BLASTX nr result
ID: Zingiber24_contig00034971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034971
(921 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264... 268 2e-69
ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I sub... 253 9e-65
gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RP... 252 1e-64
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin... 251 4e-64
gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 ... 249 8e-64
ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Popu... 246 9e-63
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm... 245 1e-62
ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citr... 243 7e-62
ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I sub... 241 2e-61
gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like ... 241 2e-61
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub... 241 4e-61
ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Popu... 237 5e-60
ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutr... 236 9e-60
ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, part... 235 2e-59
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub... 234 3e-59
ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arab... 233 8e-59
ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago ... 229 8e-58
ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thalia... 228 3e-57
gb|AAK93576.1| unknown protein [Arabidopsis thaliana] 226 9e-57
ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248... 222 1e-55
>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
gi|302142630|emb|CBI19833.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 268 bits (686), Expect = 2e-69
Identities = 141/210 (67%), Positives = 170/210 (80%), Gaps = 3/210 (1%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGL+V++A+L+VYVHPSK+N+V +A+LR+LSSLLF +EIFDGVVLAY+V+IPSK AK+
Sbjct: 1 MEGLRVSDANLIVYVHPSKANRVSQAILRELSSLLFKFNEIFDGVVLAYDVDIPSKDAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GV++KA LLLFSPKP+ML+ GKVVKL +ESIH+VVLGFSSA I E+IR EF
Sbjct: 61 LPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIRGEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYKIKHGE VF S SHKRHVIK G+MIRF VKSLDEEILHISGSL P +TG I WL K
Sbjct: 121 KYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKK- 179
Query: 544 TEDGSYADRSLK---TSDIQREMQEEGTLN 624
ED S + RS K + REMQE T++
Sbjct: 180 LEDASPSSRSTKKRRENGESREMQEHDTVD 209
>ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cicer
arietinum]
Length = 232
Score = 253 bits (645), Expect = 9e-65
Identities = 129/192 (67%), Positives = 155/192 (80%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++A+LVVY+HPSKS QV AVLR+LSS+LF ++EIFDG+VLAY+VN K A++
Sbjct: 1 MEGLKVSKANLVVYIHPSKSRQVSNAVLRELSSMLFAYNEIFDGIVLAYDVNSFDKCARI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GVK+K N+LLFSPKP MLL GKVVKL ESIHVVVLGF+SA I +DIR+EF
Sbjct: 61 LPGIYPYFGVKLKVNMLLFSPKPDMLLEGKVVKLTHESIHVVVLGFASAVITEKDIRKEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
Y+ KHG+ V+AS SHKRHVIK G+MIRF VKS DEEILHI GSL+P NTG I WL K+
Sbjct: 121 VYRTKHGQDVYASKSHKRHVIKVGTMIRFSVKSFDEEILHIYGSLVPDNTGSIHWLDKN- 179
Query: 544 TEDGSYADRSLK 579
