BLASTX nr result
ID: Zingiber24_contig00035226
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035226
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006283026.1| hypothetical protein CARUB_v10004018mg [Caps... 64 2e-08
ref|XP_006413339.1| hypothetical protein EUTSA_v10024258mg [Eutr... 63 5e-08
gb|ACY64665.1| SRS2 [Arabidopsis thaliana] 63 5e-08
ref|NP_194242.6| helicase SRS2-like protein [Arabidopsis thalian... 63 5e-08
gb|EMJ20101.1| hypothetical protein PRUPE_ppa000520mg [Prunus pe... 61 1e-07
gb|EOY22733.1| P-loop containing nucleoside triphosphate hydrola... 61 2e-07
ref|XP_004309015.1| PREDICTED: ATP-dependent DNA helicase PcrA-l... 61 2e-07
ref|XP_004235432.1| PREDICTED: ATP-dependent DNA helicase PcrA-l... 61 2e-07
ref|XP_006358199.1| PREDICTED: ATP-dependent DNA helicase srs2-l... 60 4e-07
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R... 60 4e-07
gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare] 59 5e-07
ref|XP_006658570.1| PREDICTED: ATP-dependent DNA helicase srs2-l... 58 1e-06
ref|XP_006838530.1| hypothetical protein AMTR_s00002p00193850 [A... 58 1e-06
ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-l... 58 1e-06
gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japo... 58 1e-06
ref|XP_006376958.1| hypothetical protein POPTR_0012s11560g [Popu... 58 2e-06
ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 58 2e-06
ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-l... 58 2e-06
ref|XP_002332333.1| predicted protein [Populus trichocarpa] 58 2e-06
>ref|XP_006283026.1| hypothetical protein CARUB_v10004018mg [Capsella rubella]
gi|482551731|gb|EOA15924.1| hypothetical protein
CARUB_v10004018mg [Capsella rubella]
Length = 1152
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +3
Query: 3 KATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
+AT KQIA+LHSLGCT++P+SRLHASRLIEQYKSL
Sbjct: 1118 EATSKQIAFLHSLGCTVTPTSRLHASRLIEQYKSL 1152
>ref|XP_006413339.1| hypothetical protein EUTSA_v10024258mg [Eutrema salsugineum]
gi|557114509|gb|ESQ54792.1| hypothetical protein
EUTSA_v10024258mg [Eutrema salsugineum]
Length = 1144
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +3
Query: 3 KATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
+AT KQIA+LHSLGCT+ P+SRLHASRLIEQYKSL
Sbjct: 1110 EATSKQIAFLHSLGCTVVPTSRLHASRLIEQYKSL 1144
>gb|ACY64665.1| SRS2 [Arabidopsis thaliana]
Length = 1147
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +3
Query: 3 KATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
+AT KQIA+LHSLGCT+ P+SRLHASRLIEQYKSL
Sbjct: 1113 EATSKQIAFLHSLGCTVVPTSRLHASRLIEQYKSL 1147
>ref|NP_194242.6| helicase SRS2-like protein [Arabidopsis thaliana]
gi|332659614|gb|AEE85014.1| helicase SRS2-like protein
[Arabidopsis thaliana]
Length = 1149
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +3
Query: 3 KATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
+AT KQIA+LHSLGCT+ P+SRLHASRLIEQYKSL
Sbjct: 1115 EATSKQIAFLHSLGCTVVPTSRLHASRLIEQYKSL 1149
>gb|EMJ20101.1| hypothetical protein PRUPE_ppa000520mg [Prunus persica]
Length = 1116
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/33 (81%), Positives = 32/33 (96%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL +LGCT++P+SRLHASRLIEQYKSL
Sbjct: 1084 TPKQISYLQNLGCTVAPTSRLHASRLIEQYKSL 1116
>gb|EOY22733.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508775478|gb|EOY22734.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 1142
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +3
Query: 6 ATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
AT KQIAYL SLGCT+ P+SRLHASRLIEQYKSL
Sbjct: 1109 ATSKQIAYLQSLGCTVIPTSRLHASRLIEQYKSL 1142
>ref|XP_004309015.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Fragaria vesca
subsp. vesca]
Length = 1091
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL SLGCT +P+SRLHASRLIEQYKSL
