BLASTX nr result
ID: Zingiber24_contig00034987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034987
(271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454880.1| hypothetical protein SORBIDRAFT_03g000690 [S... 65 7e-09
ref|NP_001042512.1| Os01g0233500 [Oryza sativa Japonica Group] g... 65 9e-09
gb|EEE54185.1| hypothetical protein OsJ_01008 [Oryza sativa Japo... 65 9e-09
gb|EEC70248.1| hypothetical protein OsI_01039 [Oryza sativa Indi... 65 1e-08
ref|XP_004967382.1| PREDICTED: cyclin-A1-1-like [Setaria italica] 62 8e-08
ref|XP_006645684.1| PREDICTED: cyclin-A1-1-like [Oryza brachyantha] 62 1e-07
ref|XP_002455447.1| hypothetical protein SORBIDRAFT_03g010940 [S... 62 1e-07
ref|XP_006643958.1| PREDICTED: cyclin-A1-1-like [Oryza brachyantha] 61 2e-07
gb|EAY73164.1| hypothetical protein OsI_01037 [Oryza sativa Indi... 61 2e-07
gb|EAY73159.1| hypothetical protein OsI_01032 [Oryza sativa Indi... 60 3e-07
sp|Q0INT0.2|CCA13_ORYSJ RecName: Full=Cyclin-A1-3; AltName: Full... 60 3e-07
ref|XP_003566077.1| PREDICTED: cyclin-A1-1-like [Brachypodium di... 59 5e-07
gb|EXB60122.1| hypothetical protein L484_013387 [Morus notabilis] 57 2e-06
ref|XP_002457051.1| hypothetical protein SORBIDRAFT_03g000520 [S... 57 3e-06
dbj|BAJ94732.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 6e-06
ref|XP_006859067.1| hypothetical protein AMTR_s00068p00198800 [A... 55 7e-06
ref|NP_001105387.1| cyclin2 [Zea mays] gi|1399510|gb|AAC50013.1|... 55 1e-05
emb|CBI18982.3| unnamed protein product [Vitis vinifera] 55 1e-05
ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera] 55 1e-05
>ref|XP_002454880.1| hypothetical protein SORBIDRAFT_03g000690 [Sorghum bicolor]
gi|241926855|gb|EER99999.1| hypothetical protein
SORBIDRAFT_03g000690 [Sorghum bicolor]
Length = 502
Score = 65.5 bits (158), Expect = 7e-09
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSS-DTSSLPQNSVPKPAFV------ 113
S LKK A+ ++ S R S+ SA+IKP+ V D+S+ P+++VP PA V
Sbjct: 76 SAVPLKKPSLANARNASSIRGSAVKSASIKPAPPVPRLDSSTRPKHNVPVPATVHVPSRA 135
Query: 112 ACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
L PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 136 PALVPCSSFVSPARSGDSVSIDETMSTCDSMKSPDFEYID 175
>ref|NP_001042512.1| Os01g0233500 [Oryza sativa Japonica Group]
gi|75295493|sp|Q7F830.1|CCA11_ORYSJ RecName:
Full=Cyclin-A1-1; AltName: Full=G2/mitotic-specific
cyclin-A1-1; Short=CycA1;1 gi|6331695|dbj|BAA86628.1|
cyclin [Oryza sativa] gi|8467989|dbj|BAA96590.1|
putative type A-like cyclin [Oryza sativa Japonica
Group] gi|113532043|dbj|BAF04426.1| Os01g0233500 [Oryza
sativa Japonica Group]
Length = 508
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV---------PKPA 119
S A +KKG AS + G++R S+ SA+ KP+ +S S+ + SV P A
Sbjct: 78 SAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHESATQKESVLPPKVPSIVPTAA 137
Query: 118 FVACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SPEFEYID
