLFLTRE---VEGNGTSGSARRWMKVAFAPHLPEQSCEFV 278

Query: 146 IVRDGVFGVD 117
           I RDGVFGV+
Sbjct: 279 IRRDGVFGVE 288


>gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus notabilis]
          Length = 299

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/83 (59%), Positives = 62/83 (74%), Gaps = 11/83 (13%)
 Frame = -2

Query: 332 YLCSSGRQVCPALGISWANCVNTRLFLSRKDMIV-ENNASS----------RTTRRMQVV 186
           YL SS R+VCPALG++WANCVN+RLFLSR + ++ E N S+          +T RR+ V+
Sbjct: 216 YLYSSERRVCPALGLAWANCVNSRLFLSRNEEVIREENGSANAGNGDTLRRQTRRRIHVL 275

Query: 185 FAPHLPEASCEFVIVRDGVFGVD 117
           FAPHLPE+S EFVI R+GVFGVD
Sbjct: 276 FAPHLPESSTEFVIRREGVFGVD 298


>gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|508784570|gb|EOY31826.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784571|gb|EOY31827.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784572|gb|EOY31828.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784573|gb|EOY31829.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
          Length = 299

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 11/86 (12%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIV-ENNAS----------SRTTRRMQVVF 183
           L +SGR+VCPALG++WANCVN+RLFLSR + +  E N             +T R++ VVF
Sbjct: 214 LYTSGRRVCPALGLAWANCVNSRLFLSRHEEVNREENGKLIGESGGFVCKQTRRKLYVVF 273

Query: 182 APHLPEASCEFVIVRDGVFGVDL*RC 105
           APHLPE+SCEFVI R+G+FGV++  C
Sbjct: 274 APHLPESSCEFVITREGLFGVEITAC 299


>ref|XP_004952756.1| PREDICTED: DNA repair protein XRCC3 homolog [Setaria italica]
          Length = 290

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGR+V PALGI+WANCVNTRLFL+R+     + AS    RRM+V FAPHLPE +CEFVI
Sbjct: 222 SSGRRVSPALGIAWANCVNTRLFLTRE----VDGASGIAMRRMKVAFAPHLPERACEFVI 277

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 278 RRDGVFGVE 286


>ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [Sorghum bicolor]
           gi|241933847|gb|EES06992.1| hypothetical protein
           SORBIDRAFT_04g023090 [Sorghum bicolor]
          Length = 292

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGR+V PALGI+WANCVN RLFL+R+  +  + AS    RRM+V FAPHLPE SCEF+I
Sbjct: 222 SSGRRVSPALGIAWANCVNMRLFLTRE--VGGDGASGSARRRMKVAFAPHLPERSCEFMI 279

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 280 RRDGVFGVE 288


>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
           gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
           protein XRCC3 homolog [Cucumis sativus]
          Length = 294

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 10/82 (12%)
 Frame = -2

Query: 332 YLCSSGRQVCPALGISWANCVNTRLFLSRKDMIVEN-----NASS-----RTTRRMQVVF 183
           +LCSS R+VCPALG++WANCVN+RLFLSR + +V       N S      RT R + VVF
Sbjct: 211 FLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVF 270

Query: 182 APHLPEASCEFVIVRDGVFGVD 117
           APHLP++SCE+VI R+GV GV+
Sbjct: 271 APHLPKSSCEYVINREGVVGVE 292


>ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [Amborella trichopoda]
           gi|548848204|gb|ERN07307.1| hypothetical protein
           AMTR_s00019p00219950 [Amborella trichopoda]
          Length = 315

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 50/92 (54%), Positives = 59/92 (64%), Gaps = 22/92 (23%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIVENNA----------------------S 216
           L SSGR+VCPALG+SWANCVN+R+FLSR +  V +N                        
Sbjct: 222 LFSSGRKVCPALGLSWANCVNSRVFLSRDEEKVADNKMWGSNSQALSENGGFEDGYGDFR 281

Query: 215 SRTTRRMQVVFAPHLPEASCEFVIVRDGVFGV 120
           +RT R+MQVVFAPHLP+ SCEF I RDGVFGV
Sbjct: 282 TRTRRKMQVVFAPHLPKFSCEFEIRRDGVFGV 313


>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 11/82 (13%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIV----------ENNASSRTTRR-MQVVF 183
           L SSGR+VC ALG+SWANCVN+RLFLSR + IV            +  SR TRR + V+F
Sbjct: 178 LWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLTRRHLHVIF 237

Query: 182 APHLPEASCEFVIVRDGVFGVD 117
           APHLPE+SCEFVI R+GV GV+
Sbjct: 238 APHLPESSCEFVISREGVLGVE 259


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 11/82 (13%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIV----------ENNASSRTTRR-MQVVF 183
           L SSGR+VC ALG+SWANCVN+RLFLSR + IV            +  SR TRR + V+F
Sbjct: 218 LWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLTRRHLHVIF 277

