BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00035128
         (504 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   142   4e-32
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766...   134   1e-29
ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III s...   131   1e-28
gb|EMT00869.1| DNA-directed RNA polymerase III subunit RPC5 [Aeg...   130   2e-28
gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japo...   129   5e-28
gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indi...   129   5e-28
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   127   2e-27
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   127   2e-27
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   127   2e-27
dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgar...   127   2e-27
dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]    126   3e-27
ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III s...   124   2e-26
gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]        123   2e-26
gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]        123   2e-26
gb|EMS67664.1| DNA-directed RNA polymerase III subunit RPC5 [Tri...   123   3e-26
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       119   4e-25
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   118   7e-25
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   116   3e-24
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   116   3e-24

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score =  142 bits (359), Expect = 4e-32
 Identities = 84/167 (50%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYP-GTSTDDKRTQAFSLRHLLSL 327
           YH  +S F+ RY QKM+AED+  I F++ P +Y+NSL P G S DD R++  S R LLS+
Sbjct: 264 YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 323

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH--- 156
           PLE+R K    E   V+ F+AL   APD+S EDVL VL  +A LVQGLWV KSSLL    
Sbjct: 324 PLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGG 383

Query: 155 EGEAALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVER 15
           +G A L RDY+L LFS  P+I   ++ +  S    LK  L  LAVER
Sbjct: 384 QGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVER 430


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  142 bits (359), Expect = 4e-32
 Identities = 84/167 (50%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYP-GTSTDDKRTQAFSLRHLLSL 327
           YH  +S F+ RY QKM+AED+  I F++ P +Y+NSL P G S DD R++  S R LLS+
Sbjct: 280 YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 339

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH--- 156
           PLE+R K    E   V+ F+AL   APD+S EDVL VL  +A LVQGLWV KSSLL    
Sbjct: 340 PLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGG 399

Query: 155 EGEAALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVER 15
           +G A L RDY+L LFS  P+I   ++ +  S    LK  L  LAVER
Sbjct: 400 QGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVER 446


>ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
          Length = 449

 Score =  134 bits (337), Expect = 1e-29
 Identities = 78/169 (46%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 327
           Y P  S+ + +YH KMI+ +   I F ++ SDY+ SL PG ST  +   +  ++R +L L
Sbjct: 56  YQPTGSNISTKYHDKMISNEGGPIDFTMRNSDYVMSLCPGASTSSRHINKCQAIREMLLL 115

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV +VN F+AL  LAP  S+E++LKVLP YA LV+GLWV KSSLL +  
Sbjct: 116 PLEERLKKWFTEVSEVNQFDALKHLAPTYSEEEILKVLPEYAYLVRGLWVCKSSLLFDDG 175

Query: 146 AALYRDYLLYLFSMNPIIQTDRL-RMLTSKCTGLKSILIPLAVERRILK 3
            A  RD +L  F+    I +D L   +       K IL PL   R ILK
Sbjct: 176 YASKRDRVLLEFTKMESIPSDTLDAWIRLDDPKRKRILFPLCKRRGILK 224


>ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza
           brachyantha]
          Length = 682

 Score =  131 bits (329), Expect = 1e-28
 Identities = 75/168 (44%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRT-QAFSLRHLLSL 327
           Y P  S+   +YH +M++ +   I F +  SDY+ SL PG ST  K   ++ ++R +L L
Sbjct: 289 YQPAGSNIASKYHAEMVSNEGGPIDFTMNTSDYLMSLCPGGSTGSKGVNRSHAIREMLKL 348

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QVN F+AL+ LA   S++D+LKVLP YADLV GLWV KSSLL +  
Sbjct: 349 PLEERLKKWFTEVSQVNQFDALMHLAQTYSEDDLLKVLPVYADLVHGLWVCKSSLLFDDG 408