E S +DRS K
Sbjct: 180 LEVVSLSDRSTK 191
>gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RPA43 [Morus
notabilis]
Length = 234
Score = 252 bits (644), Expect = 1e-64
Identities = 134/206 (65%), Positives = 162/206 (78%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
ME LKV+EA +VVYVHPSKS ++ AVLR+LSSLLF DE FDGVVLAYE +I K AK+
Sbjct: 1 MECLKVSEAKMVVYVHPSKSTKIYDAVLRELSSLLFKFDENFDGVVLAYEFDILDKSAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PYIGV+IKA LLLFSPKP MLL G+VVK+ + SIHV+VLGF+SA I E+IR+EF
Sbjct: 61 LSGIHPYIGVRIKAKLLLFSPKPDMLLEGRVVKVTQGSIHVIVLGFASAVITEEEIRDEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
YKIKH E VF+S HK H IK G+MIRF VKSLDEEILHISGSL+P++TGCI+WL+KH
Sbjct: 121 VYKIKHEEEVFSSKFHKHHTIKVGTMIRFLVKSLDEEILHISGSLIPAHTGCIRWLAKH- 179
Query: 544 TEDGSYADRSLKTSDIQREMQEEGTL 621
+D + RS K +RE +EE L
Sbjct: 180 LDDDTITGRSKKK---RRENEEESIL 202
>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
gi|571541492|ref|XP_006601777.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X1 [Glycine
max] gi|571541496|ref|XP_006601778.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X2 [Glycine
max] gi|255631830|gb|ACU16282.1| unknown [Glycine max]
Length = 232
Score = 251 bits (640), Expect = 4e-64
Identities = 136/209 (65%), Positives = 163/209 (77%), Gaps = 2/209 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++A+L VY+HPSKSNQV +AVLRQLSSLLFT EIFDGVVLAY+VN AK+
Sbjct: 1 MEGLKVSKANLTVYIHPSKSNQVSQAVLRQLSSLLFTFSEIFDGVVLAYDVNSFDTCAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PY GVK+K NLLLFSPKP+MLL GKVVK+ +ESIHVVVLGFSSA I +DIREEF
Sbjct: 61 LSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K K G+ V+ S SHKRHVIK G+MIRF VKS DEEILH+ GSL+P +TG I WL K+
Sbjct: 121 VCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKN- 179
Query: 544 TEDGSYADRSLKTSDI--QREMQEEGTLN 624
E S++DRS K I +R M E+ ++
Sbjct: 180 LEVDSHSDRSEKKRRIVPERIMLEQDAVD 208
>gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao]
Length = 243
Score = 249 bits (637), Expect = 8e-64
Identities = 134/210 (63%), Positives = 162/210 (77%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
M+GL VA+ADLVVYVHPSKS +V +A+LR+LSSLLF +E FDGV+LAY+VNI K+AK+
Sbjct: 17 MKGLSVADADLVVYVHPSKSRKVSQAILRELSSLLFKFNEAFDGVLLAYDVNIQDKQAKI 76
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PY G+++KANLLLFSPK MLL GKVVKL +ESIHV++LGFSSA I ++IR EF
Sbjct: 77 LSGVHPYFGLRLKANLLLFSPKSDMLLEGKVVKLSQESIHVIILGFSSAIITAQNIRGEF 136
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYK K E +FAS SHKRHVIK G+MIRF VKS DEEILHI GSL+P++TG I WL
Sbjct: 137 KYKTKDEEELFASRSHKRHVIKVGTMIRFLVKSFDEEILHIIGSLMPAHTGSICWLD-WN 195
Query: 544 TEDGSYADRSLKTSDIQREMQEEGTLNTTT 633
E+ S DRS T RE QE+ T TT
Sbjct: 196 LEEISEFDRS-ATKSRGREWQEDKTFEGTT 224
>ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Populus trichocarpa]
gi|550339753|gb|EEE93911.2| hypothetical protein
POPTR_0005s25810g [Populus trichocarpa]
Length = 230
Score = 246 bits (628), Expect = 9e-63
Identities = 123/210 (58%), Positives = 163/210 (77%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGL ++A+L+VYVHPS+S V +A+LR+LSSLLF + + FDGVVLAY V+ K A++