Sbjct: 138 LAPVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPEFEYID 179
>gb|EEE54185.1| hypothetical protein OsJ_01008 [Oryza sativa Japonica Group]
Length = 497
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV---------PKPA 119
S A +KKG AS + G++R S+ SA+ KP+ +S S+ + SV P A
Sbjct: 78 SAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHESATQKESVLPPKVPSIVPTAA 137
Query: 118 FVACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SPEFEYID
Sbjct: 138 LAPVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPEFEYID 179
>gb|EEC70248.1| hypothetical protein OsI_01039 [Oryza sativa Indica Group]
Length = 506
Score = 64.7 bits (156), Expect = 1e-08
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV---------PKPA 119
S A +KKG AS + G++R S+ SA+ KP+ +S S+ + SV P A
Sbjct: 76 SAAPVKKGSLASVRNVGTNRASAVKSASTKPAPAISRHESAAQKESVLPPKVPSIVPTAA 135
Query: 118 FVACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SPEFEYID
Sbjct: 136 LAPVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPEFEYID 177
>ref|XP_004967382.1| PREDICTED: cyclin-A1-1-like [Setaria italica]
Length = 506
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAF-------- 116
S A LKK AS S R S+ SA+IKP+ +S S+ +++VP P
Sbjct: 77 SAAPLKKPSLASARSVSSVRGSAVKSASIKPAPPLSRYDSTAQKHNVPPPKVPTVLDVPS 136
Query: 115 -VACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
+ L PC+T SP S DSVS +MSTC+S++SP+ EYID
Sbjct: 137 RIPSLVPCSTFVSPGRSGDSVSVDETMSTCDSMKSPDIEYID 178
>ref|XP_006645684.1| PREDICTED: cyclin-A1-1-like [Oryza brachyantha]
Length = 538
Score = 61.6 bits (148), Expect = 1e-07
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV--PK-PAFVACLA 101
S+A LKKG S + ++R S SA KP+ +S + + SV PK P+ VA +A
Sbjct: 108 SVAPLKKGSLGSGRSASTNRASGVKSAPTKPAPAISRHEVAAQKESVLPPKVPSIVATVA 167
Query: 100 ------PCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 168 LAPAHVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPDFEYID 209
>ref|XP_002455447.1| hypothetical protein SORBIDRAFT_03g010940 [Sorghum bicolor]
gi|241927422|gb|EES00567.1| hypothetical protein
SORBIDRAFT_03g010940 [Sorghum bicolor]
Length = 505
Score = 61.6 bits (148), Expect = 1e-07
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Frame = -1
Query: 259 LKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKP---------AFVAC 107
LKK AS S R + SA+IKP+ VS S++ +++VP P +
Sbjct: 80 LKKPSLASARSVSSIRGQAVKSASIKPAPPVSRHGSAIQKHNVPPPKVPTIADVPSHAPA 139
Query: 106 LAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
L PCT L SP S D VS +MSTC+S++SP+FEYID
Sbjct: 140 LVPCTGLVSPGRSGDFVSIDDTMSTCDSMKSPDFEYID 177
>ref|XP_006643958.1| PREDICTED: cyclin-A1-1-like [Oryza brachyantha]
Length = 496
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 12/102 (11%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV--PK-PAFVACLA 101
S+A LKKG S + ++R S SA KP+ +S + + SV PK P+ VA A
Sbjct: 66 SVAPLKKGSLGSGRSASTNRASGVKSAPTKPAPAISRHEVAAQKESVLPPKVPSIVATAA 125