Query: 146 AALYRDYLLYLFSMN---PIIQTDRLRMLTSKCTGLKSILIPLAVERR 12
            A  RD +L  F+     P+   DRL  +  +    + IL+P   +RR
Sbjct: 409 YACKRDRILLEFTKKDSIPLKDVDRLIRVDDE---RRKILLPPLCKRR 453


>gb|EMT00869.1| DNA-directed RNA polymerase III subunit RPC5 [Aegilops tauschii]
          Length = 576

 Score =  130 bits (326), Expect = 2e-28
 Identities = 75/147 (51%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQI-PFMIKPSDYINSLYPGTSTDDKRTQAFS-LRHLLS 330
           Y P  S    RY+ +M+A +   I  F +   DY  SL PG  T  KRT     LR +LS
Sbjct: 189 YEPAGSDVASRYYAEMMANEGRPIMDFTMSTQDYAMSLCPGGPTGSKRTNRCEVLREMLS 248

Query: 329 LPLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEG 150
           LPLE RLKKWF+EV QVN F+AL+ LAPD S+ED+LK+LP YADLV+GLWV KSSLL++ 
Sbjct: 249 LPLEVRLKKWFTEVSQVNRFDALMHLAPDCSEEDLLKILPVYADLVRGLWVCKSSLLYDD 308

Query: 149 EAALYRDYLLYLFSMN---PIIQTDRL 78
             A  RD +L  F+     P+   DRL
Sbjct: 309 GHASKRDRILLGFTKGESIPVKYVDRL 335


>gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japonica Group]
          Length = 673

 Score =  129 bits (323), Expect = 5e-28
 Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSL 327
           Y    S+   +YH +M+++D   I F +  SDY+ SL PG ST+ + + ++ ++R +L L
Sbjct: 282 YQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKL 341

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QVN F+AL+ LAP  S++DVLKVLP YADLV+GLWV KSSLL +  
Sbjct: 342 PLEERLKKWFTEVSQVNRFDALMHLAPLYSEDDVLKVLPVYADLVRGLWVCKSSLLFDDG 401

Query: 146 AALYRDYLLYLF 111
            A  RD +L  F
Sbjct: 402 YAWKRDRILLEF 413


>gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indica Group]
          Length = 673

 Score =  129 bits (323), Expect = 5e-28
 Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSL 327
           Y    S+   +YH +M+++D   I F +  SDY+ SL PG ST+ + + ++ ++R +L L
Sbjct: 282 YQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKL 341

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QVN F+AL+ LAP  S++DVLKVLP YADLV+GLWV KSSLL +  
Sbjct: 342 PLEERLKKWFTEVSQVNRFDALMHLAPLYSEDDVLKVLPVYADLVRGLWVCKSSLLFDDG 401

Query: 146 AALYRDYLLYLF 111
            A  RD +L  F
Sbjct: 402 YAWKRDRILLEF 413


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
           [Theobroma cacao]
          Length = 736

 Score =  127 bits (318), Expect = 2e-27
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 3/170 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 356

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEG 150
           LE+RLKK  SE    + F+AL   APD+S ED+ +VL  +A LVQGLWV KSSLL   + 
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP 416

Query: 149 EAALYRDYLLYLFSMNPIIQTDRLRMLT-SKCTGLKSILIPLAVERRILK 3
             +L RDY+L LFS NPII   ++  L+ S+   +K  L  LA+ER   K
Sbjct: 417 YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFK 466


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
           [Theobroma cacao]
          Length = 588

 Score =  127 bits (318), Expect = 2e-27
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 3/170 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 201 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 259

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEG 150
           LE+RLKK  SE    + F+AL   APD+S ED+ +VL  +A LVQGLWV KSSLL   + 
Sbjct: 260 LEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP 319

Query: 149 EAALYRDYLLYLFSMNPIIQTDRLRMLT-SKCTGLKSILIPLAVERRILK 3
             +L RDY+L LFS NPII   ++  L+ S+   +K  L  LA+ER   K
Sbjct: 320 YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFK 369


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  127 bits (318), Expect = 2e-27
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 3/170 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 356