Sbjct: 1059 TPKQISYLQSLGCTAAPTSRLHASRLIEQYKSL 1091
>ref|XP_004235432.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Solanum
lycopersicum]
Length = 1196
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQIAYL SLGCT PSSRLHASRLIE+YKSL
Sbjct: 1164 TPKQIAYLQSLGCTTVPSSRLHASRLIEEYKSL 1196
>ref|XP_006358199.1| PREDICTED: ATP-dependent DNA helicase srs2-like [Solanum tuberosum]
Length = 1212
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQIAYL SLGCT P+SRLHASRLIE+YKSL
Sbjct: 1180 TPKQIAYLQSLGCTTVPTSRLHASRLIEEYKSL 1212
>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
pcrA, putative [Ricinus communis]
Length = 1089
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI YL +LGCT+ P+SRLHASRLIEQYKSL
Sbjct: 1057 TPKQIGYLQNLGCTVVPTSRLHASRLIEQYKSL 1089
>gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare]
Length = 1185
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL SLGCTI+P+SRLHAS LIE+YKSL
Sbjct: 1153 TPKQISYLRSLGCTITPTSRLHASNLIEKYKSL 1185
>ref|XP_006658570.1| PREDICTED: ATP-dependent DNA helicase srs2-like [Oryza brachyantha]
Length = 1175
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL +LGCTI+P+SRLHAS LIE+YKSL
Sbjct: 1143 TPKQISYLRNLGCTITPTSRLHASHLIEKYKSL 1175
>ref|XP_006838530.1| hypothetical protein AMTR_s00002p00193850 [Amborella trichopoda]
gi|548841036|gb|ERN01099.1| hypothetical protein
AMTR_s00002p00193850 [Amborella trichopoda]
Length = 1193
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 6 ATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
A+ KQIAYL LGCTI P+SRLHASRLIEQYKSL
Sbjct: 1160 ASTKQIAYLQKLGCTILPTSRLHASRLIEQYKSL 1193
>ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group]
gi|34393626|dbj|BAC83302.1| putative ATP-dependent DNA
helicase [Oryza sativa Japonica Group]
gi|50508450|dbj|BAD30552.1| putative ATP-dependent DNA
helicase [Oryza sativa Japonica Group]
gi|113611219|dbj|BAF21597.1| Os07g0492100 [Oryza sativa
Japonica Group] gi|218199642|gb|EEC82069.1| hypothetical
protein OsI_26061 [Oryza sativa Indica Group]
Length = 1165
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL +LGCTI+P+SRLHAS LIE+YKSL
Sbjct: 1133 TPKQISYLRNLGCTITPTSRLHASHLIEKYKSL 1165
>ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Brachypodium
distachyon]
Length = 1192
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL +LGCTI+P+SRLHAS LIE+YKSL
Sbjct: 1160 TPKQISYLRNLGCTITPTSRLHASHLIEKYKSL 1192
>gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japonica Group]
Length = 1186
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
TPKQI+YL +LGCTI+P+SRLHAS LIE+YKSL
Sbjct: 1154 TPKQISYLRNLGCTITPTSRLHASHLIEKYKSL 1186
>ref|XP_006376958.1| hypothetical protein POPTR_0012s11560g [Populus trichocarpa]
gi|550326893|gb|ERP54755.1| hypothetical protein
POPTR_0012s11560g [Populus trichocarpa]
Length = 1031
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
T KQI YL +LGCT++P+SRLHASRLIEQYKSL
Sbjct: 999 TSKQIGYLQNLGCTVTPTSRLHASRLIEQYKSL 1031
>ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase PcrA-like
[Cucumis sativus]
Length = 1129
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 6 ATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
AT KQI+YL +LGCTI+P+SRLHAS LIEQYKSL
Sbjct: 1096 ATSKQISYLRNLGCTITPTSRLHASSLIEQYKSL 1129
>ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Cucumis sativus]
Length = 1105
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 6 ATPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
AT KQI+YL +LGCTI+P+SRLHAS LIEQYKSL
Sbjct: 1072 ATSKQISYLRNLGCTITPTSRLHASSLIEQYKSL 1105
>ref|XP_002332333.1| predicted protein [Populus trichocarpa]
Length = 1056
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 9 TPKQIAYLHSLGCTISPSSRLHASRLIEQYKSL 107
T KQI YL +LGCT++P+SRLHASRLIEQYKSL
Sbjct: 1024 TSKQIGYLQNLGCTVTPTSRLHASRLIEQYKSL 1056