Sbjct: 1 MEGLSKSDANLIVYVHPSQSKNVDKAILRELSSLLFKYSQAFDGVVLAYSVDPQDKCARI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PY GV+++ANLL+FSPKP+MLL GKVVK+ +ESIH +VLGFSSA I E+IR E
Sbjct: 61 LSGVHPYFGVRLRANLLIFSPKPNMLLEGKVVKITRESIHCIVLGFSSAIITDENIRNEL 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYK KHGE V+ S HKRHVIK G++IRF+VKSLDEEILHISGSL+P+NTG + WL K+
Sbjct: 121 KYKAKHGEGVYVSRYHKRHVIKVGAVIRFEVKSLDEEILHISGSLIPANTGSVHWLDKYF 180
Query: 544 TEDGSYADRSLKTSDIQREMQEEGTLNTTT 633
+ +++ KT + + EMQE+ T+ T
Sbjct: 181 VDAAIDSNKETKTEE-EMEMQEQITVGGET 209
>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
gi|223551211|gb|EEF52697.1| conserved hypothetical
protein [Ricinus communis]
Length = 229
Score = 245 bits (626), Expect = 1e-62
Identities = 127/213 (59%), Positives = 161/213 (75%), Gaps = 3/213 (1%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGL ++EA+LVVYVHPS+S V +A+LR+LSSLLF +E FDGVVLAY N P K+A++
Sbjct: 1 MEGLSISEANLVVYVHPSQSKNVSQAILRELSSLLFKFNENFDGVVLAYAFNAPDKQARI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GV+++A +L+FSPKP MLL GKVVK+ +ESIHV+VLGFSSA I EDIR+EF
Sbjct: 61 LCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIRDEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLS--- 534
+YK KHGE ++ S HK+HVIK G+MIRF VKSLDEE LHISGSL+P++TG I WL
Sbjct: 121 RYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEETLHISGSLVPTHTGSISWLEGDM 180
Query: 535 KHGTEDGSYADRSLKTSDIQREMQEEGTLNTTT 633
K+ T D R+ +I E+QEEGT T
Sbjct: 181 KNTTTDSGNKKRTQLDGEI--EVQEEGTAGGDT 211
>ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citrus clementina]
gi|557537269|gb|ESR48387.1| hypothetical protein
CICLE_v10002352mg [Citrus clementina]
Length = 233
Score = 243 bits (620), Expect = 7e-62
Identities = 126/208 (60%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++AD+ VY+HPSKS +V +A+LR+LSSLLF +EIF+GV+LAY+VNI K K+
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDVNILDKNGKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GVK+KA LLLFSPKP+ML+ GKVV+L + SIHV+VLGFSSA I +DIREEF
Sbjct: 61 LFGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
Y K+GE VFAS SHKRHVIK G+MIRF VKS DEEILHISGSL P++TG I+WL K
Sbjct: 121 NYTTKYGEEVFASRSHKRHVIKVGTMIRFLVKSFDEEILHISGSLKPAHTGSIRWLDKKS 180
Query: 544 TEDGSYADRSLKTSDIQ--REMQEEGTL 621
+ K +++ EMQ+ T+
Sbjct: 181 KNVCLADSSTTKRREVEGKSEMQDNETV 208
>ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Citrus sinensis]
Length = 233
Score = 241 bits (616), Expect = 2e-61
Identities = 125/208 (60%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++AD+ VY+HPSKS +V +A+LR+LSSLLF +EIF+GV+LAY+VNI K K+
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDVNILDKNGKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GVK+KA LLLFSPKP+ML+ GKVV+L + SIHV+VLGFSSA I +DIREEF
Sbjct: 61 LCGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
Y K+GE VFAS SHK HVIK G+MIRF VKS DEEILHISGSL+P+ TG I+WL K
Sbjct: 121 NYTTKYGEEVFASRSHKWHVIKVGTMIRFLVKSFDEEILHISGSLIPARTGSIRWLDKKS 180
Query: 544 TEDGSYADRSLKTSDIQ--REMQEEGTL 621
+ K +++ EMQ+ T+
Sbjct: 181 KNVCLADSSTTKRREVEGKSEMQDNETV 208
>gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like protein [Phaseolus
vulgaris] gi|561012820|gb|ESW11681.1| hypothetical
protein PHAVU_008G050600g [Phaseolus vulgaris]