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEG 150
           LE+RLKK  SE    + F+AL   APD+S ED+ +VL  +A LVQGLWV KSSLL   + 
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP 416

Query: 149 EAALYRDYLLYLFSMNPIIQTDRLRMLT-SKCTGLKSILIPLAVERRILK 3
             +L RDY+L LFS NPII   ++  L+ S+   +K  L  LA+ER   K
Sbjct: 417 YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFK 466


>dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526307|dbj|BAJ97170.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 676

 Score =  127 bits (318), Expect = 2e-27
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 327
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   +  ++R +LSL
Sbjct: 282 YEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAASLCPGGPTGSKNINRCQAIREMLSL 341

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QV+ F AL+ LAPD S+EDVL++LP YADLV+GLWV +SSLL++  
Sbjct: 342 PLEERLKKWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVCRSSLLYDDG 401

Query: 146 AALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
            A  RD ++  F+    I    +  L         IL PL   R  L+
Sbjct: 402 LASKRDQIMLEFTKMESIPVKYVERLIRDERTRNMILNPLGKRREKLQ 449


>dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 677

 Score =  126 bits (317), Expect = 3e-27
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 327
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   +  ++R +LSL
Sbjct: 283 YEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAVSLCPGGPTGSKNINRCQAIREMLSL 342

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QV+ F AL+ LAPD S+EDVL++LP YADLV+GLWV +SSLL++  
Sbjct: 343 PLEERLKKWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVCRSSLLYDDG 402

Query: 146 AALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
            A  RD ++  F+    I    +  L         IL PL   R  L+
Sbjct: 403 LASKRDQIMLEFTKMESIPVKYVERLIRDERTRNMILNPLGKRREKLQ 450


>ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Brachypodium distachyon]
          Length = 663

 Score =  124 bits (310), Expect = 2e-26
 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 327
           Y P  S    +Y  +M++ +   I F +  SDY  SL PG  T  K   +  ++R +L L
Sbjct: 272 YEPAGSDAASKYLDEMVSNEGSPIGFNMSTSDYWMSLCPGAPTGRKNINKCQAIREMLVL 331

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE RLKKWF+EV QV+ F+AL+ LAP  S+ED+LK+LP YADLV+GLWV KSSLL++ E
Sbjct: 332 PLEDRLKKWFTEVSQVSRFDALMHLAPTYSEEDILKILPMYADLVRGLWVCKSSLLYDDE 391

Query: 146 AALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
               RD +++ F+    +    +  L         IL PL  +R  L+
Sbjct: 392 LGCKRDKIVFEFTKKESVPMKYIDRLIRDDRTRHMILNPLCKKREKLE 439


>gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 677

 Score =  123 bits (309), Expect = 2e-26
 Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAF-SLRHLLSL 327
           Y P  S+   +YH KMIA +   I F +  S Y+ SL PG ST  KR   F ++R +L L
Sbjct: 282 YQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKFQAIREMLLL 341

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV  VN F+AL DLAP  S+ ++LK+LP  A LV+GLWV KSSLL +G 
Sbjct: 342 PLEERLKKWFTEVSGVNRFDALKDLAPTCSEVEILKMLPECAYLVRGLWVCKSSLLFDGV 401

Query: 146 AALYRDYLLYLFSMNPIIQTDRLR---MLTSKCTGLKSILIPLAVERRILK 3
            +   D +L  F+    + ++ L     L         IL PL   R+ILK
Sbjct: 402 YSGPMDRILLEFTKRDPVPSNILEPFINLIGNRAMRDWILSPLCKRRQILK 452


>gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 618

 Score =  123 bits (309), Expect = 2e-26
 Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAF-SLRHLLSL 327
           Y P  S+   +YH KMIA +   I F +  S Y+ SL PG ST  KR   F ++R +L L
Sbjct: 223 YQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKFQAIREMLLL 282

