BLASTX nr result

ID: Zingiber24_contig00034892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034892
         (684 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [A...    74   4e-11
ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    62   2e-07
ref|XP_006842414.1| hypothetical protein AMTR_s05659p00000220 [A...    61   4e-07
gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) ...    59   1e-06
ref|XP_006854832.1| hypothetical protein AMTR_s00063p00206020 [A...    58   3e-06

>ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
           gi|548858539|gb|ERN16302.1| hypothetical protein
           AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = -3

Query: 268 DTVALPWGRASPDFYRSLVRPPNEN*GPCAGLSSLRLACSVWSVPWFLECQPQRG 104
           DT+ALPWGR SPDF+RSLVRPPNEN GPC GL SLRLA  ++ VP        RG
Sbjct: 18  DTIALPWGRGSPDFHRSLVRPPNENLGPCTGLLSLRLA--LYGVPHGFSSASHRG 70



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/52 (67%), Positives = 37/52 (71%)
 Frame = -1

Query: 156 LALYGVXXXXXXXXXREECHQLGRYLPLTTRSPAARAPRFKFVILTLSPALP 1
           LALYGV         R ECHQLGRY PLTTRSPAARAPRF FV+L +S A P
Sbjct: 54  LALYGVPHGFSSASHRGECHQLGRYWPLTTRSPAARAPRFNFVMLIVSSAPP 105


>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 MPSTRALFATNHSLAGRSGSAFQVRYPNPLPCST 2
           MPSTRAL ATNHSLAGR GSAFQVRYPN L CST
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCST 34


>ref|XP_006842414.1| hypothetical protein AMTR_s05659p00000220 [Amborella trichopoda]
           gi|548844497|gb|ERN04089.1| hypothetical protein
           AMTR_s05659p00000220 [Amborella trichopoda]
          Length = 102

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 36/57 (63%), Positives = 39/57 (68%)
 Frame = +2

Query: 224 IEVGASPSPWQRYSVLREEFRGLIVARTSFSF*VMRRGPVLDRTVIQQ*KDKRRSQR 394
           +EVGA+PSPWQR SVLREEFRGLIVARTSF F    +G           KD RRSQR
Sbjct: 1   MEVGATPSPWQRNSVLREEFRGLIVARTSF-FLGHAKGASPRSYCSSTKKDNRRSQR 56



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 29/45 (64%)
 Frame = +1

Query: 313 FILGHAKGASP*SYSYSTMKRQETLSTARRHSLDELFQLLHSFVP 447
           F LGHAKGASP SY  ST K        RRHSL E FQLLH FVP
Sbjct: 30  FFLGHAKGASPRSYCSSTKKDNRRSQRRRRHSLSEFFQLLHDFVP 74


>gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) [Raphanus sativus]
          Length = 92

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -3

Query: 103 MPSTRALFATNHSLAGRSGSAFQVRYPNPLPCST 2
           MPSTRAL ATNHSLA RSGSAFQVRYPN   CST
Sbjct: 1   MPSTRALLATNHSLASRSGSAFQVRYPNRPLCST 34


>ref|XP_006854832.1| hypothetical protein AMTR_s00063p00206020 [Amborella trichopoda]
           gi|548858536|gb|ERN16299.1| hypothetical protein
           AMTR_s00063p00206020 [Amborella trichopoda]
          Length = 113

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -3

Query: 103 MPSTRALFATNHSLAGRSGSAFQVRYPNPLPCST 2
           MPSTRAL ATNHSL GRS S FQ+RYPN L CST
Sbjct: 1   MPSTRALLATNHSLTGRSSSTFQLRYPNRLLCST 34


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