Query: 100 ------PCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 126 LAPAPVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPDFEYID 167
>gb|EAY73164.1| hypothetical protein OsI_01037 [Oryza sativa Indica Group]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
Frame = -1
Query: 265 ARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAFVACL------ 104
A +KKG AS + G +R S+ SA+ KP+ +S S+ PQ SV P ++ +
Sbjct: 62 APVKKGSLASGRNVGMNRVSAVKSASTKPAPAISRHESA-PQESVLPPKVLSIVPTAAPA 120
Query: 103 ---APCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 121 PVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPDFEYID 160
>gb|EAY73159.1| hypothetical protein OsI_01032 [Oryza sativa Indica Group]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Frame = -1
Query: 265 ARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV---------PKPAFV 113
A +KKG AS + G++R S+ SA+ KP+ +S S+ + SV P A
Sbjct: 17 APVKKGSLASGRNVGTNRVSAVKSASTKPASAISRHESAPQKESVLPPKVLRIVPTAAPA 76
Query: 112 ACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 77 PVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPDFEYID 116
>sp|Q0INT0.2|CCA13_ORYSJ RecName: Full=Cyclin-A1-3; AltName: Full=G2/mitotic-specific
cyclin-A1-3; Short=CycA1;3 gi|108862533|gb|ABG21983.1|
Cyclin, N-terminal domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 491
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Frame = -1
Query: 265 ARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSV---------PKPAFV 113
A +KKG AS + G++R S+ SA+ KP+ +S S+ + SV P A
Sbjct: 63 APVKKGSLASGRNVGTNRVSAVKSASTKPASAISRHESAPQKESVLPPKVLRIVPTAAPA 122
Query: 112 ACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
PC++ SP S DSVS +MSTC+S++SP+FEYID
Sbjct: 123 PVTVPCSSFVSPMHSGDSVSVDETMSTCDSMKSPDFEYID 162
>ref|XP_003566077.1| PREDICTED: cyclin-A1-1-like [Brachypodium distachyon]
Length = 510
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAFVACL---- 104
S +KKG AS + ++R S+ S + +P+ + S S+ + VP P A +
Sbjct: 83 STVPVKKGSLASARNVITNRGSAVKSVSTRPTPVTSCRGSTTQKEIVPPPKLPAAMPIVA 142
Query: 103 ---APCTTLKSPNFSVDSVSS---MSTCNSIRSPEFEYID 2
PC++ SP S DS+S+ MSTC+S++SP+FEYID
Sbjct: 143 PPIVPCSSFVSPRHSADSMSTDETMSTCDSMKSPDFEYID 182
>gb|EXB60122.1| hypothetical protein L484_013387 [Morus notabilis]
Length = 495
Score = 57.4 bits (137), Expect = 2e-06
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Frame = -1
Query: 268 IARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSD-TSSLPQNSVPKPAFVACLAPCT 92
IA++KKG A C S +S S +K ++IV S TSSLP++ P VA APC+
Sbjct: 84 IAKVKKGPLA--CTSTNS------SLNVKTNIIVPSKVTSSLPRSDETLPRTVAVPAPCS 135
Query: 91 TLKSPNFSVD-SVS---SMSTCNSIRSPEFEYID 2
SP+ S D SVS +MSTC+S +SPE EY+D
Sbjct: 136 MDMSPSKSDDVSVSLDETMSTCDSFKSPEVEYVD 169
>ref|XP_002457051.1| hypothetical protein SORBIDRAFT_03g000520 [Sorghum bicolor]
gi|241929026|gb|EES02171.1| hypothetical protein
SORBIDRAFT_03g000520 [Sorghum bicolor]
Length = 533
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Frame = -1
