BLASTX nr result
ID: Zingiber24_contig00035194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00035194
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came... 66 4e-09
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus... 61 2e-07
gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, put... 58 1e-06
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
gb|EMJ21398.1| hypothetical protein PRUPE_ppa003068mg [Prunus pe... 55 1e-05
>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
Length = 771
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 55 GRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALLVEMAKMG 222
GR+ A + ML PDS SPP+ T +I +GL + + +EE + L+ + + G
Sbjct: 210 GRVDDAFQVFDEMLKPDSESPPNEITVNIAMAGLLWRDRTGRSVSDEEIIGLVSKFGECG 269
Query: 223 LFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
+FP + TQ ITKLCR G + AWD H V GG
Sbjct: 270 VFP-SVVRLTQLITKLCRTGKSDRAWDVIHNVMKLGG 305
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Frame = +1
Query: 55 GRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQPLN----EESLALLVEMAKMG 222
GR+ AL +L ML P + PP++ T IVFS L+K+ + EE + L+ + A+
Sbjct: 206 GRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHE 265
Query: 223 LFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
+FP+ +I TQ I++LCR G T AWD H + GG
Sbjct: 266 VFPN-SIWLTQLISRLCRSGRTDRAWDVLHGLMKLGG 301
>ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like isoform X2 [Cicer arietinum]
Length = 643
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +1
Query: 34 LLGSASPGRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALL 201
L+G GR + AL IL ML +S PPD T +VF L K+ +P +EE + L+
Sbjct: 64 LMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGEVVFGELVKRERPGKGLADEEIMGLV 123
Query: 202 VEMAKMGLFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
++ + G+FP D TQ I+KLC AW+ H V GG
Sbjct: 124 TKLGEHGVFP-DTFKLTQLISKLCGKRKNCVAWELLHGVMKLGG 166
>ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like isoform X1 [Cicer arietinum]
Length = 776
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +1
Query: 34 LLGSASPGRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALL 201
L+G GR + AL IL ML +S PPD T +VF L K+ +P +EE + L+
Sbjct: 197 LMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGEVVFGELVKRERPGKGLADEEIMGLV 256
Query: 202 VEMAKMGLFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
++ + G+FP D TQ I+KLC AW+ H V GG
Sbjct: 257 TKLGEHGVFP-DTFKLTQLISKLCGKRKNCVAWELLHGVMKLGG 299
>gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus vulgaris]
Length = 760
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 34 LLGSASPGRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALL 201
L G G + AL +L ML DS PP+ T +VF L +Q + +EE + L+
Sbjct: 182 LKGLFRSGGIDGALHVLDEMLERDSDFPPNNFTGEVVFRVLGEQERRGRSFADEEIMGLV 241
Query: 202 VEMAKMGLFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
++ + G+FP D TQ ITKLCR AW+ H V GG
Sbjct: 242 TKLCEHGVFP-DTFKLTQMITKLCRHRKNGVAWEVLHVVMRLGG 284
>gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 764
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 43 SASPGRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALLVEM 210
S GR+ AL++L ML P S PP+ T IVF GL K+ + EE + L+++
Sbjct: 200 SLRDGRVDYALNVLDEMLQPLSEVPPNDVTGDIVFYGLVKRERKGRKLSEEEIIKLVLKF 259
Query: 211 AKMGLFPHDAILFTQFITKLCRCGATSGAWD 303
+ +FP I TQ IT+LCR G + AW+
Sbjct: 260 GEHSVFPR-TIWLTQLITRLCRSGKINQAWN 289
>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +1
Query: 55 GRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAK----QSQPLNEESLALLVEMAKMG 222
GR+ A+++L ML P+S P+ T IVF+ L K + + +E L+ + K
Sbjct: 53 GRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHN 112
Query: 223 LFPHDAILFTQFITKLCRCGATSGAWD 303
+FP D I TQ I+KLCR G T+ AW+
Sbjct: 113 IFP-DTIALTQLISKLCRSGNTNLAWN 138
>gb|EMJ21398.1| hypothetical protein PRUPE_ppa003068mg [Prunus persica]
Length = 607
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +1
Query: 55 GRLSAALSILRGMLPPDSTSPPDAATRSIVFSGLAKQSQP----LNEESLALLVEMAKMG 222
G + AL +L M P + D T IV S L K+ P E+ + L+++ + G
Sbjct: 58 GCVDDALKVLDEMFAPKAEGRVDQVTGDIVLSYLLKREWPGRSFSEEDIVGLVLKFGERG 117
Query: 223 LFPHDAILFTQFITKLCRCGATSGAWDFFHAVKDAGG 333
+FP D++ T+ IT LCR T+ AWD H V GG
Sbjct: 118 VFP-DSVKLTKLITALCRNRKTNKAWDVLHDVMKLGG 153