Length = 232
Score = 241 bits (616), Expect = 2e-61
Identities = 133/209 (63%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
ME LKV++A+L VY+HPSKSNQV +AVLR+LSSLLFT EI GVVLAY+VN AK+
Sbjct: 1 MEWLKVSKANLTVYIHPSKSNQVSKAVLRELSSLLFTFSEIVGGVVLAYDVNSLDTCAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY+GVK+KANLLLF PKP+ LL GKVVKL +ESIHVVVLGFS+A I +DIREEF
Sbjct: 61 LPGVHPYLGVKLKANLLLFCPKPNTLLEGKVVKLTQESIHVVVLGFSAAIITEKDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K K G+ V+AS S+KRHVIK G+MIRF VKS DEEILHI GSL+P +TG I WL K+
Sbjct: 121 VCKTKKGQEVYASRSNKRHVIKVGTMIRFLVKSFDEEILHICGSLIPDHTGSIYWLDKN- 179
Query: 544 TEDGSYADRSLKTSDIQRE--MQEEGTLN 624
E S+ADRS K I+ E M E+G ++
Sbjct: 180 LEVVSHADRSEKKKRIEPERIMLEQGAVD 208
>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
[Cucumis sativus] gi|449476884|ref|XP_004154864.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like [Cucumis sativus]
Length = 231
Score = 241 bits (614), Expect = 4e-61
Identities = 118/182 (64%), Positives = 147/182 (80%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++A++VVYVHPSKS ++ +AVLR+L ++L DE F+GV+LAYE I K AK+
Sbjct: 1 MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PY GV IKA LLLFSPKP+MLL GKVVKL +ESIHV+VLGF+SA I EDIR+EF
Sbjct: 61 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K++ KHGE +F S +HK H+IK G+MIR VKS DEEILHISGSL+PS+TG I WL K+
Sbjct: 121 KHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180
Query: 544 TE 549
E
Sbjct: 181 VE 182
>ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Populus trichocarpa]
gi|550344135|gb|EEE81261.2| hypothetical protein
POPTR_0002s02620g [Populus trichocarpa]
Length = 232
Score = 237 bits (604), Expect = 5e-60
Identities = 118/204 (57%), Positives = 157/204 (76%), Gaps = 1/204 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGL + ADL+VY HPS+S V +A+LR+LSSLLF + + FDGVVLAY V K A++
Sbjct: 1 MEGLSKSVADLIVYEHPSQSKDVDKAILRELSSLLFKYSQAFDGVVLAYSVEPQDKCARI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SG+ PY GV+++AN+L+FSPKP+MLL GKVVKL +ESIH +VLGFSSA + E+IR E
Sbjct: 61 LSGVHPYFGVRLQANMLIFSPKPNMLLEGKVVKLTRESIHCIVLGFSSAIVTDENIRNEL 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYK KHGE V+ S HKRHVIK G+++RF VKSLDEEILHISGSL+P+NTG + WL K+
Sbjct: 121 KYKSKHGEGVYVSRYHKRHVIKVGAVLRFVVKSLDEEILHISGSLIPANTGSVHWLDKYY 180
Query: 544 TEDGSYADRSLKTS-DIQREMQEE 612
+ G+ +++ + + + EMQE+
Sbjct: 181 VDAGTDSNKKARRQIEEEVEMQEQ 204
>ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutrema salsugineum]
gi|557086719|gb|ESQ27571.1| hypothetical protein
EUTSA_v10019169mg [Eutrema salsugineum]
Length = 196
Score = 236 bits (602), Expect = 9e-60
Identities = 113/196 (57%), Positives = 152/196 (77%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLK+++A+L+VY+HPSK V +A+ R+LS+LLF +DE FDGV+LAY+ + SK+AK+
Sbjct: 1 MEGLKLSDAELMVYIHPSKCRNVFQAICRELSALLFQYDETFDGVLLAYDFTVESKQAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
++GL PY GV+I LLLF PKP+ L+ GK+VK+ ESIHVVVLGFS+A I DIREEF
Sbjct: 61 LAGLNPYFGVRINTKLLLFDPKPNSLVEGKIVKISPESIHVVVLGFSAAVITDIDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYK++ GE F S SHKRH +K G+M+R QV+S DEE+LHI+GSL+P+NTGC++WL K
