BLASTX nr result

ID: Zingiber24_contig00035239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035239
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70013.1| myb DNA-binding domain-containing protein [Musa a...    99   6e-19
gb|EXC17386.1| Two-component response regulator [Morus notabilis]      68   1e-09
gb|EMJ02274.1| hypothetical protein PRUPE_ppa006812mg [Prunus pe...    61   1e-07
ref|XP_004981657.1| PREDICTED: probable transcription factor GLK...    59   5e-07
ref|XP_004981656.1| PREDICTED: probable transcription factor GLK...    59   5e-07
ref|XP_004290315.1| PREDICTED: uncharacterized protein LOC101303...    59   9e-07
emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]    59   9e-07
ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267...    58   1e-06
gb|EOX98182.1| Homeodomain-like superfamily protein, putative is...    57   3e-06
ref|NP_001149103.1| DNA binding protein [Zea mays] gi|195624748|...    55   7e-06

>gb|ABF70013.1| myb DNA-binding domain-containing protein [Musa acuminata]
          Length = 375

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 53/96 (55%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
 Frame = -2

Query: 280 VGLDLKLFAMRSAGGFLEEAASAV---DGGVAKXXXXXXXXXXXRKKIEAFKRELPLCML 110
           +GL+L+L A R+ GGF+++ A+ V   D GVAK           R+KI+AFKRELPLCML
Sbjct: 4   IGLELRLCASRTVGGFVKQVAAVVESTDRGVAKLEESVRSLEEERRKIDAFKRELPLCML 63

Query: 109 LLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           LLT+VIE L KELERC G++L ++F+EFI IR  CE
Sbjct: 64  LLTDVIEGLKKELERCRGQKLANAFEEFIPIRRKCE 99


>gb|EXC17386.1| Two-component response regulator [Morus notabilis]
          Length = 390

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLKL-FAMRSAGGFLEEAASAVDGG--VAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LD+   F  R+ G FL E ++  +     +K            +KI+AFKR
Sbjct: 1   MGSLPPELSLDITATFVPRTIGDFLREVSAIGNASERASKLDDFGKRLEDEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           ELPLCMLLL + IE L KE  +C  +  +   +EFI ++ DCE
Sbjct: 61  ELPLCMLLLNDAIEALKKESLQCATQNAQPVLEEFIPLKKDCE 103


>gb|EMJ02274.1| hypothetical protein PRUPE_ppa006812mg [Prunus persica]
          Length = 394

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLK-LFAMRSAGGFLEEAA--SAVDGGVAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LD +  F  ++   FL+E +   +V   ++K            +KI+AFKR
Sbjct: 1   MGSVPPELSLDFRPTFVPKTISDFLKEVSMIGSVSERLSKLDDFVKRLEEEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           ELPLCM LL + I  L ++  +C    ++   +EFI ++ DCE
Sbjct: 61  ELPLCMFLLNDAILALKEDAVQCAAPNVQPVLEEFIPLKKDCE 103


>ref|XP_004981657.1| PREDICTED: probable transcription factor GLK1-like isoform X2
           [Setaria italica]
          Length = 349

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/84 (47%), Positives = 48/84 (57%)
 Frame = -2

Query: 283 EVGLDLKLFAMRSAGGFLEEAASAVDGGVAKXXXXXXXXXXXRKKIEAFKRELPLCMLLL 104
           ++GLDLKLFA RSAGG    AA+A  G  A            R+KIE F+RELPLC+ LL
Sbjct: 13  DLGLDLKLFAARSAGGM---AAAAAKGAPAGIEACIRSLEEERRKIEVFRRELPLCVRLL 69

Query: 103 TEVIELLGKELERCPGERLRHSFK 32
            +VIE L  E  +  GE L    K
Sbjct: 70  ADVIEELKDEAAK-RGEDLELEMK 92


>ref|XP_004981656.1| PREDICTED: probable transcription factor GLK1-like isoform X1
           [Setaria italica]
          Length = 380

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/84 (47%), Positives = 48/84 (57%)
 Frame = -2