Query: 271 SIARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSS-------LPQNSVPK---- 125
S A LKK A+ + S R S+ SA+IKP VS SS +P VP
Sbjct: 77 SAAPLKKPYPANARNVSSIRGSAVKSASIKPGPPVSCLCSSTMQQKHNVPPPKVPTTVNV 136
Query: 124 PAFVACLAPCTTLKSPNFSVDSVS---SMSTCNSIRSPEFEYID 2
P+ L PC++ SP S DSVS +MS C+S++SP+FE+ID
Sbjct: 137 PSRAPALVPCSSFMSPGRSGDSVSMDETMSICDSMKSPDFEFID 180
>dbj|BAJ94732.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 515
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Frame = -1
Query: 265 ARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAFVACLAPC--- 95
A +KKG ++ ++R S+ SA+ KP+ + S S+ + S P P V + P
Sbjct: 89 APVKKGSLPGARNANANRGSAVKSASTKPAPVTSRHEGSVQKESAPPPRKVPTVVPIAVP 148
Query: 94 -----TTLKSPNFSVDSVSS---MSTCNSIRSPEFEYID 2
++ SP S DS+S+ MS+C+S++SP+FEYID
Sbjct: 149 AVIPFSSFVSPGHSGDSISTDETMSSCDSMKSPDFEYID 187
>ref|XP_006859067.1| hypothetical protein AMTR_s00068p00198800 [Amborella trichopoda]
gi|548863179|gb|ERN20534.1| hypothetical protein
AMTR_s00068p00198800 [Amborella trichopoda]
Length = 498
Score = 55.5 bits (132), Expect = 7e-06
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Frame = -1
Query: 262 RLKKGVSASHCDSGSSRNSSYISATIKP-SVIVSSDTS----------SLPQNSVPKPAF 116
+L+K + D+G+ N + S+ K V+ + DT LP+ P F
Sbjct: 77 KLRKAPISHVQDAGTKENRAPTSSVPKSFGVVATKDTHLSRKEEPKGPHLPRKEEPSFGF 136
Query: 115 VACLAPCTTLKSPNFSV-DSVS---SMSTCNSIRSPEFEYID 2
V LAPC + SPN S DSVS +MSTC+S++SPEFEY+D
Sbjct: 137 VEFLAPCNSNVSPNRSDGDSVSMDETMSTCDSLKSPEFEYVD 178
>ref|NP_001105387.1| cyclin2 [Zea mays] gi|1399510|gb|AAC50013.1| type A-like cyclin
[Zea mays]
Length = 502
Score = 55.1 bits (131), Expect = 1e-05
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Frame = -1
Query: 265 ARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSS-DTSSLPQNSVPKPAFV------AC 107
A LKK S ++ + R S+ SA+IKP+ VS D+SS +++VP P V
Sbjct: 80 APLKK---PSLANARTIRGSAAKSASIKPAPPVSRHDSSSEQKHNVPVPTTVHVPSRAPA 136
Query: 106 LAPCTTLKSPNFSVDSVSS---MSTCNSIRSPEFEYID 2
L P ++ SP S DSVS+ MSTC+S++SP+FEYID
Sbjct: 137 LVPYSSFVSPGRSGDSVSTDETMSTCDSMKSPDFEYID 174
>emb|CBI18982.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -1
Query: 268 IARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAFVACLAPCTT 89
I++ K+G S G + N+S S +KP+ ++ +SLP++ A PC+
Sbjct: 130 ISKAKRGSSKISRSVGITGNTSSASLNVKPTAVIPCKDTSLPKSDGTASTVTALPDPCSL 189
Query: 88 LKSPNFSVDSVS-----SMSTCNSIRSPEFEYID 2
SPN S D +S +MSTC+S +SPE EY+D
Sbjct: 190 DVSPNRS-DGISASMDETMSTCDSFKSPEVEYMD 222
>ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]
Length = 495
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -1
Query: 268 IARLKKGVSASHCDSGSSRNSSYISATIKPSVIVSSDTSSLPQNSVPKPAFVACLAPCTT 89
I++ K+G S G + N+S S +KP+ ++ +SLP++ A PC+
Sbjct: 75 ISKAKRGSSKISRSVGITGNTSSASLNVKPTAVIPCKDTSLPKSDGTASTVTALPDPCSL 134
Query: 88 LKSPNFSVDSVS-----SMSTCNSIRSPEFEYID 2
SPN S D +S +MSTC+S +SPE EY+D
Sbjct: 135 DVSPNRS-DGISASMDETMSTCDSFKSPEVEYMD 167