Query: 182 APHLPEASCEFVIVRDGVFGVD 117
           APHLPE+SCEFVI R+GV GV+
Sbjct: 278 APHLPESSCEFVISREGVLGVE 299


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 11/82 (13%)
 Frame = -2

Query: 329  LCSSGRQVCPALGISWANCVNTRLFLSRKDMIVE-----------NNASSRTTRRMQVVF 183
            L SSGR+VC ALG+SWANCVN+RLFLSR + IV            +  S  T R + V+F
Sbjct: 1995 LWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVXEVTGLGGVGAGDTVSRLTRRHLHVIF 2054

Query: 182  APHLPEASCEFVIVRDGVFGVD 117
            APHLPE+SCEFVI R+GV GV+
Sbjct: 2055 APHLPESSCEFVISREGVLGVE 2076


>ref|XP_006648750.1| PREDICTED: DNA repair protein XRCC3 homolog [Oryza brachyantha]
          Length = 450

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGR+V PALG++WANCVNTRLFL+R      +   S  TRRM+V FAPHLPE +CEFVI
Sbjct: 222 SSGRRVSPALGLAWANCVNTRLFLTR------DADGSVNTRRMKVAFAPHLPERACEFVI 275

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 276 RRDGVFGVE 284


>ref|XP_003572626.1| PREDICTED: DNA repair protein XRCC3 homolog [Brachypodium
           distachyon]
          Length = 288

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGRQV PALG++WANCVNTRLFL+R+   V+ N  S   R M+VVFAPHLPE +CEFVI
Sbjct: 220 SSGRQVSPALGLAWANCVNTRLFLTRE---VDGNGGS-VKRHMKVVFAPHLPERTCEFVI 275

Query: 143 VRDGVFGVD 117
            R GVFGV+
Sbjct: 276 RRTGVFGVE 284


>ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog [Cicer arietinum]
          Length = 296

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = -2

Query: 329 LCSSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEF 150
           L SSGR+VCPALG+SWANCVN+R FLS  D   E        RR+ VVFAPHLP+ S  F
Sbjct: 220 LYSSGRRVCPALGLSWANCVNSRFFLSMDDEYEEGGGRVTKMRRLSVVFAPHLPQCSSRF 279

Query: 149 VIVRDGVFGVDL 114
           VI  +GVFGV++
Sbjct: 280 VITTEGVFGVEM 291


>gb|EMT33552.1| DNA repair XRCC3-like protein [Aegilops tauschii]
          Length = 284

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGRQV PALG++WANCVNTRLFL+R+   V++N  S   R M+V FAPHLP  +CEFVI
Sbjct: 216 SSGRQVSPALGLAWANCVNTRLFLTRE---VDSNGGS-ARRHMKVAFAPHLPVRTCEFVI 271

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 272 RRDGVFGVE 280


>gb|EMS60012.1| DNA repair protein XRCC3-like protein [Triticum urartu]
          Length = 362

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGRQV PALG++WANCVNTRLFL+R+   V++N  S   R M+V FAPHLP  +CEFVI
Sbjct: 234 SSGRQVSPALGLAWANCVNTRLFLTRE---VDSNGGS-ARRHMKVAFAPHLPVRTCEFVI 289

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 290 RRDGVFGVE 298


>ref|NP_001047150.1| Os02g0562100 [Oryza sativa Japonica Group]
           gi|46391018|dbj|BAD16552.1| putative XRCC3 [Oryza sativa
           Japonica Group] gi|113536681|dbj|BAF09064.1|
           Os02g0562100 [Oryza sativa Japonica Group]
           gi|125582531|gb|EAZ23462.1| hypothetical protein
           OsJ_07156 [Oryza sativa Japonica Group]
          Length = 290

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGR+V PALGI+WANCVNTRLFL+R     + +      RRM+V FAPHLPE +CEFVI
Sbjct: 223 SSGRRVSPALGIAWANCVNTRLFLTR-----DADGRGCARRRMKVAFAPHLPERACEFVI 277

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 278 RRDGVFGVE 286


>gb|EAY86307.1| hypothetical protein OsI_07680 [Oryza sativa Indica Group]
          Length = 290

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/69 (65%), Positives = 52/69 (75%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDMIVENNASSRTTRRMQVVFAPHLPEASCEFVI 144
           SSGR+V PALGI+WANCVNTRLFL+R     + +      RRM V FAPHLPE +CEFVI
Sbjct: 223 SSGRRVSPALGIAWANCVNTRLFLTR-----DADGRGCARRRMNVAFAPHLPERACEFVI 277

Query: 143 VRDGVFGVD 117
            RDGVFGV+
Sbjct: 278 RRDGVFGVE 286


>ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Populus trichocarpa]
           gi|222865909|gb|EEF03040.1| hypothetical protein
           POPTR_0018s10090g [Populus trichocarpa]
          Length = 290

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 7/76 (9%)
 Frame = -2

Query: 323 SSGRQVCPALGISWANCVNTRLFLSRKDM---IVENNASS----RTTRRMQVVFAPHLPE 165
           SSGR+VCPALG+SWANCVN+RLFLS+ +    +V    S      T RR+ VVFAPHLP+
Sbjct: 214 SSGRRVCPALGLSWANCVNSRLFLSKDEYESGLVGGGESGFLSRETRRRLHVVFAPHLPD 273

Query: 164 ASCEFVIVRDGVFGVD 117
            SCEFVI R+GV GV+
Sbjct: 274 LSCEFVIRREGVVGVN 289