Query: 283 EVGLDLKLFAMRSAGGFLEEAASAVDGGVAKXXXXXXXXXXXRKKIEAFKRELPLCMLLL 104
           ++GLDLKLFA RSAGG    AA+A  G  A            R+KIE F+RELPLC+ LL
Sbjct: 13  DLGLDLKLFAARSAGGM---AAAAAKGAPAGIEACIRSLEEERRKIEVFRRELPLCVRLL 69

Query: 103 TEVIELLGKELERCPGERLRHSFK 32
            +VIE L  E  +  GE L    K
Sbjct: 70  ADVIEELKDEAAK-RGEDLELEMK 92


>ref|XP_004290315.1| PREDICTED: uncharacterized protein LOC101303079 [Fragaria vesca
           subsp. vesca]
          Length = 419

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLK-LFAMRSAGGFLEEAA--SAVDGGVAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LD +  F  ++   FL+E +    V   ++K            +KI+AFKR
Sbjct: 1   MGSVPPELSLDFRPSFVPKTITDFLKEVSLIGNVTERLSKLDNFVKRLEEEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           ELPLCM LL + I+ L ++  +C    ++   +EFI ++ DC+
Sbjct: 61  ELPLCMFLLNDAIQALKEDAMQCAKPNVQPVLEEFIPLKKDCD 103


>emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]
          Length = 401

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLK-LFAMRSAGGFLEEAASAVDGG--VAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LDL+  +  ++   FL   ++  D    V K            +KI+AFKR
Sbjct: 1   MGSIPPELSLDLRPSYVPKTINDFLSGISTIGDVSERVTKLDEFLKRLEEEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           ELPLCM+LL++ I  L +EL R     ++   +EFI ++ DC+
Sbjct: 61  ELPLCMILLSDAILALKEELLRSKASNVQPVLEEFIPLKKDCD 103


>ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267475 [Vitis vinifera]
           gi|297741334|emb|CBI32465.3| unnamed protein product
           [Vitis vinifera]
          Length = 401

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLKLFAM-RSAGGFLEEAASAVDGG--VAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LDL+   M ++   FL   ++  D    V K            +KI+AFKR
Sbjct: 1   MGSIPPELSLDLRPSYMPKTINDFLSGISTIGDVSERVTKLDEFLKRLEEEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSDCE 2
           ELPLCM+LL++ I  L +EL R     ++   +EFI ++ DC+
Sbjct: 61  ELPLCMILLSDAILALKEELLRSKASNVQPVLEEFIPLKKDCD 103


>gb|EOX98182.1| Homeodomain-like superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 410

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -2

Query: 301 MGSAATEVGLDLK-LFAMRSAGGFLEEAASA--VDGGVAKXXXXXXXXXXXRKKIEAFKR 131
           MGS   E+ LD +  F  ++   FL+E +    V   V+K            +KI+AFKR
Sbjct: 1   MGSVPPELSLDFRPTFVPKTISNFLKEVSMVGNVSDKVSKVDAFVKGLEEEMRKIDAFKR 60

Query: 130 ELPLCMLLLTEVIELLGKELERCPGERLRHSFKEFISIRSD 8
           ELPLCMLLL + I  L +E  +C    +    +EFI ++++
Sbjct: 61  ELPLCMLLLNDAIVALKEESMQCVTRNVEPVLEEFIPLKNN 101


>ref|NP_001149103.1| DNA binding protein [Zea mays] gi|195624748|gb|ACG34204.1| DNA
           binding protein [Zea mays] gi|414873010|tpg|DAA51567.1|
           TPA: putative MYB DNA-binding domain superfamily protein
           [Zea mays]
          Length = 338

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/77 (44%), Positives = 45/77 (58%)
 Frame = -2

Query: 283 EVGLDLKLFAMRSAGGFLEEAASAVDGGVAKXXXXXXXXXXXRKKIEAFKRELPLCMLLL 104
           ++GLDL LFA RSAGG     A+A  G  A+           R+KIE F+RELPLC+ LL
Sbjct: 13  DLGLDLGLFAARSAGGM----AAAAKGAPAEIESCIRSLEEERRKIEVFRRELPLCVRLL 68

Query: 103 TEVIELLGKELERCPGE 53
            +VI+ L  E  +  G+
Sbjct: 69  ADVIDELKDEAAKRGGD 85


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