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV  VN F+AL DLAP  S+ ++LK+LP  A LV+GLWV KSSLL +G 
Sbjct: 283 PLEERLKKWFTEVSGVNRFDALKDLAPTCSEVEILKMLPECAYLVRGLWVCKSSLLFDGV 342

Query: 146 AALYRDYLLYLFSMNPIIQTDRLR---MLTSKCTGLKSILIPLAVERRILK 3
            +   D +L  F+    + ++ L     L         IL PL   R+ILK
Sbjct: 343 YSGPMDRILLEFTKRDPVPSNILEPFINLIGNRAMRDWILSPLCKRRQILK 393


>gb|EMS67664.1| DNA-directed RNA polymerase III subunit RPC5 [Triticum urartu]
          Length = 590

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 327
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   ++ ++R +LSL
Sbjct: 196 YEPAGSDVASKYYAEMVASEGRPIDFTMSTHDYALSLCPGGPTGSKNINRSQAIREMLSL 255

Query: 326 PLEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGE 147
           PLE+RLKKWF+EV QV  F AL+ LAPD S+ED+L+ LP YADLV+GLWV +SSLL++  
Sbjct: 256 PLEERLKKWFTEVSQVTRFVALMHLAPDCSEEDLLETLPVYADLVRGLWVCRSSLLYDDG 315

Query: 146 AALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVER 15
            A  RD ++  F+    I    +  L         IL PL   R
Sbjct: 316 LASKRDQIMLEFTKMESIPVKYVERLIRDERTRNMILNPLGKRR 359


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  119 bits (298), Expect = 4e-25
 Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           YH   S  +  Y +KM+  D   I F +   DY+N+L PGTS ++  +   S R LLSLP
Sbjct: 280 YHGARSDISMSYVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNGPS-RVLLSLP 337

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLH---E 153
           LE+R + W  +   ++ F+AL  LAPD+S ED+L VL  +A LVQGLW+ KSSLL+   +
Sbjct: 338 LEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQ 397

Query: 152 GEAALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVER 15
           G  AL RDY+L LFS  PII   +L         ++ +L  +A ER
Sbjct: 398 GIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFER 443


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score =  118 bits (296), Expect = 7e-25
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           YH   S F+ RY +KMIA++   + F + P DY++SL P  S +  +++    R LLSLP
Sbjct: 275 YHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLP 334

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLLHEGEA 144
           L +RLKK   E   V  F+ L   APD S EDVLKVL  Y  LVQGLW  KSSLL     
Sbjct: 335 LAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDAN 394

Query: 143 AL--YRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
           +    RDY+L LFS N +I + ++         +KS L   AVER   K
Sbjct: 395 SKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFK 443


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  116 bits (291), Expect = 3e-24
 Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           Y+ ++S  + R+ Q M+++    + F + P DY++SL PGTST   + +  S ++LLSL 
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEG 150
           LE+R+KK  +E   V  F+AL   APD   E+ ++ L  YA LVQGLWV KS  L   +G
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDG 414

Query: 149 EAALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
                RD++L+LFS NP++ + ++ +  S    +K  L    VER   K
Sbjct: 415 SGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFK 463


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Cucumis sativus]
          Length = 702

 Score =  116 bits (291), Expect = 3e-24
 Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
 Frame = -2

Query: 503 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 324
           Y+ ++S  + R+ Q M+++    + F + P DY++SL PGTST   + +  S ++LLSL 
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354

Query: 323 LEKRLKKWFSEVCQVNNFNALLDLAPDSSKEDVLKVLPHYADLVQGLWVTKSSLL--HEG 150
           LE+R+KK  +E   V  F+AL   APD   E+ ++ L  YA LVQGLWV KS  L   +G
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDG 414

Query: 149 EAALYRDYLLYLFSMNPIIQTDRLRMLTSKCTGLKSILIPLAVERRILK 3
                RD++L+LFS NP++ + ++ +  S    +K  L    VER   K
Sbjct: 415 SGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFK 463