Sbjct: 121 KYKMRDGEGCFVSRSHKRHALKVGTMLRLQVESFDEEVLHIAGSLMPANTGCVKWLEKQ- 179
Query: 544 TEDGSYADRSLKTSDI 591
+E+ + DR K I
Sbjct: 180 SEEALHMDRDHKRRKI 195
>ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, partial [Capsella rubella]
gi|482571392|gb|EOA35580.1| hypothetical protein
CARUB_v10020789mg, partial [Capsella rubella]
Length = 270
Score = 235 bits (600), Expect = 2e-59
Identities = 109/182 (59%), Positives = 144/182 (79%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLK++EA+L+VY+HPSKS V +A+ R+LSSLLF + E FDGV+LAY+ + SK+AK+
Sbjct: 75 MEGLKLSEAELMVYIHPSKSRNVFQAICRELSSLLFQYTETFDGVLLAYDATVKSKQAKI 134
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+SGL PY GV++ LLLF PKP L+ G++VK+ ESIHVVVLGFS+A + DIREEF
Sbjct: 135 LSGLHPYFGVRVNTRLLLFDPKPKSLVEGEIVKISPESIHVVVLGFSAAVVTDLDIREEF 194
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K+++K GE F S SHKRH +K G+++R QV+S DEE+LHI+GSLLP NTGC++WL KH
Sbjct: 195 KFRVKDGEGCFVSRSHKRHALKLGTILRLQVQSFDEEVLHIAGSLLPENTGCVKWLEKHS 254
Query: 544 TE 549
E
Sbjct: 255 EE 256
>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Glycine max] gi|571479213|ref|XP_006587794.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like isoform X2 [Glycine max]
gi|571479215|ref|XP_006587795.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa43-like isoform X3 [Glycine
max]
Length = 232
Score = 234 bits (598), Expect = 3e-59
Identities = 127/209 (60%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++A+L Y+HPSK+NQV + +LRQLSSLLF EIF GVVLAY++N AK+
Sbjct: 1 MEGLKVSKANLTAYIHPSKTNQVSQPILRQLSSLLFKFSEIFHGVVLAYDLNSLHTCAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GVK+K NLLLFSPKP+MLL GKVVK+ +ESIHVVVLGFSSA I +DIREEF
Sbjct: 61 LPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIITEKDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K K G+ V+AS SHK+HVIK G+MIRF VKS DEEILH+ GSL+P +TG I WL K+
Sbjct: 121 VCKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKN- 179
Query: 544 TEDGSYADRSLKTSDI--QREMQEEGTLN 624
E S+ RS K I +R M E+ ++
Sbjct: 180 LEADSHVYRSKKKRRIVPERIMLEQDAVD 208
>ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arabidopsis lyrata subsp.
lyrata] gi|297334877|gb|EFH65295.1| hypothetical protein
ARALYDRAFT_316494 [Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 233 bits (594), Expect = 8e-59
Identities = 109/196 (55%), Positives = 151/196 (77%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLK++EA+L++Y+HPSKS V +A+ R+LSSLLF ++E FDGV+LAY+ + SK+AK+
Sbjct: 1 MEGLKLSEAELMIYIHPSKSRNVFQAICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
++GL PY GV++ LLLF PKP + GK+VK+ ESIHV+VLGFS+A I DIREEF
Sbjct: 61 LAGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KY+++ GE F S SHKRH +K G+M+R QV+S DEE++HI+GSLLP NTGC++WL ++
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWL-ENK 179
Query: 544 TEDGSYADRSLKTSDI 591
+E+ + DR K I
Sbjct: 180 SEEALHTDRDHKRRKI 195
>ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago truncatula]
gi|124361023|gb|ABN08995.1| Nucleic acid-binding,
OB-fold [Medicago truncatula]
gi|355499256|gb|AES80459.1| hypothetical protein
MTR_7g080860 [Medicago truncatula]
gi|388494038|gb|AFK35085.1| unknown [Medicago
truncatula]
Length = 228
Score = 229 bits (585), Expect = 8e-58
Identities = 121/192 (63%), Positives = 151/192 (78%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLKV++++LVVY+HPS+SNQV +AVLR+LS+LLFT+DEIFDGVVLAY V+ K AKV
Sbjct: 1 MEGLKVSKSNLVVYIHPSQSNQVSKAVLRELSTLLFTYDEIFDGVVLAYYVDSLDKCAKV 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GV +K N+LLFSPKP MLL GKV K+ E I V+VLGF++A I +DIR EF
Sbjct: 61 LPGVYPYFGVNLKVNMLLFSPKPDMLLEGKVEKVTPEVIIVIVLGFATAIITEKDIRGEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
K+ +KHG VFAS HKRHVIK G+M+RF VKS DEE +++ GSL+P NTG IQWL K+
Sbjct: 121 KFTMKHG--VFASKYHKRHVIKKGTMLRFSVKSFDEEQIYVYGSLVPDNTGNIQWLDKN- 177
Query: 544 TEDGSYADRSLK 579
E S+ DRS K
Sbjct: 178 LEVVSHTDRSTK 189
>ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|42572115|ref|NP_974148.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|23297345|gb|AAN12946.1|
unknown protein [Arabidopsis thaliana]
gi|332197622|gb|AEE35743.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|332197623|gb|AEE35744.1|
DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 196
Score = 228 bits (580), Expect = 3e-57
Identities = 103/182 (56%), Positives = 142/182 (78%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLK++EA+L++++HPS+S V + + R+LSSLLF ++E FDGV+LAY+ + SK+AK+
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
++GL PY GV++ LLLF PKP + GK+VK+ ESIHV+VLGFS+A I DIREEF
Sbjct: 61 LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KY+++ GE F S SHKRH +K G+M+R QV+S DEE++HI+GSLLP NTGC++WL K
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180
Query: 544 TE 549
E
Sbjct: 181 EE 182
>gb|AAK93576.1| unknown protein [Arabidopsis thaliana]
Length = 196
Score = 226 bits (576), Expect = 9e-57
Identities = 102/182 (56%), Positives = 141/182 (77%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
MEGLK++EA+L++++HPS+S V + + R+LSSLLF ++E FDGV+LAY+ + SK+AK+
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
++GL PY GV++ LLLF PKP + GK+ K+ ESIHV+VLGFS+A I DIREEF
Sbjct: 61 LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIAKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KY+++ GE F S SHKRH +K G+M+R QV+S DEE++HI+GSLLP NTGC++WL K
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180
Query: 544 TE 549
E
Sbjct: 181 EE 182
>ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248579 [Solanum
lycopersicum]
Length = 231
Score = 222 bits (566), Expect = 1e-55
Identities = 110/187 (58%), Positives = 139/187 (74%)
Frame = +1
Query: 4 MEGLKVAEADLVVYVHPSKSNQVRRAVLRQLSSLLFTHDEIFDGVVLAYEVNIPSKRAKV 183
ME LK A+L+VY+HPS + V AV R+LSSLLF +E DGVVL YE S A++
Sbjct: 1 MEALKECRANLLVYLHPSNAKNVETAVYRELSSLLFKFNEALDGVVLTYEPKFSSNLARI 60
Query: 184 ISGLIPYIGVKIKANLLLFSPKPSMLLGGKVVKLGKESIHVVVLGFSSAAIMLEDIREEF 363
+ G+ PY GVK++A LLLF+PKP MLL G+VVK+G++SIH+VVLGFSSA I EDIRE+F
Sbjct: 61 LPGIHPYFGVKLEAKLLLFNPKPEMLLEGEVVKVGQQSIHIVVLGFSSAVIADEDIREDF 120
Query: 364 KYKIKHGEVVFASSSHKRHVIKAGSMIRFQVKSLDEEILHISGSLLPSNTGCIQWLSKHG 543
KYKIKHG+ VF S S+K+H IK G+ +RF VK+ DEEILH+ GSL+P NTG IQWL
Sbjct: 121 KYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHMCGSLIPDNTGNIQWLETKA 180
Query: 544 TEDGSYA 564
E +Y+
Sbjct: 181 EESQAYS 187